RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 FAM87AP0C7U9 286 aa18.28■□□□□ 0.52
GPC1-202ENST00000420138 FAM157BP0CG42 384 aa18.28■□□□□ 0.52
GPC1-202ENST00000420138 HTR5AP47898 357 aa18.28■□□□□ 0.52
GPC1-202ENST00000420138 PABPC1L2AQ5JQF8 200 aa18.28■□□□□ 0.52
GPC1-202ENST00000420138 WNT2BQ93097 391 aa18.28■□□□□ 0.52
GPC1-202ENST00000420138 NOX3Q9HBY0 568 aa18.28■□□□□ 0.52
GPC1-202ENST00000420138 FREM1Q5H8C1 2179 aa18.27■□□□□ 0.52
GPC1-202ENST00000420138 EEF1E1O43324 174 aaKnown RBP18.27■□□□□ 0.52
GPC1-202ENST00000420138 HLA-HP01893 362 aa18.27■□□□□ 0.52
GPC1-202ENST00000420138 TRAPPC2P0DI81 140 aa18.27■□□□□ 0.52
GPC1-202ENST00000420138 TRAPPC2BP0DI82 140 aa18.27■□□□□ 0.52
GPC1-202ENST00000420138 CBX3Q13185 183 aa18.27■□□□□ 0.52
GPC1-202ENST00000420138 GFOD2Q3B7J2 385 aa18.27■□□□□ 0.52
GPC1-202ENST00000420138 RSBN1Q5VWQ0 802 aaPredicted RBP18.27■□□□□ 0.52
GPC1-202ENST00000420138 TFAP2EQ6VUC0 442 aa18.27■□□□□ 0.52
GPC1-202ENST00000420138 FAM214BQ7L5A3 538 aa18.27■□□□□ 0.52
GPC1-202ENST00000420138 COMMD2Q86X83 199 aa18.27■□□□□ 0.52
GPC1-202ENST00000420138 SGK3Q96BR1 496 aa18.27■□□□□ 0.52
GPC1-202ENST00000420138 GPR137Q96N19 417 aa18.27■□□□□ 0.52
GPC1-202ENST00000420138 ABCG5Q9H222 651 aa18.27■□□□□ 0.52
GPC1-202ENST00000420138 CGGBP1Q9UFW8 167 aaPredicted RBP18.27■□□□□ 0.52
GPC1-202ENST00000420138 MEGF11A6BM72 1044 aa18.26■□□□□ 0.51
GPC1-202ENST00000420138 HMX3A6NHT5 357 aa18.26■□□□□ 0.51
GPC1-202ENST00000420138 AHRRA9YTQ3 701 aa18.26■□□□□ 0.51
GPC1-202ENST00000420138 LANCL1O43813 399 aa18.26■□□□□ 0.51
GPC1-202ENST00000420138 MPGP29372 298 aa18.26■□□□□ 0.51
GPC1-202ENST00000420138 MMP15P51511 669 aa18.26■□□□□ 0.51
GPC1-202ENST00000420138 SCAND1P57086 179 aa18.26■□□□□ 0.51
GPC1-202ENST00000420138 GLT8D1Q68CQ7 371 aa18.26■□□□□ 0.51
GPC1-202ENST00000420138 OR1M1Q8NGA1 313 aa18.26■□□□□ 0.51
GPC1-202ENST00000420138 OR51D1Q8NGF3 324 aa18.26■□□□□ 0.51
GPC1-202ENST00000420138 B3GNT2Q9NY97 397 aa18.26■□□□□ 0.51
GPC1-202ENST00000420138 ETV7Q9Y603 341 aa18.26■□□□□ 0.51
GPC1-202ENST00000420138 V9GYS6 101 aa18.26■□□□□ 0.51
GPC1-202ENST00000420138 CACNA1GO43497 2377 aa18.26■□□□□ 0.51
GPC1-202ENST00000420138 CRYABP02511 175 aaKnown RBP18.26■□□□□ 0.51
GPC1-202ENST00000420138 GNALP38405 381 aa18.26■□□□□ 0.51
GPC1-202ENST00000420138 SLC36A2Q495M3 483 aa18.26■□□□□ 0.51
GPC1-202ENST00000420138 C1orf100Q5SVJ3 147 aa18.26■□□□□ 0.51
GPC1-202ENST00000420138 OR52H1Q8NGJ2 320 aa18.26■□□□□ 0.51
GPC1-202ENST00000420138 OR5D14Q8NGL3 314 aa18.26■□□□□ 0.51
GPC1-202ENST00000420138 NLKQ9UBE8 527 aa18.26■□□□□ 0.51
GPC1-202ENST00000420138 ATPIF1Q9UII2 106 aa18.26■□□□□ 0.51
GPC1-202ENST00000420138 KIR2DL2P43627 348 aaPredicted RBP18.25■□□□□ 0.51
GPC1-202ENST00000420138 GPR176Q14439 515 aa18.25■□□□□ 0.51
GPC1-202ENST00000420138 RAB11BQ15907 218 aa18.25■□□□□ 0.51
GPC1-202ENST00000420138 LINC00303Q3SY05 128 aa18.25■□□□□ 0.51
GPC1-202ENST00000420138 GLYATL3Q5SZD4 288 aa18.25■□□□□ 0.51
GPC1-202ENST00000420138 SEM1Q6ZVN7 128 aa18.25■□□□□ 0.51
GPC1-202ENST00000420138 OR5AS1Q8N127 324 aa18.25■□□□□ 0.51
GPC1-202ENST00000420138 NKAIN3Q8N8D7 197 aa18.25■□□□□ 0.51
GPC1-202ENST00000420138 OR52N4Q8NGI2 321 aa18.25■□□□□ 0.51
GPC1-202ENST00000420138 OR1K1Q8NGR3 316 aa18.25■□□□□ 0.51
GPC1-202ENST00000420138 OR13C9Q8NGT0 318 aa18.25■□□□□ 0.51
GPC1-202ENST00000420138 OR6F1Q8NGZ6 308 aa18.25■□□□□ 0.51
GPC1-202ENST00000420138 BCL2L2Q92843 193 aaPredicted RBP18.25■□□□□ 0.51
GPC1-202ENST00000420138 CTDSPLO15194 276 aa18.24■□□□□ 0.51
GPC1-202ENST00000420138 DHRS3O75911 302 aa18.24■□□□□ 0.51
GPC1-202ENST00000420138 BDKRB2P30411 391 aa18.24■□□□□ 0.51
GPC1-202ENST00000420138 NSUN5P2Q63ZY6 315 aa18.24■□□□□ 0.51
GPC1-202ENST00000420138 ZNF324BQ6AW86 544 aaPredicted RBP18.24■□□□□ 0.51
GPC1-202ENST00000420138 BIVMQ86UB2 503 aa18.24■□□□□ 0.51
GPC1-202ENST00000420138 SYNPRQ8TBG9 265 aa18.24■□□□□ 0.51
GPC1-202ENST00000420138 FAM3DQ96BQ1 224 aa18.24■□□□□ 0.51
GPC1-202ENST00000420138 KCNK15Q9H427 330 aa18.24■□□□□ 0.51
GPC1-202ENST00000420138 TMEM138Q9NPI0 162 aa18.24■□□□□ 0.51
GPC1-202ENST00000420138 ZNF221Q9UK13 617 aa18.24■□□□□ 0.51
GPC1-202ENST00000420138 MRPS7Q9Y2R9 242 aaKnown RBP18.24■□□□□ 0.51
GPC1-202ENST00000420138 LOC100509620A0A075B734 347 aa18.23■□□□□ 0.51
GPC1-202ENST00000420138 TMEM8BA6NDV4 472 aa18.23■□□□□ 0.51
GPC1-202ENST00000420138 ZNF20P17024 532 aa18.23■□□□□ 0.51
GPC1-202ENST00000420138 POU3F4P49335 361 aa18.23■□□□□ 0.51
GPC1-202ENST00000420138 EFNB2P52799 333 aa18.23■□□□□ 0.51
GPC1-202ENST00000420138 C2orf76Q3KRA6 126 aa18.23■□□□□ 0.51
GPC1-202ENST00000420138 ZNF585AQ6P3V2 769 aa18.23■□□□□ 0.51
GPC1-202ENST00000420138 ANKRD16Q6P6B7 361 aa18.23■□□□□ 0.51
GPC1-202ENST00000420138 FAM180AQ6UWF9 173 aa18.23■□□□□ 0.51
GPC1-202ENST00000420138 RNF144BQ7Z419 303 aa18.23■□□□□ 0.51
GPC1-202ENST00000420138 GLCCI1Q86VQ1 547 aa18.23■□□□□ 0.51
GPC1-202ENST00000420138 Q8NA96 180 aa18.23■□□□□ 0.51
GPC1-202ENST00000420138 OR6M1Q8NGM8 313 aa18.23■□□□□ 0.51
GPC1-202ENST00000420138 YIPF5Q969M3 257 aa18.23■□□□□ 0.51
GPC1-202ENST00000420138 HAVCR1Q96D42 359 aa18.23■□□□□ 0.51
GPC1-202ENST00000420138 ZFP3Q96NJ6 502 aa18.23■□□□□ 0.51
GPC1-202ENST00000420138 MARVELD1Q9BSK0 173 aa18.23■□□□□ 0.51
GPC1-202ENST00000420138 OR10A2Q9H208 303 aa18.23■□□□□ 0.51
GPC1-202ENST00000420138 TUBD1Q9UJT1 453 aa18.23■□□□□ 0.51
GPC1-202ENST00000420138 CACNG2Q9Y698 323 aa18.23■□□□□ 0.51
GPC1-202ENST00000420138 BSNQ9UPA5 3926 aa18.23■□□□□ 0.51
GPC1-202ENST00000420138 A0A0B4J293 547 aa18.23■□□□□ 0.51
GPC1-202ENST00000420138 GSTZ1O43708 216 aaPredicted RBP18.23■□□□□ 0.51
GPC1-202ENST00000420138 TMIGD3P0DMS9 266 aaPredicted RBP18.23■□□□□ 0.51
GPC1-202ENST00000420138 RAB3AP20336 220 aa18.23■□□□□ 0.51
GPC1-202ENST00000420138 HLA-DMAP28067 261 aa18.23■□□□□ 0.51
GPC1-202ENST00000420138 HTR2CP28335 458 aa18.23■□□□□ 0.51
GPC1-202ENST00000420138 FOXF2Q12947 444 aa18.23■□□□□ 0.51
GPC1-202ENST00000420138 HIKESHIQ53FT3 197 aa18.23■□□□□ 0.51
GPC1-202ENST00000420138 COLCA1Q6ZS62 124 aa18.23■□□□□ 0.51
GPC1-202ENST00000420138 IZUMO1Q8IYV9 350 aa18.23■□□□□ 0.51
GPC1-202ENST00000420138 OR4D6Q8NGJ1 314 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms