RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 ACTA2P62736 377 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 RPS24P62847 133 aaKnown RBP2.22□□□□□ -2.05
VPS41-206ENST00000418457 RPS27AP62979 156 aaKnown RBP2.22□□□□□ -2.05
VPS41-206ENST00000418457 UBA52P62987 128 aaKnown RBP2.22□□□□□ -2.05
VPS41-206ENST00000418457 ACTG2P63267 376 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 FKBP1BP68106 108 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 SSBP1Q04837 148 aaKnown RBP2.22□□□□□ -2.05
VPS41-206ENST00000418457 FGL1Q08830 312 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 ARHGAP19Q14CB8 494 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 PGGHGQ32M88 737 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 MOGAT2Q3SYC2 334 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 SLC36A2Q495M3 483 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 FAM106AQ4KMX7 169 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 MPPE1Q53F39 396 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 EIPR1Q53HC9 387 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 ZNF542PQ5EBM4 170 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 EOGTQ5NDL2 527 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 CLVS2Q5SYC1 327 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 OR2G6Q5TZ20 316 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 SDHAF4Q5VUM1 108 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 OLFML2AQ68BL7 652 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 TPGS2Q68CL5 300 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 ACSM5Q6NUN0 579 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 LPCAT3Q6P1A2 487 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 PLBD1Q6P4A8 553 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 PAQR6Q6TCH4 344 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 DHRS11Q6UWP2 260 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 TMEM91Q6ZNR0 172 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 USP50Q70EL3 339 aaPredicted RBP2.22□□□□□ -2.05
VPS41-206ENST00000418457 C6orf120Q7Z4R8 191 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 SIAH3Q8IW03 269 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 ZNF440Q8IYI8 595 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 TRAM1L1Q8N609 369 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 ACBD7Q8N6N7 88 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 SAMD12Q8N8I0 201 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.22□□□□□ -2.05
VPS41-206ENST00000418457 NHLRC2Q8NBF2 726 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 ZBTB44Q8NCP5 570 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 MORN4Q8NDC4 146 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 TTLQ8NG68 377 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 OR2T33Q8NG76 320 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 GPR32P1Q8NGA4 272 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 OR52L1Q8NGH7 329 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 OR6M1Q8NGM8 313 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 OR8D4Q8NGM9 314 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 OR2T35Q8NGX2 323 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 OR6K3Q8NGY3 331 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 OR5AK3PQ8NH89 298 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 TRMT10AQ8TBZ6 339 aaKnown RBP2.22□□□□□ -2.05
VPS41-206ENST00000418457 SPRYD4Q8WW59 207 aaPredicted RBP2.22□□□□□ -2.05
VPS41-206ENST00000418457 SLC5A11Q8WWX8 675 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 ACOT11Q8WXI4 607 aaPredicted RBP2.22□□□□□ -2.05
VPS41-206ENST00000418457 SMPDL3AQ92484 453 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 THRSPQ92748 146 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 YIPF5Q969M3 257 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 TMEM203Q969S6 136 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 ZNF689Q96CS4 500 aaPredicted RBP2.22□□□□□ -2.05
VPS41-206ENST00000418457 ECHDC3Q96DC8 303 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 TCEAL4Q96EI5 215 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 PHYHIPLQ96FC7 376 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 MED8Q96G25 268 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 ZNF514Q96K75 400 aaPredicted RBP2.22□□□□□ -2.05
VPS41-206ENST00000418457 C18orf12Q96KH6 178 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 SLC35G5Q96KT7 338 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 FAM218AQ96MZ4 157 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 TSSK2Q96PF2 358 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 OR2A7Q96R45 310 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 ARHGDIGQ99819 225 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 CABLES2Q9BTV7 478 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 TMED9Q9BVK6 235 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 REG4Q9BYZ8 158 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 SLC19A3Q9BZV2 496 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 PCBD2Q9H0N5 130 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 ATG10Q9H0Y0 220 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 C20orf85Q9H1P6 137 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 RHBGQ9H310 441 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 UBQLN3Q9H347 655 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 CACYBPQ9HB71 228 aaKnown RBP2.22□□□□□ -2.05
VPS41-206ENST00000418457 TAS2R8Q9NYW2 309 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 TAS2R5Q9NYW4 299 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 LSM7Q9UK45 103 aaKnown RBP2.22□□□□□ -2.05
VPS41-206ENST00000418457 SPATA2Q9UM82 520 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 SCML1Q9UN30 329 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 OBSL1O75147 1896 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 DOCK6Q96HP0 2047 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 SZT2Q5T011 3432 aa2.21□□□□□ -2.05
VPS41-206ENST00000418457 KIAA1549LQ6ZVL6 1849 aa2.21□□□□□ -2.05
VPS41-206ENST00000418457 MTCL1Q9Y4B5 1905 aaKnown RBP2.21□□□□□ -2.06
VPS41-206ENST00000418457 LOC105371242A0A075B767 164 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 A0A087WUU8 490 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 A0A0B4J203 849 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 CCL15-CCL14A0A0B4J2E2 113 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 SLC5A10A0PJK1 596 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 CIB4A0PJX0 185 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 ANKRD20A5PA0PJZ0 165 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 TSPAN11A1L157 253 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 RAB19A4D1S5 217 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 GLTPD2A6NH11 291 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 SLC9B1P1A6NJY1 282 aa2.21□□□□□ -2.06
VPS41-206ENST00000418457 OR5K4A6NMS3 321 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms