RNA–Protein interactions for RNA: ENST00000422070.8

RBFOX1-204, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-204ENST00000422070 FAM240BA0A1B0GVZ2 78 aa16.46■□□□□ 0.23
RBFOX1-204ENST00000422070 C5orf63A6NC05 138 aa16.46■□□□□ 0.23
RBFOX1-204ENST00000422070 CENPXA8MT69 81 aa16.46■□□□□ 0.23
RBFOX1-204ENST00000422070 BPNT1O95861 308 aa16.46■□□□□ 0.23
RBFOX1-204ENST00000422070 ECDO95905 644 aaPredicted RBP16.46■□□□□ 0.23
RBFOX1-204ENST00000422070 TMIGD3P0DMS9 266 aaPredicted RBP16.46■□□□□ 0.23
RBFOX1-204ENST00000422070 EFNB2P52799 333 aa16.46■□□□□ 0.23
RBFOX1-204ENST00000422070 PLA2G7Q13093 441 aa16.46■□□□□ 0.23
RBFOX1-204ENST00000422070 KLF9Q13886 244 aaPredicted RBP16.46■□□□□ 0.23
RBFOX1-204ENST00000422070 SNAI3Q3KNW1 292 aa16.46■□□□□ 0.23
RBFOX1-204ENST00000422070 SFRP5Q5T4F7 317 aa16.46■□□□□ 0.23
RBFOX1-204ENST00000422070 AKR7LQ8NHP1 331 aa16.46■□□□□ 0.23
RBFOX1-204ENST00000422070 FGFBP3Q8TAT2 258 aa16.46■□□□□ 0.23
RBFOX1-204ENST00000422070 FCAMRQ8WWV6 532 aa16.46■□□□□ 0.23
RBFOX1-204ENST00000422070 CHST5Q9GZS9 411 aa16.46■□□□□ 0.23
RBFOX1-204ENST00000422070 RNF121Q9H920 327 aa16.46■□□□□ 0.23
RBFOX1-204ENST00000422070 PRF1P14222 555 aa16.46■□□□□ 0.23
RBFOX1-204ENST00000422070 ZNF93P35789 620 aaPredicted RBP16.46■□□□□ 0.23
RBFOX1-204ENST00000422070 GDNFP39905 211 aa16.46■□□□□ 0.23
RBFOX1-204ENST00000422070 OR3A2P47893 321 aa16.46■□□□□ 0.23
RBFOX1-204ENST00000422070 AP3S2P59780 193 aa16.46■□□□□ 0.23
RBFOX1-204ENST00000422070 HGFACQ04756 655 aa16.46■□□□□ 0.23
RBFOX1-204ENST00000422070 GFOD2Q3B7J2 385 aa16.46■□□□□ 0.23
RBFOX1-204ENST00000422070 AGAP6Q5VW22 663 aa16.46■□□□□ 0.23
RBFOX1-204ENST00000422070 FBXW9Q5XUX1 488 aa16.46■□□□□ 0.23
RBFOX1-204ENST00000422070 RPUSD3Q6P087 351 aaKnown RBP16.46■□□□□ 0.23
RBFOX1-204ENST00000422070 PHF21AQ96BD5 680 aa16.46■□□□□ 0.23
RBFOX1-204ENST00000422070 SGK3Q96BR1 496 aa16.46■□□□□ 0.23
RBFOX1-204ENST00000422070 MARVELD1Q9BSK0 173 aa16.46■□□□□ 0.23
RBFOX1-204ENST00000422070 AUNIPQ9H7T9 357 aa16.46■□□□□ 0.23
RBFOX1-204ENST00000422070 DNAJC13O75165 2243 aa16.45■□□□□ 0.22
RBFOX1-204ENST00000422070 OR14I1A6ND48 311 aa16.45■□□□□ 0.22
RBFOX1-204ENST00000422070 ORC5O43913 435 aa16.45■□□□□ 0.22
RBFOX1-204ENST00000422070 HNRNPCP07910 306 aaKnown RBP eCLIP16.45■□□□□ 0.22
RBFOX1-204ENST00000422070 PATE4P0C8F1 98 aa16.45■□□□□ 0.22
RBFOX1-204ENST00000422070 MPGP29372 298 aa16.45■□□□□ 0.22
RBFOX1-204ENST00000422070 FOXC1Q12948 553 aa16.45■□□□□ 0.22
RBFOX1-204ENST00000422070 GUSBP1Q15486 140 aa16.45■□□□□ 0.22
RBFOX1-204ENST00000422070 PABPC1L2AQ5JQF8 200 aa16.45■□□□□ 0.22
RBFOX1-204ENST00000422070 CREB3L1Q96BA8 519 aa16.45■□□□□ 0.22
RBFOX1-204ENST00000422070 MMP28Q9H239 520 aa16.45■□□□□ 0.22
RBFOX1-204ENST00000422070 ITGB1BP2Q9UKP3 347 aa16.45■□□□□ 0.22
RBFOX1-204ENST00000422070 WASF3Q9UPY6 502 aa16.45■□□□□ 0.22
RBFOX1-204ENST00000422070 GFRA3O60609 400 aa16.44■□□□□ 0.22
RBFOX1-204ENST00000422070 SCGNO76038 276 aa16.44■□□□□ 0.22
RBFOX1-204ENST00000422070 BTCP35070 178 aa16.44■□□□□ 0.22
RBFOX1-204ENST00000422070 ARR3P36575 388 aa16.44■□□□□ 0.22
RBFOX1-204ENST00000422070 QRFPP83859 136 aa16.44■□□□□ 0.22
RBFOX1-204ENST00000422070 SSBP1Q04837 148 aaKnown RBP16.44■□□□□ 0.22
RBFOX1-204ENST00000422070 FAPQ12884 760 aa16.44■□□□□ 0.22
RBFOX1-204ENST00000422070 PLA1AQ53H76 456 aa16.44■□□□□ 0.22
RBFOX1-204ENST00000422070 RAB12Q6IQ22 244 aa16.44■□□□□ 0.22
RBFOX1-204ENST00000422070 COLCA1Q6ZS62 124 aa16.44■□□□□ 0.22
RBFOX1-204ENST00000422070 KRT74Q7RTS7 529 aa16.44■□□□□ 0.22
RBFOX1-204ENST00000422070 P4HA3Q7Z4N8 544 aa16.44■□□□□ 0.22
RBFOX1-204ENST00000422070 BIVMQ86UB2 503 aa16.44■□□□□ 0.22
RBFOX1-204ENST00000422070 OR52I2Q8NH67 350 aa16.44■□□□□ 0.22
RBFOX1-204ENST00000422070 NUDT16L1Q9BRJ7 211 aaKnown RBP16.44■□□□□ 0.22
RBFOX1-204ENST00000422070 C1QTNF5Q9BXJ0 243 aa16.44■□□□□ 0.22
RBFOX1-204ENST00000422070 COPZ2Q9P299 210 aa16.44■□□□□ 0.22
RBFOX1-204ENST00000422070 RAB22AQ9UL26 194 aa16.44■□□□□ 0.22
RBFOX1-204ENST00000422070 TNRC6AQ8NDV7 1962 aaKnown RBP16.44■□□□□ 0.22
RBFOX1-204ENST00000422070 IGKV1-9A0A0C4DH69 117 aa16.43■□□□□ 0.22
RBFOX1-204ENST00000422070 CNOT4O95628 575 aaKnown RBP16.43■□□□□ 0.22
RBFOX1-204ENST00000422070 GSTT2BP0CG30 244 aa16.43■□□□□ 0.22
RBFOX1-204ENST00000422070 SRP9P49458 86 aaKnown RBP16.43■□□□□ 0.22
RBFOX1-204ENST00000422070 OR2W3Q7Z3T1 314 aa16.43■□□□□ 0.22
RBFOX1-204ENST00000422070 UBE2J2Q8N2K1 259 aa16.43■□□□□ 0.22
RBFOX1-204ENST00000422070 SEMA6DQ8NFY4 1073 aa16.43■□□□□ 0.22
RBFOX1-204ENST00000422070 SPSB4Q96A44 273 aa16.43■□□□□ 0.22
RBFOX1-204ENST00000422070 REEP6Q96HR9 211 aa16.43■□□□□ 0.22
RBFOX1-204ENST00000422070 TAAR6Q96RI8 345 aa16.43■□□□□ 0.22
RBFOX1-204ENST00000422070 NLKQ9UBE8 527 aa16.43■□□□□ 0.22
RBFOX1-204ENST00000422070 MEIOCA2RUB1 952 aa16.43■□□□□ 0.22
RBFOX1-204ENST00000422070 NAP1L6A6NFF2 107 aa16.43■□□□□ 0.22
RBFOX1-204ENST00000422070 SULT1C2O00338 296 aa16.43■□□□□ 0.22
RBFOX1-204ENST00000422070 XRCC2O43543 280 aa16.43■□□□□ 0.22
RBFOX1-204ENST00000422070 LCATP04180 440 aa16.43■□□□□ 0.22
RBFOX1-204ENST00000422070 UBBP0CG47 229 aa16.43■□□□□ 0.22
RBFOX1-204ENST00000422070 TRAPPC2P0DI81 140 aa16.43■□□□□ 0.22
RBFOX1-204ENST00000422070 TRAPPC2BP0DI82 140 aa16.43■□□□□ 0.22
RBFOX1-204ENST00000422070 ALDH3B1P43353 468 aa16.43■□□□□ 0.22
RBFOX1-204ENST00000422070 FOXG1P55316 489 aaPredicted RBP16.43■□□□□ 0.22
RBFOX1-204ENST00000422070 CPEB3Q8NE35 698 aaKnown RBP16.43■□□□□ 0.22
RBFOX1-204ENST00000422070 ATG5Q9H1Y0 275 aa16.43■□□□□ 0.22
RBFOX1-204ENST00000422070 KCNK15Q9H427 330 aa16.43■□□□□ 0.22
RBFOX1-204ENST00000422070 GHRLQ9UBU3 117 aa16.43■□□□□ 0.22
RBFOX1-204ENST00000422070 PRSS50Q9UI38 385 aa16.43■□□□□ 0.22
RBFOX1-204ENST00000422070 ANKRD20A5PA0PJZ0 165 aa16.42■□□□□ 0.22
RBFOX1-204ENST00000422070 METTL21EPA6NDL7 271 aa16.42■□□□□ 0.22
RBFOX1-204ENST00000422070 TMEM14DPA8MWL7 114 aa16.42■□□□□ 0.22
RBFOX1-204ENST00000422070 AHRRA9YTQ3 701 aa16.42■□□□□ 0.22
RBFOX1-204ENST00000422070 H7C417 338 aa16.42■□□□□ 0.22
RBFOX1-204ENST00000422070 KDM4BO94953 1096 aa16.42■□□□□ 0.22
RBFOX1-204ENST00000422070 IL18BPO95998 194 aa16.42■□□□□ 0.22
RBFOX1-204ENST00000422070 GSK3AP49840 483 aa16.42■□□□□ 0.22
RBFOX1-204ENST00000422070 FAM189A2Q15884 450 aa16.42■□□□□ 0.22
RBFOX1-204ENST00000422070 OR1K1Q8NGR3 316 aa16.42■□□□□ 0.22
RBFOX1-204ENST00000422070 AKAP1Q92667 903 aaKnown RBP eCLIP16.42■□□□□ 0.22
RBFOX1-204ENST00000422070 WNT2BQ93097 391 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms