RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 UNC119BA6NIH7 251 aa12.64□□□□□ -0.39
DDX56-202ENST00000415758 M0R135 149 aa12.64□□□□□ -0.39
DDX56-202ENST00000415758 GPR37O15354 613 aa12.64□□□□□ -0.39
DDX56-202ENST00000415758 MUC1P15941 1255 aaPredicted RBP12.64□□□□□ -0.39
DDX56-202ENST00000415758 GUCA2AQ02747 115 aa12.64□□□□□ -0.39
DDX56-202ENST00000415758 MZT1Q08AG7 82 aa12.64□□□□□ -0.39
DDX56-202ENST00000415758 RFX4Q33E94 735 aa12.64□□□□□ -0.39
DDX56-202ENST00000415758 SNAI3Q3KNW1 292 aa12.64□□□□□ -0.39
DDX56-202ENST00000415758 SLC35E4Q6ICL7 350 aa12.64□□□□□ -0.39
DDX56-202ENST00000415758 Q6ZPA2 131 aa12.64□□□□□ -0.39
DDX56-202ENST00000415758 ZNF826PQ6ZT77 177 aa12.64□□□□□ -0.39
DDX56-202ENST00000415758 REC114Q7Z4M0 266 aa12.64□□□□□ -0.39
DDX56-202ENST00000415758 ARPINQ7Z6K5 226 aa12.64□□□□□ -0.39
DDX56-202ENST00000415758 OR5R1Q8NH85 324 aa12.64□□□□□ -0.39
DDX56-202ENST00000415758 ST8SIA4Q92187 359 aa12.64□□□□□ -0.39
DDX56-202ENST00000415758 SPTSSAQ969W0 71 aa12.64□□□□□ -0.39
DDX56-202ENST00000415758 ZNF799Q96GE5 643 aa12.64□□□□□ -0.39
DDX56-202ENST00000415758 MAP6Q96JE9 813 aa12.64□□□□□ -0.39
DDX56-202ENST00000415758 ERMAPQ96PL5 475 aaPredicted RBP12.64□□□□□ -0.39
DDX56-202ENST00000415758 RNPEPL1Q9HAU8 725 aa12.64□□□□□ -0.39
DDX56-202ENST00000415758 KCNG2Q9UJ96 466 aa12.64□□□□□ -0.39
DDX56-202ENST00000415758 GGT3PA6NGU5 568 aa12.63□□□□□ -0.39
DDX56-202ENST00000415758 HMGB1P1B2RPK0 211 aaPredicted RBP12.63□□□□□ -0.39
DDX56-202ENST00000415758 RNASEK-C17orf49H0YIS7 233 aa12.63□□□□□ -0.39
DDX56-202ENST00000415758 RENP00797 406 aa12.63□□□□□ -0.39
DDX56-202ENST00000415758 SERPINA1P01009 418 aa12.63□□□□□ -0.39
DDX56-202ENST00000415758 GRPP07492 148 aa12.63□□□□□ -0.39
DDX56-202ENST00000415758 HIST1H1CP16403 213 aaKnown RBP12.63□□□□□ -0.39
DDX56-202ENST00000415758 RHCEP18577 417 aa12.63□□□□□ -0.39
DDX56-202ENST00000415758 LIPEQ05469 1076 aa12.63□□□□□ -0.39
DDX56-202ENST00000415758 HERPUD1Q15011 391 aa12.63□□□□□ -0.39
DDX56-202ENST00000415758 SEC23BQ15437 767 aa12.63□□□□□ -0.39
DDX56-202ENST00000415758 DRAM2Q6UX65 266 aa12.63□□□□□ -0.39
DDX56-202ENST00000415758 C11orf53Q8IXP5 236 aa12.63□□□□□ -0.39
DDX56-202ENST00000415758 DHRS1Q96LJ7 313 aa12.63□□□□□ -0.39
DDX56-202ENST00000415758 FUZQ9BT04 418 aa12.63□□□□□ -0.39
DDX56-202ENST00000415758 SEMA6AQ9H2E6 1030 aa12.63□□□□□ -0.39
DDX56-202ENST00000415758 KRCC1Q9NPI7 259 aaPredicted RBP12.63□□□□□ -0.39
DDX56-202ENST00000415758 RPRD1BQ9NQG5 326 aaKnown RBP12.63□□□□□ -0.39
DDX56-202ENST00000415758 C14orf119Q9NWQ9 140 aa12.63□□□□□ -0.39
DDX56-202ENST00000415758 MRPL22Q9NWU5 206 aaKnown RBP12.63□□□□□ -0.39
DDX56-202ENST00000415758 NDUFAF4Q9P032 175 aa12.63□□□□□ -0.39
DDX56-202ENST00000415758 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.62□□□□□ -0.39
DDX56-202ENST00000415758 TRBV4-1A0A0J9YWV2 114 aa12.62□□□□□ -0.39
DDX56-202ENST00000415758 A6NLC8 198 aa12.62□□□□□ -0.39
DDX56-202ENST00000415758 BHLHE40O14503 412 aa12.62□□□□□ -0.39
DDX56-202ENST00000415758 NPFFO15130 113 aa12.62□□□□□ -0.39
DDX56-202ENST00000415758 ANOS1P23352 680 aa12.62□□□□□ -0.39
DDX56-202ENST00000415758 EEF1B2P24534 225 aaKnown RBP12.62□□□□□ -0.39
DDX56-202ENST00000415758 DBPQ10586 325 aaPredicted RBP12.62□□□□□ -0.39
DDX56-202ENST00000415758 POU4F2Q12837 409 aa12.62□□□□□ -0.39
DDX56-202ENST00000415758 MICBQ29980 383 aa12.62□□□□□ -0.39
DDX56-202ENST00000415758 FGD3Q5JSP0 725 aa12.62□□□□□ -0.39
DDX56-202ENST00000415758 GLYATL3Q5SZD4 288 aa12.62□□□□□ -0.39
DDX56-202ENST00000415758 C11orf88Q6PI97 169 aa12.62□□□□□ -0.39
DDX56-202ENST00000415758 C1orf122Q6ZSJ8 110 aa12.62□□□□□ -0.39
DDX56-202ENST00000415758 Q6ZTK2 550 aa12.62□□□□□ -0.39
DDX56-202ENST00000415758 CMTM4Q8IZR5 234 aa12.62□□□□□ -0.39
DDX56-202ENST00000415758 FGFRL1Q8N441 504 aa12.62□□□□□ -0.39
DDX56-202ENST00000415758 Q8N7P7 452 aa12.62□□□□□ -0.39
DDX56-202ENST00000415758 OR4K13Q8NH42 304 aa12.62□□□□□ -0.39
DDX56-202ENST00000415758 OR2AE1Q8NHA4 323 aa12.62□□□□□ -0.39
DDX56-202ENST00000415758 C8orf46Q8TAG6 207 aa12.62□□□□□ -0.39
DDX56-202ENST00000415758 CFHR4Q92496 578 aa12.62□□□□□ -0.39
DDX56-202ENST00000415758 TNFRSF14Q92956 283 aa12.62□□□□□ -0.39
DDX56-202ENST00000415758 C12orf43Q96C57 262 aaKnown RBP12.62□□□□□ -0.39
DDX56-202ENST00000415758 OPA3Q9H6K4 179 aa12.62□□□□□ -0.39
DDX56-202ENST00000415758 PRPF19Q9UMS4 504 aaKnown RBP12.62□□□□□ -0.39
DDX56-202ENST00000415758 FAM32AQ9Y421 112 aaKnown RBP12.62□□□□□ -0.39
DDX56-202ENST00000415758 A0A1B0GW55 424 aa12.61□□□□□ -0.39
DDX56-202ENST00000415758 hCG_1807616A0A1W2PRN6 198 aa12.61□□□□□ -0.39
DDX56-202ENST00000415758 OR6C68A6NDL8 312 aa12.61□□□□□ -0.39
DDX56-202ENST00000415758 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.61□□□□□ -0.39
DDX56-202ENST00000415758 GSTA4O15217 222 aa12.61□□□□□ -0.39
DDX56-202ENST00000415758 SLC22A2O15244 555 aa12.61□□□□□ -0.39
DDX56-202ENST00000415758 PIN1P1O15428 100 aa12.61□□□□□ -0.39
DDX56-202ENST00000415758 IDH3BO43837 385 aa12.61□□□□□ -0.39
DDX56-202ENST00000415758 HLA-DQA2P01906 255 aa12.61□□□□□ -0.39
DDX56-202ENST00000415758 DUX4L2P0CJ85 424 aa12.61□□□□□ -0.39
DDX56-202ENST00000415758 DUX4L3P0CJ86 424 aa12.61□□□□□ -0.39
DDX56-202ENST00000415758 DUX4L4P0CJ87 422 aa12.61□□□□□ -0.39
DDX56-202ENST00000415758 DUX4L5P0CJ88 424 aa12.61□□□□□ -0.39
DDX56-202ENST00000415758 DUX4L6P0CJ89 424 aa12.61□□□□□ -0.39
DDX56-202ENST00000415758 DUX4L7P0CJ90 424 aa12.61□□□□□ -0.39
DDX56-202ENST00000415758 TROVE2P10155 538 aaKnown RBP eCLIP12.61□□□□□ -0.39
DDX56-202ENST00000415758 SLC6A6P31641 620 aa12.61□□□□□ -0.39
DDX56-202ENST00000415758 GRK5P34947 590 aa12.61□□□□□ -0.39
DDX56-202ENST00000415758 DDOSTP39656 456 aa12.61□□□□□ -0.39
DDX56-202ENST00000415758 TGM4P49221 684 aa12.61□□□□□ -0.39
DDX56-202ENST00000415758 PCK2Q16822 640 aa12.61□□□□□ -0.39
DDX56-202ENST00000415758 WDR38Q5JTN6 314 aa12.61□□□□□ -0.39
DDX56-202ENST00000415758 ATPAF1Q5TC12 328 aaPredicted RBP12.61□□□□□ -0.39
DDX56-202ENST00000415758 DUX4L9Q6RFH8 374 aaPredicted RBP12.61□□□□□ -0.39
DDX56-202ENST00000415758 SLC36A1Q7Z2H8 476 aa12.61□□□□□ -0.39
DDX56-202ENST00000415758 PPP1R14AQ96A00 147 aa12.61□□□□□ -0.39
DDX56-202ENST00000415758 SPSB4Q96A44 273 aa12.61□□□□□ -0.39
DDX56-202ENST00000415758 RCN3Q96D15 328 aa12.61□□□□□ -0.39
DDX56-202ENST00000415758 C7orf34Q96L11 122 aa12.61□□□□□ -0.39
DDX56-202ENST00000415758 CCL13Q99616 98 aa12.61□□□□□ -0.39
DDX56-202ENST00000415758 DCTN5Q9BTE1 182 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms