RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 SPSB4Q96A44 273 aa13.12□□□□□ -0.31
ITGB1-204ENST00000417122 AMELYQ99218 206 aa13.12□□□□□ -0.31
ITGB1-204ENST00000417122 ADAT1Q9BUB4 502 aaKnown RBP13.12□□□□□ -0.31
ITGB1-204ENST00000417122 OCEL1Q9H607 264 aa13.12□□□□□ -0.31
ITGB1-204ENST00000417122 SP140LQ9H930 580 aa13.12□□□□□ -0.31
ITGB1-204ENST00000417122 TMEM165Q9HC07 324 aa13.12□□□□□ -0.31
ITGB1-204ENST00000417122 DNAJC27Q9NZQ0 273 aa13.12□□□□□ -0.31
ITGB1-204ENST00000417122 MRPL15Q9P015 296 aaKnown RBP13.12□□□□□ -0.31
ITGB1-204ENST00000417122 LYNP07948 512 aa13.11□□□□□ -0.31
ITGB1-204ENST00000417122 H2BFMP0C1H6 154 aa13.11□□□□□ -0.31
ITGB1-204ENST00000417122 OPRL1P41146 370 aa13.11□□□□□ -0.31
ITGB1-204ENST00000417122 ZNF121P58317 390 aaPredicted RBP13.11□□□□□ -0.31
ITGB1-204ENST00000417122 RPS7P62081 194 aaKnown RBP13.11□□□□□ -0.31
ITGB1-204ENST00000417122 ATP6AP1Q15904 470 aa13.11□□□□□ -0.31
ITGB1-204ENST00000417122 SNAPC1Q16533 368 aa13.11□□□□□ -0.31
ITGB1-204ENST00000417122 TIGD6Q17RP2 521 aa13.11□□□□□ -0.31
ITGB1-204ENST00000417122 ESCO2Q56NI9 601 aa13.11□□□□□ -0.31
ITGB1-204ENST00000417122 SLC35D3Q5M8T2 416 aa13.11□□□□□ -0.31
ITGB1-204ENST00000417122 FAM201AQ5SY85 155 aa13.11□□□□□ -0.31
ITGB1-204ENST00000417122 C1orf146Q5VVC0 180 aa13.11□□□□□ -0.31
ITGB1-204ENST00000417122 FAHD1Q6P587 224 aa13.11□□□□□ -0.31
ITGB1-204ENST00000417122 ZNF454Q8N9F8 522 aa13.11□□□□□ -0.31
ITGB1-204ENST00000417122 BBS1Q8NFJ9 593 aa13.11□□□□□ -0.31
ITGB1-204ENST00000417122 OR56B2PQ8NGI1 322 aa13.11□□□□□ -0.31
ITGB1-204ENST00000417122 OR11L1Q8NGX0 322 aa13.11□□□□□ -0.31
ITGB1-204ENST00000417122 OTOSQ8NHW6 89 aa13.11□□□□□ -0.31
ITGB1-204ENST00000417122 Q8TCH9 128 aa13.11□□□□□ -0.31
ITGB1-204ENST00000417122 THEM6Q8WUY1 208 aa13.11□□□□□ -0.31
ITGB1-204ENST00000417122 DVL3Q92997 716 aaPredicted RBP13.11□□□□□ -0.31
ITGB1-204ENST00000417122 C7orf69Q9H7B7 122 aa13.11□□□□□ -0.31
ITGB1-204ENST00000417122 UFSP2Q9NUQ7 469 aa13.11□□□□□ -0.31
ITGB1-204ENST00000417122 TVP23BQ9NYZ1 205 aa13.11□□□□□ -0.31
ITGB1-204ENST00000417122 POLR3KQ9Y2Y1 108 aaPredicted RBP13.11□□□□□ -0.31
ITGB1-204ENST00000417122 PPIAL4AQ9Y536 164 aa13.11□□□□□ -0.31
ITGB1-204ENST00000417122 A8MXK9 166 aa13.1□□□□□ -0.31
ITGB1-204ENST00000417122 FAM20BO75063 409 aa13.1□□□□□ -0.31
ITGB1-204ENST00000417122 FSTL3O95633 263 aa13.1□□□□□ -0.31
ITGB1-204ENST00000417122 WNT2P09544 360 aa13.1□□□□□ -0.31
ITGB1-204ENST00000417122 ADRA2CP18825 462 aa13.1□□□□□ -0.31
ITGB1-204ENST00000417122 SLC2A5P22732 501 aa13.1□□□□□ -0.31
ITGB1-204ENST00000417122 FASP25445 335 aa13.1□□□□□ -0.31
ITGB1-204ENST00000417122 DDOSTP39656 456 aa13.1□□□□□ -0.31
ITGB1-204ENST00000417122 NAA10P41227 235 aaPredicted RBP13.1□□□□□ -0.31
ITGB1-204ENST00000417122 MPPED2Q15777 294 aa13.1□□□□□ -0.31
ITGB1-204ENST00000417122 FAM57BQ71RH2 274 aa13.1□□□□□ -0.31
ITGB1-204ENST00000417122 SLC16A9Q7RTY1 509 aa13.1□□□□□ -0.31
ITGB1-204ENST00000417122 PRSS45Q7RTY3 260 aa13.1□□□□□ -0.31
ITGB1-204ENST00000417122 C1QL2Q7Z5L3 287 aa13.1□□□□□ -0.31
ITGB1-204ENST00000417122 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.1□□□□□ -0.31
ITGB1-204ENST00000417122 PARP8Q8N3A8 854 aa13.1□□□□□ -0.31
ITGB1-204ENST00000417122 SPERTQ8NA61 448 aa13.1□□□□□ -0.31
ITGB1-204ENST00000417122 OR52H1Q8NGJ2 320 aa13.1□□□□□ -0.31
ITGB1-204ENST00000417122 NANPQ8TBE9 248 aa13.1□□□□□ -0.31
ITGB1-204ENST00000417122 SGK3Q96BR1 496 aa13.1□□□□□ -0.31
ITGB1-204ENST00000417122 REEP6Q96HR9 211 aa13.1□□□□□ -0.31
ITGB1-204ENST00000417122 TMEM246Q9BRR3 403 aa13.1□□□□□ -0.31
ITGB1-204ENST00000417122 C19orf24Q9BVV8 132 aa13.1□□□□□ -0.31
ITGB1-204ENST00000417122 OR10A2Q9H208 303 aa13.1□□□□□ -0.31
ITGB1-204ENST00000417122 FN3KRPQ9HA64 309 aa13.1□□□□□ -0.31
ITGB1-204ENST00000417122 BRD7Q9NPI1 651 aa13.1□□□□□ -0.31
ITGB1-204ENST00000417122 MMP26Q9NRE1 261 aa13.1□□□□□ -0.31
ITGB1-204ENST00000417122 MIOXQ9UGB7 285 aa13.1□□□□□ -0.31
ITGB1-204ENST00000417122 LRCH1Q9Y2L9 728 aa13.1□□□□□ -0.31
ITGB1-204ENST00000417122 AP4S1Q9Y587 144 aa13.1□□□□□ -0.31
ITGB1-204ENST00000417122 G3V2T6 193 aa13.09□□□□□ -0.31
ITGB1-204ENST00000417122 TRAPPC2LH3BP13 241 aa13.09□□□□□ -0.31
ITGB1-204ENST00000417122 PTBP3O95758 552 aaKnown RBP13.09□□□□□ -0.31
ITGB1-204ENST00000417122 RPS2P15880 293 aaKnown RBP13.09□□□□□ -0.31
ITGB1-204ENST00000417122 CPT2P23786 658 aa13.09□□□□□ -0.31
ITGB1-204ENST00000417122 ESRRGP62508 458 aa13.09□□□□□ -0.31
ITGB1-204ENST00000417122 FAM3AP98173 230 aa13.09□□□□□ -0.31
ITGB1-204ENST00000417122 APOFQ13790 326 aa13.09□□□□□ -0.31
ITGB1-204ENST00000417122 PTGES3Q15185 160 aaKnown RBP13.09□□□□□ -0.31
ITGB1-204ENST00000417122 ZNF404Q494X3 552 aa13.09□□□□□ -0.31
ITGB1-204ENST00000417122 KLBQ86Z14 1044 aa13.09□□□□□ -0.31
ITGB1-204ENST00000417122 PLPP7Q8NBV4 271 aa13.09□□□□□ -0.31
ITGB1-204ENST00000417122 DUS3LQ96G46 650 aaKnown RBP13.09□□□□□ -0.31
ITGB1-204ENST00000417122 PGAM5Q96HS1 289 aa13.09□□□□□ -0.31
ITGB1-204ENST00000417122 KRT84Q9NSB2 600 aa13.09□□□□□ -0.31
ITGB1-204ENST00000417122 ZNF319Q9P2F9 582 aa13.09□□□□□ -0.31
ITGB1-204ENST00000417122 OPN4Q9UHM6 478 aa13.09□□□□□ -0.31
ITGB1-204ENST00000417122 A0A0A6YYJ9 748 aa13.08□□□□□ -0.32
ITGB1-204ENST00000417122 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.08□□□□□ -0.32
ITGB1-204ENST00000417122 hCG_38984A0A1B0GV85 526 aa13.08□□□□□ -0.32
ITGB1-204ENST00000417122 ANKRD30BLA7E2S9 258 aa13.08□□□□□ -0.32
ITGB1-204ENST00000417122 MITFO75030 526 aaPredicted RBP13.08□□□□□ -0.32
ITGB1-204ENST00000417122 ZNF12P17014 697 aa13.08□□□□□ -0.32
ITGB1-204ENST00000417122 EPHA1P21709 976 aa13.08□□□□□ -0.32
ITGB1-204ENST00000417122 CFL1P23528 166 aaKnown RBP13.08□□□□□ -0.32
ITGB1-204ENST00000417122 MZT1Q08AG7 82 aa13.08□□□□□ -0.32
ITGB1-204ENST00000417122 ZNF154Q13106 437 aa13.08□□□□□ -0.32
ITGB1-204ENST00000417122 GFOD2Q3B7J2 385 aa13.08□□□□□ -0.32
ITGB1-204ENST00000417122 AMIGO2Q86SJ2 522 aa13.08□□□□□ -0.32
ITGB1-204ENST00000417122 ZDHHC13Q8IUH4 622 aa13.08□□□□□ -0.32
ITGB1-204ENST00000417122 DEFB108BQ8NET1 73 aa13.08□□□□□ -0.32
ITGB1-204ENST00000417122 ZNF418Q8TF45 676 aaPredicted RBP13.08□□□□□ -0.32
ITGB1-204ENST00000417122 TEAD3Q99594 435 aa13.08□□□□□ -0.32
ITGB1-204ENST00000417122 SSBP3Q9BWW4 388 aaPredicted RBP13.08□□□□□ -0.32
ITGB1-204ENST00000417122 PRRG3Q9BZD7 231 aa13.08□□□□□ -0.32
ITGB1-204ENST00000417122 RNF7Q9UBF6 113 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms