RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 C8orf59Q8N0T1 100 aaPredicted RBP12.46□□□□□ -0.41
LIMS1-206ENST00000414829 OR5AS1Q8N127 324 aa12.46□□□□□ -0.41
LIMS1-206ENST00000414829 ACBD7Q8N6N7 88 aa12.46□□□□□ -0.41
LIMS1-206ENST00000414829 CELF2-AS1Q8N7Q2 184 aa12.46□□□□□ -0.41
LIMS1-206ENST00000414829 BHLHE23Q8NDY6 225 aa12.46□□□□□ -0.41
LIMS1-206ENST00000414829 HAVCR2Q8TDQ0 301 aa12.46□□□□□ -0.41
LIMS1-206ENST00000414829 ADI1Q9BV57 179 aa12.46□□□□□ -0.41
LIMS1-206ENST00000414829 COPS3Q9UNS2 423 aa12.46□□□□□ -0.41
LIMS1-206ENST00000414829 N6AMT1Q9Y5N5 214 aa12.46□□□□□ -0.41
LIMS1-206ENST00000414829 A0A1B0GWJ7 208 aa12.45□□□□□ -0.42
LIMS1-206ENST00000414829 A0A1W2PQL4 384 aaPredicted RBP12.45□□□□□ -0.42
LIMS1-206ENST00000414829 RNF223E7ERA6 249 aa12.45□□□□□ -0.42
LIMS1-206ENST00000414829 DLGAP1O14490 977 aa12.45□□□□□ -0.42
LIMS1-206ENST00000414829 GMDSO60547 372 aa12.45□□□□□ -0.42
LIMS1-206ENST00000414829 MTRF1O75570 445 aaKnown RBP12.45□□□□□ -0.42
LIMS1-206ENST00000414829 NCR1O76036 304 aa12.45□□□□□ -0.42
LIMS1-206ENST00000414829 LY6HO94772 140 aa12.45□□□□□ -0.42
LIMS1-206ENST00000414829 HPXP02790 462 aa12.45□□□□□ -0.42
LIMS1-206ENST00000414829 TACSTD2P09758 323 aa12.45□□□□□ -0.42
LIMS1-206ENST00000414829 DBTP11182 482 aaKnown RBP12.45□□□□□ -0.42
LIMS1-206ENST00000414829 GABRB1P18505 474 aa12.45□□□□□ -0.42
LIMS1-206ENST00000414829 GNALP38405 381 aa12.45□□□□□ -0.42
LIMS1-206ENST00000414829 CRYBB2P43320 205 aa12.45□□□□□ -0.42
LIMS1-206ENST00000414829 GPR6P46095 362 aaPredicted RBP12.45□□□□□ -0.42
LIMS1-206ENST00000414829 HSPA13P48723 471 aa12.45□□□□□ -0.42
LIMS1-206ENST00000414829 ZNF91Q05481 1191 aa12.45□□□□□ -0.42
LIMS1-206ENST00000414829 RIPK1Q13546 671 aa12.45□□□□□ -0.42
LIMS1-206ENST00000414829 TSTQ16762 297 aaKnown RBP12.45□□□□□ -0.42
LIMS1-206ENST00000414829 GFOD2Q3B7J2 385 aa12.45□□□□□ -0.42
LIMS1-206ENST00000414829 KLHL22Q53GT1 634 aa12.45□□□□□ -0.42
LIMS1-206ENST00000414829 BCL2L15Q5TBC7 163 aa12.45□□□□□ -0.42
LIMS1-206ENST00000414829 NAA40Q86UY6 237 aa12.45□□□□□ -0.42
LIMS1-206ENST00000414829 COMMD2Q86X83 199 aa12.45□□□□□ -0.42
LIMS1-206ENST00000414829 OR2AE1Q8NHA4 323 aa12.45□□□□□ -0.42
LIMS1-206ENST00000414829 ERGIC1Q969X5 290 aa12.45□□□□□ -0.42
LIMS1-206ENST00000414829 BPESC1Q9GZL8 116 aa12.45□□□□□ -0.42
LIMS1-206ENST00000414829 BRD7Q9NPI1 651 aa12.45□□□□□ -0.42
LIMS1-206ENST00000414829 FAM206AQ9NX38 181 aa12.45□□□□□ -0.42
LIMS1-206ENST00000414829 NUFIP1Q9UHK0 495 aaKnown RBP12.45□□□□□ -0.42
LIMS1-206ENST00000414829 R4GMQ9 66 aa12.45□□□□□ -0.42
LIMS1-206ENST00000414829 hCG_38984A0A1B0GV85 526 aa12.44□□□□□ -0.42
LIMS1-206ENST00000414829 DAPL1A0PJW8 107 aa12.44□□□□□ -0.42
LIMS1-206ENST00000414829 METTL15A6NJ78 407 aa12.44□□□□□ -0.42
LIMS1-206ENST00000414829 VWC2LB2RUY7 222 aa12.44□□□□□ -0.42
LIMS1-206ENST00000414829 RPSAP08865 295 aaKnown RBP12.44□□□□□ -0.42
LIMS1-206ENST00000414829 CHN2P52757 468 aa12.44□□□□□ -0.42
LIMS1-206ENST00000414829 HCCSP53701 268 aa12.44□□□□□ -0.42
LIMS1-206ENST00000414829 MRPL28Q13084 256 aaKnown RBP12.44□□□□□ -0.42
LIMS1-206ENST00000414829 RIN1Q13671 783 aa12.44□□□□□ -0.42
LIMS1-206ENST00000414829 OR8G1Q15617 311 aa12.44□□□□□ -0.42
LIMS1-206ENST00000414829 OR8B8Q15620 311 aa12.44□□□□□ -0.42
LIMS1-206ENST00000414829 TMEM255AQ5JRV8 349 aa12.44□□□□□ -0.42
LIMS1-206ENST00000414829 YIPF7Q8N8F6 280 aa12.44□□□□□ -0.42
LIMS1-206ENST00000414829 PLPP7Q8NBV4 271 aa12.44□□□□□ -0.42
LIMS1-206ENST00000414829 CCDC54Q8NEL0 328 aa12.44□□□□□ -0.42
LIMS1-206ENST00000414829 OR8B12Q8NGG6 310 aa12.44□□□□□ -0.42
LIMS1-206ENST00000414829 OR56B2PQ8NGI1 322 aa12.44□□□□□ -0.42
LIMS1-206ENST00000414829 HPS1Q92902 700 aa12.44□□□□□ -0.42
LIMS1-206ENST00000414829 UBE2FQ969M7 185 aa12.44□□□□□ -0.42
LIMS1-206ENST00000414829 TBX5Q99593 518 aa12.44□□□□□ -0.42
LIMS1-206ENST00000414829 ADAT1Q9BUB4 502 aaKnown RBP12.44□□□□□ -0.42
LIMS1-206ENST00000414829 C14orf119Q9NWQ9 140 aa12.44□□□□□ -0.42
LIMS1-206ENST00000414829 EXOGQ9Y2C4 368 aaKnown RBP12.44□□□□□ -0.42
LIMS1-206ENST00000414829 SNX5Q9Y5X3 404 aa12.44□□□□□ -0.42
LIMS1-206ENST00000414829 LRRC30A6NM36 301 aa12.43□□□□□ -0.42
LIMS1-206ENST00000414829 ANXA2P2A6NMY6 339 aa12.43□□□□□ -0.42
LIMS1-206ENST00000414829 PSMD9O00233 223 aa12.43□□□□□ -0.42
LIMS1-206ENST00000414829 RP2O75695 350 aa12.43□□□□□ -0.42
LIMS1-206ENST00000414829 ADARB1P78563 741 aaKnown RBP12.43□□□□□ -0.42
LIMS1-206ENST00000414829 FAM3AP98173 230 aa12.43□□□□□ -0.42
LIMS1-206ENST00000414829 ZBTB37Q5TC79 503 aa12.43□□□□□ -0.42
LIMS1-206ENST00000414829 Q6ZR03 302 aa12.43□□□□□ -0.42
LIMS1-206ENST00000414829 C1orf87Q8N0U7 546 aa12.43□□□□□ -0.42
LIMS1-206ENST00000414829 OR10AD1Q8NGE0 317 aa12.43□□□□□ -0.42
LIMS1-206ENST00000414829 GTF3AQ92664 365 aaKnown RBP12.43□□□□□ -0.42
LIMS1-206ENST00000414829 RAB1CQ92928 201 aa12.43□□□□□ -0.42
LIMS1-206ENST00000414829 OR2V2Q96R30 315 aa12.43□□□□□ -0.42
LIMS1-206ENST00000414829 PBOV1Q9GZY1 135 aa12.43□□□□□ -0.42
LIMS1-206ENST00000414829 ZNF275Q9NSD4 429 aaPredicted RBP12.43□□□□□ -0.42
LIMS1-206ENST00000414829 MRPS18AQ9NVS2 196 aaKnown RBP12.43□□□□□ -0.42
LIMS1-206ENST00000414829 MRM2Q9UI43 246 aaKnown RBP12.43□□□□□ -0.42
LIMS1-206ENST00000414829 GTF2A1LQ9UNN4 478 aa12.43□□□□□ -0.42
LIMS1-206ENST00000414829 PPP1R3CQ9UQK1 317 aa12.43□□□□□ -0.42
LIMS1-206ENST00000414829 ARFGEF3Q5TH69 2177 aa12.43□□□□□ -0.42
LIMS1-206ENST00000414829 F8P00451 2351 aa12.42□□□□□ -0.42
LIMS1-206ENST00000414829 DHRS7CA6NNS2 312 aa12.42□□□□□ -0.42
LIMS1-206ENST00000414829 PPIHO43447 177 aaKnown RBP12.42□□□□□ -0.42
LIMS1-206ENST00000414829 APOL3O95236 402 aa12.42□□□□□ -0.42
LIMS1-206ENST00000414829 IRF2P14316 349 aa12.42□□□□□ -0.42
LIMS1-206ENST00000414829 ZNF12P17014 697 aa12.42□□□□□ -0.42
LIMS1-206ENST00000414829 CD200P41217 278 aa12.42□□□□□ -0.42
LIMS1-206ENST00000414829 MAP2K3P46734 347 aa12.42□□□□□ -0.42
LIMS1-206ENST00000414829 GSK3AP49840 483 aa12.42□□□□□ -0.42
LIMS1-206ENST00000414829 ZNF181Q2M3W8 571 aa12.42□□□□□ -0.42
LIMS1-206ENST00000414829 LIPNQ5VXI9 398 aa12.42□□□□□ -0.42
LIMS1-206ENST00000414829 SYS1Q8N2H4 156 aa12.42□□□□□ -0.42
LIMS1-206ENST00000414829 RFLNBQ8N5W9 214 aa12.42□□□□□ -0.42
LIMS1-206ENST00000414829 OR11L1Q8NGX0 322 aa12.42□□□□□ -0.42
LIMS1-206ENST00000414829 OR8S1Q8NH09 359 aa12.42□□□□□ -0.42
LIMS1-206ENST00000414829 CCL17Q92583 94 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms