RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 ZNF878C9JN71 531 aa9.2□□□□□ -0.94
SSBP3-206ENST00000420121 TRIM77I1YAP6 450 aa9.2□□□□□ -0.94
SSBP3-206ENST00000420121 CST1P01037 141 aa9.2□□□□□ -0.94
SSBP3-206ENST00000420121 PPIAL4GP0DN37 164 aa9.2□□□□□ -0.94
SSBP3-206ENST00000420121 IGHV4-38-2P0DP08 117 aa9.2□□□□□ -0.94
SSBP3-206ENST00000420121 GRK5P34947 590 aa9.2□□□□□ -0.94
SSBP3-206ENST00000420121 UBA52P62987 128 aaKnown RBP9.2□□□□□ -0.94
SSBP3-206ENST00000420121 GK3PQ14409 553 aa9.2□□□□□ -0.94
SSBP3-206ENST00000420121 KLHL12Q53G59 568 aa9.2□□□□□ -0.94
SSBP3-206ENST00000420121 DCDC5Q6ZRR9 648 aa9.2□□□□□ -0.94
SSBP3-206ENST00000420121 SPATC1Q76KD6 591 aa9.2□□□□□ -0.94
SSBP3-206ENST00000420121 DOK3Q7L591 496 aa9.2□□□□□ -0.94
SSBP3-206ENST00000420121 DPY19L4Q7Z388 723 aa9.2□□□□□ -0.94
SSBP3-206ENST00000420121 WDR86Q86TI4 376 aa9.2□□□□□ -0.94
SSBP3-206ENST00000420121 AQP12AQ8IXF9 295 aa9.2□□□□□ -0.94
SSBP3-206ENST00000420121 TIGD4Q8IY51 512 aa9.2□□□□□ -0.94
SSBP3-206ENST00000420121 HS3ST5Q8IZT8 346 aa9.2□□□□□ -0.94
SSBP3-206ENST00000420121 BPIFB2Q8N4F0 458 aa9.2□□□□□ -0.94
SSBP3-206ENST00000420121 SIGLECL1Q8N7X8 197 aa9.2□□□□□ -0.94
SSBP3-206ENST00000420121 OR56B2PQ8NGI1 322 aa9.2□□□□□ -0.94
SSBP3-206ENST00000420121 OR6K6Q8NGW6 343 aa9.2□□□□□ -0.94
SSBP3-206ENST00000420121 GIPC3Q8TF64 312 aa9.2□□□□□ -0.94
SSBP3-206ENST00000420121 RNF133Q8WVZ7 376 aa9.2□□□□□ -0.94
SSBP3-206ENST00000420121 SPRYD4Q8WW59 207 aaPredicted RBP9.2□□□□□ -0.94
SSBP3-206ENST00000420121 RAB40AQ8WXH6 277 aa9.2□□□□□ -0.94
SSBP3-206ENST00000420121 UPRTQ96BW1 309 aa9.2□□□□□ -0.94
SSBP3-206ENST00000420121 SLC7A6OSQ96CW6 309 aaPredicted RBP9.2□□□□□ -0.94
SSBP3-206ENST00000420121 COPS4Q9BT78 406 aa9.2□□□□□ -0.94
SSBP3-206ENST00000420121 THTPAQ9BU02 230 aa9.2□□□□□ -0.94
SSBP3-206ENST00000420121 ADAT1Q9BUB4 502 aaKnown RBP9.2□□□□□ -0.94
SSBP3-206ENST00000420121 CENPMQ9NSP4 180 aa9.2□□□□□ -0.94
SSBP3-206ENST00000420121 MRPL15Q9P015 296 aaKnown RBP9.2□□□□□ -0.94
SSBP3-206ENST00000420121 OR5V1Q9UGF6 321 aa9.2□□□□□ -0.94
SSBP3-206ENST00000420121 SOX21Q9Y651 276 aaPredicted RBP9.2□□□□□ -0.94
SSBP3-206ENST00000420121 KIR2DS1A0A191URI9 304 aa9.19□□□□□ -0.94
SSBP3-206ENST00000420121 GGT3PA6NGU5 568 aa9.19□□□□□ -0.94
SSBP3-206ENST00000420121 LRRC30A6NM36 301 aa9.19□□□□□ -0.94
SSBP3-206ENST00000420121 RIIAD1A6NNX1 92 aa9.19□□□□□ -0.94
SSBP3-206ENST00000420121 C22orf46C9J442 243 aa9.19□□□□□ -0.94
SSBP3-206ENST00000420121 GMDSO60547 372 aa9.19□□□□□ -0.94
SSBP3-206ENST00000420121 GLCEO94923 617 aa9.19□□□□□ -0.94
SSBP3-206ENST00000420121 PLATP00750 562 aa9.19□□□□□ -0.94
SSBP3-206ENST00000420121 IFNGP01579 166 aa9.19□□□□□ -0.94
SSBP3-206ENST00000420121 ZNF3P17036 446 aa9.19□□□□□ -0.94
SSBP3-206ENST00000420121 FPR2P25090 351 aa9.19□□□□□ -0.94
SSBP3-206ENST00000420121 PITPNBP48739 271 aa9.19□□□□□ -0.94
SSBP3-206ENST00000420121 GNB2P62879 340 aa9.19□□□□□ -0.94
SSBP3-206ENST00000420121 FAM3AP98173 230 aa9.19□□□□□ -0.94
SSBP3-206ENST00000420121 EIF2B1Q14232 305 aaKnown RBP9.19□□□□□ -0.94
SSBP3-206ENST00000420121 OR8G1Q15617 311 aa9.19□□□□□ -0.94
SSBP3-206ENST00000420121 ARMCX4Q5H9R4 360 aa9.19□□□□□ -0.94
SSBP3-206ENST00000420121 WDR25Q64LD2 544 aaPredicted RBP9.19□□□□□ -0.94
SSBP3-206ENST00000420121 C12orf54Q6X4T0 127 aa9.19□□□□□ -0.94
SSBP3-206ENST00000420121 ZNF826PQ6ZT77 177 aa9.19□□□□□ -0.94
SSBP3-206ENST00000420121 C9orf139Q6ZV77 190 aa9.19□□□□□ -0.94
SSBP3-206ENST00000420121 SLC16A9Q7RTY1 509 aa9.19□□□□□ -0.94
SSBP3-206ENST00000420121 C11orf53Q8IXP5 236 aa9.19□□□□□ -0.94
SSBP3-206ENST00000420121 C1orf87Q8N0U7 546 aa9.19□□□□□ -0.94
SSBP3-206ENST00000420121 GCSAMQ8N6F7 178 aa9.19□□□□□ -0.94
SSBP3-206ENST00000420121 OR6N2Q8NGY6 317 aa9.19□□□□□ -0.94
SSBP3-206ENST00000420121 TEX47Q8TBZ9 253 aa9.19□□□□□ -0.94
SSBP3-206ENST00000420121 SGK3Q96BR1 496 aa9.19□□□□□ -0.94
SSBP3-206ENST00000420121 JMJD8Q96S16 334 aa9.19□□□□□ -0.94
SSBP3-206ENST00000420121 INTS14Q96SY0 518 aa9.19□□□□□ -0.94
SSBP3-206ENST00000420121 OCSTAMPQ9BR26 566 aa9.19□□□□□ -0.94
SSBP3-206ENST00000420121 ABHD6Q9BV23 337 aa9.19□□□□□ -0.94
SSBP3-206ENST00000420121 SLC22A4Q9H015 551 aa9.19□□□□□ -0.94
SSBP3-206ENST00000420121 PPP1R3EQ9H7J1 279 aa9.19□□□□□ -0.94
SSBP3-206ENST00000420121 RNF7Q9UBF6 113 aa9.19□□□□□ -0.94
SSBP3-206ENST00000420121 hCG_38984A0A1B0GV85 526 aa9.18□□□□□ -0.94
SSBP3-206ENST00000420121 TCRBV3S1A0A5B6 114 aa9.18□□□□□ -0.94
SSBP3-206ENST00000420121 DNAJC9-AS1A6NH13 148 aa9.18□□□□□ -0.94
SSBP3-206ENST00000420121 PHYHO14832 338 aa9.18□□□□□ -0.94
SSBP3-206ENST00000420121 XRCC2O43543 280 aa9.18□□□□□ -0.94
SSBP3-206ENST00000420121 LHBP01229 141 aa9.18□□□□□ -0.94
SSBP3-206ENST00000420121 EGR1P18146 543 aa9.18□□□□□ -0.94
SSBP3-206ENST00000420121 PRKACGP22612 351 aa9.18□□□□□ -0.94
SSBP3-206ENST00000420121 GSTT1P30711 240 aa9.18□□□□□ -0.94
SSBP3-206ENST00000420121 OPRL1P41146 370 aa9.18□□□□□ -0.94
SSBP3-206ENST00000420121 CX3CR1P49238 355 aa9.18□□□□□ -0.94
SSBP3-206ENST00000420121 BLVRAP53004 296 aa9.18□□□□□ -0.94
SSBP3-206ENST00000420121 GRB2P62993 217 aaKnown RBP9.18□□□□□ -0.94
SSBP3-206ENST00000420121 ACTG1P63261 375 aa9.18□□□□□ -0.94
SSBP3-206ENST00000420121 CDK5Q00535 292 aa9.18□□□□□ -0.94
SSBP3-206ENST00000420121 GINS1Q14691 196 aa9.18□□□□□ -0.94
SSBP3-206ENST00000420121 TRPM8Q7Z2W7 1104 aa9.18□□□□□ -0.94
SSBP3-206ENST00000420121 ERI1Q8IV48 349 aaKnown RBP9.18□□□□□ -0.94
SSBP3-206ENST00000420121 PARP8Q8N3A8 854 aa9.18□□□□□ -0.94
SSBP3-206ENST00000420121 PAPD5Q8NDF8 572 aaKnown RBP9.18□□□□□ -0.94
SSBP3-206ENST00000420121 OR8B3Q8NGG8 313 aa9.18□□□□□ -0.94
SSBP3-206ENST00000420121 OR11L1Q8NGX0 322 aa9.18□□□□□ -0.94
SSBP3-206ENST00000420121 LRGUKQ96M69 825 aa9.18□□□□□ -0.94
SSBP3-206ENST00000420121 OR8B2Q96RD0 313 aa9.18□□□□□ -0.94
SSBP3-206ENST00000420121 MRI1Q9BV20 369 aa9.18□□□□□ -0.94
SSBP3-206ENST00000420121 TOR3AQ9H497 397 aa9.18□□□□□ -0.94
SSBP3-206ENST00000420121 OPA3Q9H6K4 179 aa9.18□□□□□ -0.94
SSBP3-206ENST00000420121 FN3KRPQ9HA64 309 aa9.18□□□□□ -0.94
SSBP3-206ENST00000420121 NTN4Q9HB63 628 aa9.18□□□□□ -0.94
SSBP3-206ENST00000420121 SMURF1Q9HCE7 757 aa9.18□□□□□ -0.94
SSBP3-206ENST00000420121 PDP1Q9P0J1 537 aaPredicted RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms