RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 KCNJ8Q15842 424 aa14.68□□□□□ -0.06
PDLIM2-208ENST00000416159 WDR25Q64LD2 544 aaPredicted RBP14.68□□□□□ -0.06
PDLIM2-208ENST00000416159 LYPD2Q6UXB3 125 aa14.68□□□□□ -0.06
PDLIM2-208ENST00000416159 BCL6BQ8N143 479 aaPredicted RBP14.68□□□□□ -0.06
PDLIM2-208ENST00000416159 OR6K6Q8NGW6 343 aa14.68□□□□□ -0.06
PDLIM2-208ENST00000416159 GIPC3Q8TF64 312 aa14.68□□□□□ -0.06
PDLIM2-208ENST00000416159 DACT3Q96B18 629 aaPredicted RBP14.68□□□□□ -0.06
PDLIM2-208ENST00000416159 UPRTQ96BW1 309 aa14.68□□□□□ -0.06
PDLIM2-208ENST00000416159 ASB9Q96DX5 294 aa14.68□□□□□ -0.06
PDLIM2-208ENST00000416159 TOR3AQ9H497 397 aa14.68□□□□□ -0.06
PDLIM2-208ENST00000416159 SP140LQ9H930 580 aa14.68□□□□□ -0.06
PDLIM2-208ENST00000416159 CMC2Q9NRP2 79 aa14.68□□□□□ -0.06
PDLIM2-208ENST00000416159 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.67□□□□□ -0.06
PDLIM2-208ENST00000416159 LGALS8O00214 317 aa14.67□□□□□ -0.06
PDLIM2-208ENST00000416159 FAM107AO95990 144 aa14.67□□□□□ -0.06
PDLIM2-208ENST00000416159 CST1P01037 141 aa14.67□□□□□ -0.06
PDLIM2-208ENST00000416159 T-ENOLP0DO92 83 aa14.67□□□□□ -0.06
PDLIM2-208ENST00000416159 CLUP10909 449 aa14.67□□□□□ -0.06
PDLIM2-208ENST00000416159 SLC2A1P11166 492 aa14.67□□□□□ -0.06
PDLIM2-208ENST00000416159 GRK5P34947 590 aa14.67□□□□□ -0.06
PDLIM2-208ENST00000416159 DDOSTP39656 456 aa14.67□□□□□ -0.06
PDLIM2-208ENST00000416159 MTNR1AP48039 350 aa14.67□□□□□ -0.06
PDLIM2-208ENST00000416159 NPY4RP50391 375 aa14.67□□□□□ -0.06
PDLIM2-208ENST00000416159 BAMBIQ13145 260 aa14.67□□□□□ -0.06
PDLIM2-208ENST00000416159 EIF2B1Q14232 305 aaKnown RBP14.67□□□□□ -0.06
PDLIM2-208ENST00000416159 LINC01590Q5TEZ4 76 aa14.67□□□□□ -0.06
PDLIM2-208ENST00000416159 C9orf139Q6ZV77 190 aa14.67□□□□□ -0.06
PDLIM2-208ENST00000416159 PARP8Q8N3A8 854 aa14.67□□□□□ -0.06
PDLIM2-208ENST00000416159 OR56B2PQ8NGI1 322 aa14.67□□□□□ -0.06
PDLIM2-208ENST00000416159 TEX47Q8TBZ9 253 aa14.67□□□□□ -0.06
PDLIM2-208ENST00000416159 SPSB4Q96A44 273 aa14.67□□□□□ -0.06
PDLIM2-208ENST00000416159 NIPSNAP1Q9BPW8 284 aa14.67□□□□□ -0.06
PDLIM2-208ENST00000416159 NUDT16L1Q9BRJ7 211 aaKnown RBP14.67□□□□□ -0.06
PDLIM2-208ENST00000416159 C1orf21Q9H246 121 aa14.67□□□□□ -0.06
PDLIM2-208ENST00000416159 TRIM36Q9NQ86 728 aa14.67□□□□□ -0.06
PDLIM2-208ENST00000416159 N6AMT1Q9Y5N5 214 aa14.67□□□□□ -0.06
PDLIM2-208ENST00000416159 DHRS12A0PJE2 317 aa14.66□□□□□ -0.06
PDLIM2-208ENST00000416159 C5orf63A6NC05 138 aa14.66□□□□□ -0.06
PDLIM2-208ENST00000416159 NDUFA2O43678 99 aa14.66□□□□□ -0.06
PDLIM2-208ENST00000416159 APOC1P02654 83 aa14.66□□□□□ -0.06
PDLIM2-208ENST00000416159 HKR1P10072 659 aa14.66□□□□□ -0.06
PDLIM2-208ENST00000416159 ANOS1P23352 680 aa14.66□□□□□ -0.06
PDLIM2-208ENST00000416159 PSMB10P40306 273 aa14.66□□□□□ -0.06
PDLIM2-208ENST00000416159 FOXL1Q12952 345 aa14.66□□□□□ -0.06
PDLIM2-208ENST00000416159 AWAT1Q58HT5 328 aa14.66□□□□□ -0.06
PDLIM2-208ENST00000416159 ZNF841Q6ZN19 808 aa14.66□□□□□ -0.06
PDLIM2-208ENST00000416159 SHFQ7M4L6 423 aa14.66□□□□□ -0.06
PDLIM2-208ENST00000416159 C19orf18Q8NEA5 215 aa14.66□□□□□ -0.06
PDLIM2-208ENST00000416159 ZNF48Q96MX3 618 aaPredicted RBP14.66□□□□□ -0.06
PDLIM2-208ENST00000416159 INTS14Q96SY0 518 aa14.66□□□□□ -0.06
PDLIM2-208ENST00000416159 FEVQ99581 238 aa14.66□□□□□ -0.06
PDLIM2-208ENST00000416159 CHID1Q9BWS9 393 aa14.66□□□□□ -0.06
PDLIM2-208ENST00000416159 C14orf119Q9NWQ9 140 aa14.66□□□□□ -0.06
PDLIM2-208ENST00000416159 TAS2R1Q9NYW7 299 aa14.66□□□□□ -0.06
PDLIM2-208ENST00000416159 ERVK-18Q9QC07 812 aa14.66□□□□□ -0.06
PDLIM2-208ENST00000416159 TRAV38-1A0A0B4J264 116 aa14.65□□□□□ -0.06
PDLIM2-208ENST00000416159 ARRDC5A6NEK1 342 aa14.65□□□□□ -0.06
PDLIM2-208ENST00000416159 DNAJC9-AS1A6NH13 148 aa14.65□□□□□ -0.06
PDLIM2-208ENST00000416159 ANKRD30BLA7E2S9 258 aa14.65□□□□□ -0.06
PDLIM2-208ENST00000416159 H3BN98 237 aa14.65□□□□□ -0.06
PDLIM2-208ENST00000416159 TBX1O43435 398 aa14.65□□□□□ -0.06
PDLIM2-208ENST00000416159 GLCEO94923 617 aa14.65□□□□□ -0.06
PDLIM2-208ENST00000416159 PLATP00750 562 aa14.65□□□□□ -0.06
PDLIM2-208ENST00000416159 ANXA2P07355 339 aaKnown RBP14.65□□□□□ -0.06
PDLIM2-208ENST00000416159 IGHV4-38-2P0DP08 117 aa14.65□□□□□ -0.06
PDLIM2-208ENST00000416159 HOXB6P17509 224 aaKnown RBP14.65□□□□□ -0.06
PDLIM2-208ENST00000416159 HSD11B1P28845 292 aa14.65□□□□□ -0.06
PDLIM2-208ENST00000416159 GSTT1P30711 240 aa14.65□□□□□ -0.06
PDLIM2-208ENST00000416159 CX3CR1P49238 355 aa14.65□□□□□ -0.06
PDLIM2-208ENST00000416159 CD276Q5ZPR3 534 aa14.65□□□□□ -0.06
PDLIM2-208ENST00000416159 SPATC1Q76KD6 591 aa14.65□□□□□ -0.06
PDLIM2-208ENST00000416159 RHOUQ7L0Q8 258 aa14.65□□□□□ -0.06
PDLIM2-208ENST00000416159 DPY19L4Q7Z388 723 aa14.65□□□□□ -0.06
PDLIM2-208ENST00000416159 ERI1Q8IV48 349 aaKnown RBP14.65□□□□□ -0.06
PDLIM2-208ENST00000416159 BOLLQ8N9W6 283 aaKnown RBP14.65□□□□□ -0.06
PDLIM2-208ENST00000416159 OR6N2Q8NGY6 317 aa14.65□□□□□ -0.06
PDLIM2-208ENST00000416159 CCDC124Q96CT7 223 aaKnown RBP14.65□□□□□ -0.06
PDLIM2-208ENST00000416159 ABHD6Q9BV23 337 aa14.65□□□□□ -0.06
PDLIM2-208ENST00000416159 MARCH7Q9H992 704 aa14.65□□□□□ -0.06
PDLIM2-208ENST00000416159 C1orf123Q9NWV4 160 aa14.65□□□□□ -0.06
PDLIM2-208ENST00000416159 NBEAL1Q6ZS30 2694 aa14.65□□□□□ -0.06
PDLIM2-208ENST00000416159 IGHV3OR16-10A0A075B7F0 116 aa14.64□□□□□ -0.07
PDLIM2-208ENST00000416159 TRAV40A0A0B4J280 105 aa14.64□□□□□ -0.07
PDLIM2-208ENST00000416159 FAM183AA6NL82 134 aa14.64□□□□□ -0.07
PDLIM2-208ENST00000416159 A6NLC8 198 aa14.64□□□□□ -0.07
PDLIM2-208ENST00000416159 AQP12BA6NM10 295 aa14.64□□□□□ -0.07
PDLIM2-208ENST00000416159 CLDN34H7C241 214 aa14.64□□□□□ -0.07
PDLIM2-208ENST00000416159 GNGT2O14610 69 aa14.64□□□□□ -0.07
PDLIM2-208ENST00000416159 ACOT8O14734 319 aa14.64□□□□□ -0.07
PDLIM2-208ENST00000416159 ENSAO43768 121 aaKnown RBP14.64□□□□□ -0.07
PDLIM2-208ENST00000416159 GRPP07492 148 aa14.64□□□□□ -0.07
PDLIM2-208ENST00000416159 PAICSP22234 425 aaKnown RBP14.64□□□□□ -0.07
PDLIM2-208ENST00000416159 OR8B8Q15620 311 aa14.64□□□□□ -0.07
PDLIM2-208ENST00000416159 TIGD6Q17RP2 521 aa14.64□□□□□ -0.07
PDLIM2-208ENST00000416159 SFRP4Q6FHJ7 346 aaPredicted RBP14.64□□□□□ -0.07
PDLIM2-208ENST00000416159 AQP12AQ8IXF9 295 aa14.64□□□□□ -0.07
PDLIM2-208ENST00000416159 ADGRG5Q8IZF4 528 aa14.64□□□□□ -0.07
PDLIM2-208ENST00000416159 IQCF1Q8N6M8 205 aa14.64□□□□□ -0.07
PDLIM2-208ENST00000416159 SGMS2Q8NHU3 365 aa14.64□□□□□ -0.07
PDLIM2-208ENST00000416159 RNF133Q8WVZ7 376 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms