RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 RRM2BQ7LG56 351 aa9.99□□□□□ -0.81
LIMS2-210ENST00000413578 MRPL21Q7Z2W9 205 aaKnown RBP9.99□□□□□ -0.81
LIMS2-210ENST00000413578 C11orf53Q8IXP5 236 aa9.99□□□□□ -0.81
LIMS2-210ENST00000413578 PDZD9Q8IXQ8 264 aa9.99□□□□□ -0.81
LIMS2-210ENST00000413578 FGFRL1Q8N441 504 aa9.99□□□□□ -0.81
LIMS2-210ENST00000413578 BOLLQ8N9W6 283 aaKnown RBP9.99□□□□□ -0.81
LIMS2-210ENST00000413578 SPERTQ8NA61 448 aa9.99□□□□□ -0.81
LIMS2-210ENST00000413578 SCCPDHQ8NBX0 429 aa9.99□□□□□ -0.81
LIMS2-210ENST00000413578 NPRL2Q8WTW4 380 aa9.99□□□□□ -0.81
LIMS2-210ENST00000413578 TNFRSF14Q92956 283 aa9.99□□□□□ -0.81
LIMS2-210ENST00000413578 ZNF799Q96GE5 643 aa9.99□□□□□ -0.81
LIMS2-210ENST00000413578 SEMA6AQ9H2E6 1030 aa9.99□□□□□ -0.81
LIMS2-210ENST00000413578 SRA1Q9HD15 236 aaKnown RBP9.99□□□□□ -0.81
LIMS2-210ENST00000413578 DUX4Q9UBX2 424 aa9.99□□□□□ -0.81
LIMS2-210ENST00000413578 NBEAL2Q6ZNJ1 2754 aa9.98□□□□□ -0.81
LIMS2-210ENST00000413578 ZNF816-ZNF321PA0A0X1KG74 233 aa9.98□□□□□ -0.81
LIMS2-210ENST00000413578 HMGB1P1B2RPK0 211 aaPredicted RBP9.98□□□□□ -0.81
LIMS2-210ENST00000413578 RNASEK-C17orf49H0YIS7 233 aa9.98□□□□□ -0.81
LIMS2-210ENST00000413578 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.98□□□□□ -0.81
LIMS2-210ENST00000413578 NME4O00746 187 aa9.98□□□□□ -0.81
LIMS2-210ENST00000413578 OPN1MWP04001 364 aa9.98□□□□□ -0.81
LIMS2-210ENST00000413578 FBP1P09467 338 aa9.98□□□□□ -0.81
LIMS2-210ENST00000413578 CSF1P09603 554 aa9.98□□□□□ -0.81
LIMS2-210ENST00000413578 OPN1MW2P0DN77 364 aa9.98□□□□□ -0.81
LIMS2-210ENST00000413578 OPN1MW3P0DN78 364 aa9.98□□□□□ -0.81
LIMS2-210ENST00000413578 RHCEP18577 417 aa9.98□□□□□ -0.81
LIMS2-210ENST00000413578 AMY2BP19961 511 aa9.98□□□□□ -0.81
LIMS2-210ENST00000413578 CENPAP49450 140 aa9.98□□□□□ -0.81
LIMS2-210ENST00000413578 TPTEP56180 551 aa9.98□□□□□ -0.81
LIMS2-210ENST00000413578 ELF3P78545 371 aaPredicted RBP9.98□□□□□ -0.81
LIMS2-210ENST00000413578 EGR3Q06889 387 aa9.98□□□□□ -0.81
LIMS2-210ENST00000413578 RFX4Q33E94 735 aa9.98□□□□□ -0.81
LIMS2-210ENST00000413578 GLYATL3Q5SZD4 288 aa9.98□□□□□ -0.81
LIMS2-210ENST00000413578 DHRS7BQ6IAN0 325 aaPredicted RBP9.98□□□□□ -0.81
LIMS2-210ENST00000413578 ARPINQ7Z6K5 226 aa9.98□□□□□ -0.81
LIMS2-210ENST00000413578 WDR86Q86TI4 376 aa9.98□□□□□ -0.81
LIMS2-210ENST00000413578 CYP4Z1Q86W10 505 aa9.98□□□□□ -0.81
LIMS2-210ENST00000413578 Q8N7P7 452 aa9.98□□□□□ -0.81
LIMS2-210ENST00000413578 OR2AE1Q8NHA4 323 aa9.98□□□□□ -0.81
LIMS2-210ENST00000413578 RCN3Q96D15 328 aa9.98□□□□□ -0.81
LIMS2-210ENST00000413578 C7orf34Q96L11 122 aa9.98□□□□□ -0.81
LIMS2-210ENST00000413578 ERMAPQ96PL5 475 aaPredicted RBP9.98□□□□□ -0.81
LIMS2-210ENST00000413578 OR52D1Q9H346 318 aa9.98□□□□□ -0.81
LIMS2-210ENST00000413578 RPRD1BQ9NQG5 326 aaKnown RBP9.98□□□□□ -0.81
LIMS2-210ENST00000413578 ADA2Q9NZK5 511 aa9.98□□□□□ -0.81
LIMS2-210ENST00000413578 FBLN5Q9UBX5 448 aa9.98□□□□□ -0.81
LIMS2-210ENST00000413578 KCNG2Q9UJ96 466 aa9.98□□□□□ -0.81
LIMS2-210ENST00000413578 OR6C68A6NDL8 312 aa9.97□□□□□ -0.81
LIMS2-210ENST00000413578 PSKH1P11801 424 aa9.97□□□□□ -0.81
LIMS2-210ENST00000413578 TGFBR2P37173 567 aa9.97□□□□□ -0.81
LIMS2-210ENST00000413578 GSK3BP49841 420 aa9.97□□□□□ -0.81
LIMS2-210ENST00000413578 POU4F2Q12837 409 aa9.97□□□□□ -0.81
LIMS2-210ENST00000413578 PCK2Q16822 640 aa9.97□□□□□ -0.81
LIMS2-210ENST00000413578 FGD3Q5JSP0 725 aa9.97□□□□□ -0.81
LIMS2-210ENST00000413578 GALNT4Q8N4A0 578 aa9.97□□□□□ -0.81
LIMS2-210ENST00000413578 OR56B2PQ8NGI1 322 aa9.97□□□□□ -0.81
LIMS2-210ENST00000413578 OR2AJ1Q8NGZ0 328 aa9.97□□□□□ -0.81
LIMS2-210ENST00000413578 OR4K13Q8NH42 304 aa9.97□□□□□ -0.81
LIMS2-210ENST00000413578 C8orf46Q8TAG6 207 aa9.97□□□□□ -0.81
LIMS2-210ENST00000413578 FANK1Q8TC84 345 aa9.97□□□□□ -0.81
LIMS2-210ENST00000413578 ST8SIA4Q92187 359 aa9.97□□□□□ -0.81
LIMS2-210ENST00000413578 SPSB4Q96A44 273 aa9.97□□□□□ -0.81
LIMS2-210ENST00000413578 DDOQ99489 341 aa9.97□□□□□ -0.81
LIMS2-210ENST00000413578 RNPEPL1Q9HAU8 725 aa9.97□□□□□ -0.81
LIMS2-210ENST00000413578 SIRT7Q9NRC8 400 aa9.97□□□□□ -0.81
LIMS2-210ENST00000413578 AURKCQ9UQB9 309 aa9.97□□□□□ -0.81
LIMS2-210ENST00000413578 CAB39Q9Y376 341 aaPredicted RBP9.97□□□□□ -0.81
LIMS2-210ENST00000413578 FAM96BQ9Y3D0 163 aa9.97□□□□□ -0.81
LIMS2-210ENST00000413578 NOTCH3Q9UM47 2321 aa9.97□□□□□ -0.81
LIMS2-210ENST00000413578 IGHV3OR15-7A0A075B7D8 119 aa9.96□□□□□ -0.82
LIMS2-210ENST00000413578 GGT3PA6NGU5 568 aa9.96□□□□□ -0.82
LIMS2-210ENST00000413578 SLC22A2O15244 555 aa9.96□□□□□ -0.82
LIMS2-210ENST00000413578 RENP00797 406 aa9.96□□□□□ -0.82
LIMS2-210ENST00000413578 GRPP07492 148 aa9.96□□□□□ -0.82
LIMS2-210ENST00000413578 MUC1P15941 1255 aaPredicted RBP9.96□□□□□ -0.82
LIMS2-210ENST00000413578 SLC6A6P31641 620 aa9.96□□□□□ -0.82
LIMS2-210ENST00000413578 SLC7A2P52569 658 aa9.96□□□□□ -0.82
LIMS2-210ENST00000413578 EFNB2P52799 333 aa9.96□□□□□ -0.82
LIMS2-210ENST00000413578 HERPUD1Q15011 391 aa9.96□□□□□ -0.82
LIMS2-210ENST00000413578 WDR38Q5JTN6 314 aa9.96□□□□□ -0.82
LIMS2-210ENST00000413578 ATPAF1Q5TC12 328 aaPredicted RBP9.96□□□□□ -0.82
LIMS2-210ENST00000413578 SLC35E4Q6ICL7 350 aa9.96□□□□□ -0.82
LIMS2-210ENST00000413578 DRAM2Q6UX65 266 aa9.96□□□□□ -0.82
LIMS2-210ENST00000413578 OR5R1Q8NH85 324 aa9.96□□□□□ -0.82
LIMS2-210ENST00000413578 CFHR4Q92496 578 aa9.96□□□□□ -0.82
LIMS2-210ENST00000413578 SPTSSAQ969W0 71 aa9.96□□□□□ -0.82
LIMS2-210ENST00000413578 CCL13Q99616 98 aa9.96□□□□□ -0.82
LIMS2-210ENST00000413578 FN3KQ9H479 309 aa9.96□□□□□ -0.82
LIMS2-210ENST00000413578 CAPN7Q9Y6W3 813 aa9.96□□□□□ -0.82
LIMS2-210ENST00000413578 MEGF11A6BM72 1044 aa9.95□□□□□ -0.82
LIMS2-210ENST00000413578 BTBD17A6NE02 478 aa9.95□□□□□ -0.82
LIMS2-210ENST00000413578 BHLHE40O14503 412 aa9.95□□□□□ -0.82
LIMS2-210ENST00000413578 NPFFO15130 113 aa9.95□□□□□ -0.82
LIMS2-210ENST00000413578 GPR37O15354 613 aa9.95□□□□□ -0.82
LIMS2-210ENST00000413578 IDH3BO43837 385 aa9.95□□□□□ -0.82
LIMS2-210ENST00000413578 DIRAS1O95057 198 aa9.95□□□□□ -0.82
LIMS2-210ENST00000413578 PRB2P02812 416 aaPredicted RBP9.95□□□□□ -0.82
LIMS2-210ENST00000413578 TROVE2P10155 538 aaKnown RBP eCLIP9.95□□□□□ -0.82
LIMS2-210ENST00000413578 NCK1P16333 377 aa9.95□□□□□ -0.82
LIMS2-210ENST00000413578 NOS3P29474 1203 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms