RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 OR2G2Q8NGZ5 317 aa14.55□□□□□ -0.08
COL7A1-202ENST00000422991 HAVCR2Q8TDQ0 301 aa14.55□□□□□ -0.08
COL7A1-202ENST00000422991 PPP1R14AQ96A00 147 aa14.55□□□□□ -0.08
COL7A1-202ENST00000422991 SGK3Q96BR1 496 aa14.55□□□□□ -0.08
COL7A1-202ENST00000422991 HAVCR1Q96D42 359 aa14.55□□□□□ -0.08
COL7A1-202ENST00000422991 REEP6Q96HR9 211 aa14.55□□□□□ -0.08
COL7A1-202ENST00000422991 REPIN1Q9BWE0 567 aaKnown RBP14.55□□□□□ -0.08
COL7A1-202ENST00000422991 RGCCQ9H4X1 137 aa14.55□□□□□ -0.08
COL7A1-202ENST00000422991 ZNF391Q9UJN7 358 aa14.55□□□□□ -0.08
COL7A1-202ENST00000422991 LAMP3Q9UQV4 416 aa14.55□□□□□ -0.08
COL7A1-202ENST00000422991 hCG_38984A0A1B0GV85 526 aa14.54□□□□□ -0.08
COL7A1-202ENST00000422991 A0A1W2PPW3 197 aa14.54□□□□□ -0.08
COL7A1-202ENST00000422991 E9PI62 339 aa14.54□□□□□ -0.08
COL7A1-202ENST00000422991 IGLV3-1P01715 115 aa14.54□□□□□ -0.08
COL7A1-202ENST00000422991 CFL1P23528 166 aaKnown RBP14.54□□□□□ -0.08
COL7A1-202ENST00000422991 EEF1B2P24534 225 aaKnown RBP14.54□□□□□ -0.08
COL7A1-202ENST00000422991 TGM4P49221 684 aa14.54□□□□□ -0.08
COL7A1-202ENST00000422991 GBX2P52951 348 aaPredicted RBP14.54□□□□□ -0.08
COL7A1-202ENST00000422991 PRSS12P56730 875 aa14.54□□□□□ -0.08
COL7A1-202ENST00000422991 NANOS3P60323 173 aaKnown RBP14.54□□□□□ -0.08
COL7A1-202ENST00000422991 SNRPD2P62316 118 aaKnown RBP14.54□□□□□ -0.08
COL7A1-202ENST00000422991 ALKBH6Q3KRA9 238 aa14.54□□□□□ -0.08
COL7A1-202ENST00000422991 KCTD21Q4G0X4 260 aa14.54□□□□□ -0.08
COL7A1-202ENST00000422991 WDR38Q5JTN6 314 aa14.54□□□□□ -0.08
COL7A1-202ENST00000422991 PGAP1Q75T13 922 aa14.54□□□□□ -0.08
COL7A1-202ENST00000422991 LURAP1LQ8IV03 231 aa14.54□□□□□ -0.08
COL7A1-202ENST00000422991 OR51E1Q8TCB6 317 aa14.54□□□□□ -0.08
COL7A1-202ENST00000422991 LYZL4Q96KX0 146 aa14.54□□□□□ -0.08
COL7A1-202ENST00000422991 CCL19Q99731 98 aa14.54□□□□□ -0.08
COL7A1-202ENST00000422991 MND1Q9BWT6 205 aa14.54□□□□□ -0.08
COL7A1-202ENST00000422991 PURGQ9UJV8 347 aaKnown RBP14.54□□□□□ -0.08
COL7A1-202ENST00000422991 SLC22A13Q9Y226 551 aa14.54□□□□□ -0.08
COL7A1-202ENST00000422991 ERGIC3Q9Y282 383 aa14.54□□□□□ -0.08
COL7A1-202ENST00000422991 TRIM64A6NGJ6 449 aa14.53□□□□□ -0.08
COL7A1-202ENST00000422991 RAF1P04049 648 aa14.53□□□□□ -0.08
COL7A1-202ENST00000422991 CD53P19397 219 aa14.53□□□□□ -0.08
COL7A1-202ENST00000422991 CCR9P51686 369 aa14.53□□□□□ -0.08
COL7A1-202ENST00000422991 WNT4P56705 351 aa14.53□□□□□ -0.08
COL7A1-202ENST00000422991 FAM3AP98173 230 aa14.53□□□□□ -0.08
COL7A1-202ENST00000422991 ALKBH1Q13686 389 aaKnown RBP14.53□□□□□ -0.08
COL7A1-202ENST00000422991 DOC2BQ14184 412 aa14.53□□□□□ -0.08
COL7A1-202ENST00000422991 OR2T2Q6IF00 324 aa14.53□□□□□ -0.08
COL7A1-202ENST00000422991 KLBQ86Z14 1044 aa14.53□□□□□ -0.08
COL7A1-202ENST00000422991 GATAD2BQ8WXI9 593 aa14.53□□□□□ -0.08
COL7A1-202ENST00000422991 CCDC90BQ9GZT6 254 aa14.53□□□□□ -0.08
COL7A1-202ENST00000422991 GPR84Q9NQS5 396 aa14.53□□□□□ -0.08
COL7A1-202ENST00000422991 BABAM2Q9NXR7 383 aa14.53□□□□□ -0.08
COL7A1-202ENST00000422991 FRRS1LQ9P0K9 344 aa14.53□□□□□ -0.08
COL7A1-202ENST00000422991 TAAR3PQ9P1P4 343 aa14.53□□□□□ -0.08
COL7A1-202ENST00000422991 ST6GALNAC2Q9UJ37 374 aa14.53□□□□□ -0.08
COL7A1-202ENST00000422991 LSM2Q9Y333 95 aaKnown RBP14.53□□□□□ -0.08
COL7A1-202ENST00000422991 OR4C45A6NMZ5 311 aa14.52□□□□□ -0.09
COL7A1-202ENST00000422991 IQCF6A8MYZ5 107 aa14.52□□□□□ -0.09
COL7A1-202ENST00000422991 M0R233 179 aa14.52□□□□□ -0.09
COL7A1-202ENST00000422991 TIMM8AO60220 97 aaPredicted RBP14.52□□□□□ -0.09
COL7A1-202ENST00000422991 MRPS14O60783 128 aaKnown RBP14.52□□□□□ -0.09
COL7A1-202ENST00000422991 LALBAP00709 142 aa14.52□□□□□ -0.09
COL7A1-202ENST00000422991 SELEP16581 610 aa14.52□□□□□ -0.09
COL7A1-202ENST00000422991 ALDH3B1P43353 468 aa14.52□□□□□ -0.09
COL7A1-202ENST00000422991 GSK3AP49840 483 aa14.52□□□□□ -0.09
COL7A1-202ENST00000422991 GTF2A1P52655 376 aaPredicted RBP14.52□□□□□ -0.09
COL7A1-202ENST00000422991 CHN2P52757 468 aa14.52□□□□□ -0.09
COL7A1-202ENST00000422991 OR8B8Q15620 311 aa14.52□□□□□ -0.09
COL7A1-202ENST00000422991 MOGQ16653 247 aa14.52□□□□□ -0.09
COL7A1-202ENST00000422991 NKPD1Q17RQ9 610 aa14.52□□□□□ -0.09
COL7A1-202ENST00000422991 CCDC58Q4VC31 144 aa14.52□□□□□ -0.09
COL7A1-202ENST00000422991 XAF1Q6GPH4 301 aa14.52□□□□□ -0.09
COL7A1-202ENST00000422991 OR56B2PQ8NGI1 322 aa14.52□□□□□ -0.09
COL7A1-202ENST00000422991 RPS4Y2Q8TD47 263 aa14.52□□□□□ -0.09
COL7A1-202ENST00000422991 SOX7Q9BT81 388 aa14.52□□□□□ -0.09
COL7A1-202ENST00000422991 TRIM36Q9NQ86 728 aa14.52□□□□□ -0.09
COL7A1-202ENST00000422991 CGGBP1Q9UFW8 167 aaPredicted RBP14.52□□□□□ -0.09
COL7A1-202ENST00000422991 FBXO9Q9UK97 447 aaPredicted RBP14.52□□□□□ -0.09
COL7A1-202ENST00000422991 PLEKHA6Q9Y2H5 1048 aa14.52□□□□□ -0.09
COL7A1-202ENST00000422991 A0A1B0GTI1 187 aa14.51□□□□□ -0.09
COL7A1-202ENST00000422991 GGT3PA6NGU5 568 aa14.51□□□□□ -0.09
COL7A1-202ENST00000422991 CD300LBA8K4G0 201 aa14.51□□□□□ -0.09
COL7A1-202ENST00000422991 OVOL3O00110 214 aa14.51□□□□□ -0.09
COL7A1-202ENST00000422991 P2RY10O00398 339 aa14.51□□□□□ -0.09
COL7A1-202ENST00000422991 LILRA1O75019 489 aa14.51□□□□□ -0.09
COL7A1-202ENST00000422991 UBCP0CG48 685 aaKnown RBP14.51□□□□□ -0.09
COL7A1-202ENST00000422991 CCL1P22362 96 aa14.51□□□□□ -0.09
COL7A1-202ENST00000422991 PPOXP50336 477 aa14.51□□□□□ -0.09
COL7A1-202ENST00000422991 MMP15P51511 669 aa14.51□□□□□ -0.09
COL7A1-202ENST00000422991 CDH15P55291 814 aa14.51□□□□□ -0.09
COL7A1-202ENST00000422991 TNK1Q13470 666 aa14.51□□□□□ -0.09
COL7A1-202ENST00000422991 CDK5R1Q15078 307 aa14.51□□□□□ -0.09
COL7A1-202ENST00000422991 TBCEQ15813 527 aaPredicted RBP14.51□□□□□ -0.09
COL7A1-202ENST00000422991 RPL22L1Q6P5R6 122 aaKnown RBP14.51□□□□□ -0.09
COL7A1-202ENST00000422991 COMMD2Q86X83 199 aa14.51□□□□□ -0.09
COL7A1-202ENST00000422991 OR5AS1Q8N127 324 aa14.51□□□□□ -0.09
COL7A1-202ENST00000422991 GTF3AQ92664 365 aaKnown RBP14.51□□□□□ -0.09
COL7A1-202ENST00000422991 OR5M11Q96RB7 305 aa14.51□□□□□ -0.09
COL7A1-202ENST00000422991 CACNG6Q9BXT2 260 aa14.51□□□□□ -0.09
COL7A1-202ENST00000422991 DYNLRB1Q9NP97 96 aa14.51□□□□□ -0.09
COL7A1-202ENST00000422991 GPR160Q9UJ42 338 aa14.51□□□□□ -0.09
COL7A1-202ENST00000422991 LOC107986453A0A1B0GWG9 222 aa14.5□□□□□ -0.09
COL7A1-202ENST00000422991 LOC390937A0A1W2PQ73 354 aa14.5□□□□□ -0.09
COL7A1-202ENST00000422991 ZSCAN5BA6NJL1 495 aa14.5□□□□□ -0.09
COL7A1-202ENST00000422991 H7C417 338 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms