RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 SLC35B4Q969S0 331 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 ZNF48Q96MX3 618 aaPredicted RBP4.19□□□□□ -1.74
PTPN13-202ENST00000411767 GUCD1Q96NT3 240 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 DCBLD2Q96PD2 775 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 VGLL1Q99990 258 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 LINC00470Q9BZP3 86 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 PGAP2Q9UHJ9 254 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 PTRH2Q9Y3E5 179 aaKnown RBP4.19□□□□□ -1.74
PTPN13-202ENST00000411767 ASXL1Q8IXJ9 1541 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 ATP10AO60312 1499 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 SHANK2Q9UPX8 1470 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 LOC100289279A0A1B0GTE1 492 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 TCRBV3S1A0A5B6 114 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 LINC00587B1AMM8 73 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 VTNP04004 478 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 SEC11BP0C7V7 166 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 RNF224P0DH78 156 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 MAS1LP35410 378 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 HOXD13P35453 343 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 LGALS7P47929 136 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 CLDN20P56880 219 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 USP17L6PQ6QN14 398 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 SEZ6L2Q6UXD5 910 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 OSCARQ8IYS5 282 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 OR6S1Q8NH40 331 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 GMPPAQ96IJ6 420 aaPredicted RBP4.19□□□□□ -1.74
PTPN13-202ENST00000411767 FAM117AQ9C073 453 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 MBNL1Q9NR56 388 aaKnown RBP4.19□□□□□ -1.74
PTPN13-202ENST00000411767 NDUFB11Q9NX14 153 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 LAMTOR3Q9UHA4 124 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 RARRES3Q9UL19 164 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 GPR34Q9UPC5 381 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 H7C1H1 209 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 SAP18O00422 153 aaKnown RBP4.18□□□□□ -1.74
PTPN13-202ENST00000411767 PAGE4O60829 102 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 ATP1B2P14415 290 aaPredicted RBP4.18□□□□□ -1.74
PTPN13-202ENST00000411767 LAG3P18627 525 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 FCGR2BP31994 310 aaPredicted RBP4.18□□□□□ -1.74
PTPN13-202ENST00000411767 FCGR2CP31995 323 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 DYNLT3P51808 116 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 WNT4P56705 351 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 SPANXN1Q5VSR9 72 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 APOOLQ6UXV4 268 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 C20orf196Q8IYI0 205 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 TMEM123Q8N131 208 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 LRRC25Q8N386 305 aaPredicted RBP4.18□□□□□ -1.74
PTPN13-202ENST00000411767 TMEM86BQ8N661 226 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 SELENOIQ9C0D9 397 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 ADGRL1O94910 1474 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 GPATCH8Q9UKJ3 1502 aaKnown RBP4.18□□□□□ -1.74
PTPN13-202ENST00000411767 CREG1O75629 220 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 ONECUT2O95948 504 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 TACR2P21452 398 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 RPS20P60866 119 aaKnown RBP4.18□□□□□ -1.74
PTPN13-202ENST00000411767 DLEU7Q6UYE1 221 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 SLC39A5Q6ZMH5 540 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 TRMT2AQ8IZ69 625 aaKnown RBP4.18□□□□□ -1.74
PTPN13-202ENST00000411767 CFAP52Q8N1V2 620 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 VSTM2AQ8TAG5 236 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 GHSRQ92847 366 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 TNFRSF14Q92956 283 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 EMG1Q92979 244 aaKnown RBP4.18□□□□□ -1.74
PTPN13-202ENST00000411767 FYTTD1Q96QD9 318 aaKnown RBP4.18□□□□□ -1.74
PTPN13-202ENST00000411767 C1QTNF6Q9BXI9 259 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 LPAR5Q9H1C0 372 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 POPDC3Q9HBV1 291 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 KIF14Q15058 1648 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 ABCC10Q5T3U5 1492 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 TMEM269A0A1B0GVZ9 245 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 DIRC3C9JPN6 131 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 SMAD6O43541 496 aaKnown RBP4.18□□□□□ -1.74
PTPN13-202ENST00000411767 ADAP1O75689 374 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 APCSP02743 223 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 MPSTP25325 297 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 MEF2BQ02080 365 aaPredicted RBP4.18□□□□□ -1.74
PTPN13-202ENST00000411767 AANATQ16613 207 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 CEACAM21Q3KPI0 293 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 TCTE1Q5JU00 501 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 RNFT1Q5M7Z0 435 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 OR4F3Q6IEY1 312 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 TBPL2Q6SJ96 375 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 Q7L0L9 218 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 ZNF418Q8TF45 676 aaPredicted RBP4.18□□□□□ -1.74
PTPN13-202ENST00000411767 RANBP9Q96S59 729 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 KCNMB2Q9Y691 235 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 ARHGEF5Q12774 1597 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 NME2P1O60361 137 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 MRPL33O75394 65 aaKnown RBP4.18□□□□□ -1.74
PTPN13-202ENST00000411767 INHBBP09529 407 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 CD1DP15813 335 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 GP2P55259 537 aaKnown RBP4.18□□□□□ -1.74
PTPN13-202ENST00000411767 BACE1P56817 501 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 SPP2Q13103 211 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 GGTLC2Q14390 218 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 BEX5Q5H9J7 111 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 TEPPQ6URK8 271 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 DLK2Q6UY11 383 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 GRAMD2AQ8IUY3 354 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 OR6X1Q8NH79 312 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 TMEM19Q96HH6 336 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 138.4 ms