RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 PYCR1P32322 319 aa6.67□□□□□ -1.34
VIM-202ENST00000421459 NPY4RP50391 375 aa6.67□□□□□ -1.34
VIM-202ENST00000421459 RPS6KA3P51812 740 aa6.67□□□□□ -1.34
VIM-202ENST00000421459 GYS2P54840 703 aa6.67□□□□□ -1.34
VIM-202ENST00000421459 BPIFB3P59826 476 aa6.67□□□□□ -1.34
VIM-202ENST00000421459 GMFBP60983 142 aa6.67□□□□□ -1.34
VIM-202ENST00000421459 MALLQ13021 153 aa6.67□□□□□ -1.34
VIM-202ENST00000421459 KLRD1Q13241 179 aa6.67□□□□□ -1.34
VIM-202ENST00000421459 DGCR6Q14129 220 aa6.67□□□□□ -1.34
VIM-202ENST00000421459 MAPRE2Q15555 327 aa6.67□□□□□ -1.34
VIM-202ENST00000421459 RFX4Q33E94 735 aa6.67□□□□□ -1.34
VIM-202ENST00000421459 CD276Q5ZPR3 534 aa6.67□□□□□ -1.34
VIM-202ENST00000421459 WDR86Q86TI4 376 aa6.67□□□□□ -1.34
VIM-202ENST00000421459 ADCK1Q86TW2 530 aa6.67□□□□□ -1.34
VIM-202ENST00000421459 CYP4Z1Q86W10 505 aa6.67□□□□□ -1.34
VIM-202ENST00000421459 C11orf53Q8IXP5 236 aa6.67□□□□□ -1.34
VIM-202ENST00000421459 GCSAMQ8N6F7 178 aa6.67□□□□□ -1.34
VIM-202ENST00000421459 CELF2-AS1Q8N7Q2 184 aa6.67□□□□□ -1.34
VIM-202ENST00000421459 C11orf44Q8N8P7 122 aa6.67□□□□□ -1.34
VIM-202ENST00000421459 ZSCAN4Q8NAM6 433 aaPredicted RBP6.67□□□□□ -1.34
VIM-202ENST00000421459 FAM162AQ96A26 154 aa6.67□□□□□ -1.34
VIM-202ENST00000421459 C7orf34Q96L11 122 aa6.67□□□□□ -1.34
VIM-202ENST00000421459 SIKE1Q9BRV8 207 aa6.67□□□□□ -1.34
VIM-202ENST00000421459 FUZQ9BT04 418 aa6.67□□□□□ -1.34
VIM-202ENST00000421459 TRIM15Q9C019 465 aa6.67□□□□□ -1.34
VIM-202ENST00000421459 OR52D1Q9H346 318 aa6.67□□□□□ -1.34
VIM-202ENST00000421459 SIRT7Q9NRC8 400 aa6.67□□□□□ -1.34
VIM-202ENST00000421459 ONECUT1Q9UBC0 465 aa6.67□□□□□ -1.34
VIM-202ENST00000421459 CYB5R1Q9UHQ9 305 aa6.67□□□□□ -1.34
VIM-202ENST00000421459 AURKCQ9UQB9 309 aa6.67□□□□□ -1.34
VIM-202ENST00000421459 V9GYQ6 96 aa6.67□□□□□ -1.34
VIM-202ENST00000421459 TRAV38-1A0A0B4J264 116 aa6.66□□□□□ -1.34
VIM-202ENST00000421459 hCG_1807616A0A1W2PRN6 198 aa6.66□□□□□ -1.34
VIM-202ENST00000421459 GGT3PA6NGU5 568 aa6.66□□□□□ -1.34
VIM-202ENST00000421459 A6NLC8 198 aa6.66□□□□□ -1.34
VIM-202ENST00000421459 M0R135 149 aa6.66□□□□□ -1.34
VIM-202ENST00000421459 RENP00797 406 aa6.66□□□□□ -1.34
VIM-202ENST00000421459 LHBP01229 141 aa6.66□□□□□ -1.34
VIM-202ENST00000421459 LIPFP07098 398 aa6.66□□□□□ -1.34
VIM-202ENST00000421459 TROVE2P10155 538 aaKnown RBP eCLIP6.66□□□□□ -1.34
VIM-202ENST00000421459 COX4I1P13073 169 aa6.66□□□□□ -1.34
VIM-202ENST00000421459 SELLP14151 372 aa6.66□□□□□ -1.34
VIM-202ENST00000421459 AMY2BP19961 511 aa6.66□□□□□ -1.34
VIM-202ENST00000421459 PRKXP51817 358 aa6.66□□□□□ -1.34
VIM-202ENST00000421459 TPTEP56180 551 aa6.66□□□□□ -1.34
VIM-202ENST00000421459 CSNK2BP67870 215 aa6.66□□□□□ -1.34
VIM-202ENST00000421459 EGR3Q06889 387 aa6.66□□□□□ -1.34
VIM-202ENST00000421459 PDCD1Q15116 288 aa6.66□□□□□ -1.34
VIM-202ENST00000421459 C8orf82Q6P1X6 216 aaPredicted RBP6.66□□□□□ -1.34
VIM-202ENST00000421459 DNM1P34Q6PK57 102 aa6.66□□□□□ -1.34
VIM-202ENST00000421459 ZBTB46Q86UZ6 589 aa6.66□□□□□ -1.34
VIM-202ENST00000421459 LDLRAD3Q86YD5 345 aa6.66□□□□□ -1.34
VIM-202ENST00000421459 RNF148Q8N7C7 305 aa6.66□□□□□ -1.34
VIM-202ENST00000421459 FAM216BQ8N7L0 139 aa6.66□□□□□ -1.34
VIM-202ENST00000421459 Q8N7P7 452 aa6.66□□□□□ -1.34
VIM-202ENST00000421459 PNLDC1Q8NA58 520 aaKnown RBP6.66□□□□□ -1.34
VIM-202ENST00000421459 CYB561A3Q8NBI2 242 aa6.66□□□□□ -1.34
VIM-202ENST00000421459 OR5T2Q8NGG2 359 aa6.66□□□□□ -1.34
VIM-202ENST00000421459 OR56B2PQ8NGI1 322 aa6.66□□□□□ -1.34
VIM-202ENST00000421459 OR51L1Q8NGJ5 315 aa6.66□□□□□ -1.34
VIM-202ENST00000421459 OR2AJ1Q8NGZ0 328 aa6.66□□□□□ -1.34
VIM-202ENST00000421459 FANK1Q8TC84 345 aa6.66□□□□□ -1.34
VIM-202ENST00000421459 C17orf50Q8WW18 174 aa6.66□□□□□ -1.34
VIM-202ENST00000421459 ERGIC1Q969X5 290 aa6.66□□□□□ -1.34
VIM-202ENST00000421459 ZNF799Q96GE5 643 aa6.66□□□□□ -1.34
VIM-202ENST00000421459 IFT27Q9BW83 186 aa6.66□□□□□ -1.34
VIM-202ENST00000421459 NDEL1Q9GZM8 345 aa6.66□□□□□ -1.34
VIM-202ENST00000421459 ANKRD19PQ9H560 264 aa6.66□□□□□ -1.34
VIM-202ENST00000421459 CNTD2Q9H8S5 307 aa6.66□□□□□ -1.34
VIM-202ENST00000421459 KIF17Q9P2E2 1029 aa6.66□□□□□ -1.34
VIM-202ENST00000421459 RPUSD1Q9UJJ7 312 aaKnown RBP6.66□□□□□ -1.34
VIM-202ENST00000421459 CAPN7Q9Y6W3 813 aa6.66□□□□□ -1.34
VIM-202ENST00000421459 DNAH9Q9NYC9 4486 aa6.65□□□□□ -1.34
VIM-202ENST00000421459 RNASEK-C17orf49H0YIS7 233 aa6.65□□□□□ -1.34
VIM-202ENST00000421459 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.65□□□□□ -1.34
VIM-202ENST00000421459 ACOT8O14734 319 aa6.65□□□□□ -1.34
VIM-202ENST00000421459 RRP9O43818 475 aaKnown RBP6.65□□□□□ -1.34
VIM-202ENST00000421459 GMDSO60547 372 aa6.65□□□□□ -1.34
VIM-202ENST00000421459 PTBP3O95758 552 aaKnown RBP6.65□□□□□ -1.34
VIM-202ENST00000421459 RHCEP18577 417 aa6.65□□□□□ -1.34
VIM-202ENST00000421459 MSX2P35548 267 aaPredicted RBP6.65□□□□□ -1.34
VIM-202ENST00000421459 CBX1P83916 185 aa6.65□□□□□ -1.34
VIM-202ENST00000421459 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.65□□□□□ -1.34
VIM-202ENST00000421459 ECH1Q13011 328 aa6.65□□□□□ -1.34
VIM-202ENST00000421459 IKZF1Q13422 519 aa6.65□□□□□ -1.34
VIM-202ENST00000421459 PCK2Q16822 640 aa6.65□□□□□ -1.34
VIM-202ENST00000421459 SLC36A3Q495N2 470 aa6.65□□□□□ -1.34
VIM-202ENST00000421459 CDONQ4KMG0 1287 aa6.65□□□□□ -1.34
VIM-202ENST00000421459 WDR38Q5JTN6 314 aa6.65□□□□□ -1.34
VIM-202ENST00000421459 GLYATQ6IB77 296 aa6.65□□□□□ -1.34
VIM-202ENST00000421459 SLC35E4Q6ICL7 350 aa6.65□□□□□ -1.34
VIM-202ENST00000421459 PGM2L1Q6PCE3 622 aa6.65□□□□□ -1.34
VIM-202ENST00000421459 LYG1Q8N1E2 194 aa6.65□□□□□ -1.34
VIM-202ENST00000421459 LY6G5BQ8NDX9 201 aa6.65□□□□□ -1.34
VIM-202ENST00000421459 RP9Q8TA86 221 aaKnown RBP6.65□□□□□ -1.34
VIM-202ENST00000421459 PPP1R35Q8TAP8 253 aa6.65□□□□□ -1.34
VIM-202ENST00000421459 LRRC29Q8WV35 223 aa6.65□□□□□ -1.34
VIM-202ENST00000421459 ITPKCQ96DU7 683 aa6.65□□□□□ -1.34
VIM-202ENST00000421459 KCTD14Q9BQ13 255 aaPredicted RBP6.65□□□□□ -1.34
VIM-202ENST00000421459 PPA2Q9H2U2 334 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms