RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 HIST1H1CP16403 213 aaKnown RBP13.79□□□□□ -0.2
MRPL55-220ENST00000411464 ZNF823P16415 610 aa13.79□□□□□ -0.2
MRPL55-220ENST00000411464 SLC7A2P52569 658 aa13.79□□□□□ -0.2
MRPL55-220ENST00000411464 ZNF92Q03936 586 aa13.79□□□□□ -0.2
MRPL55-220ENST00000411464 DBPQ10586 325 aaPredicted RBP13.79□□□□□ -0.2
MRPL55-220ENST00000411464 POU4F2Q12837 409 aa13.79□□□□□ -0.2
MRPL55-220ENST00000411464 SEC23BQ15437 767 aa13.79□□□□□ -0.2
MRPL55-220ENST00000411464 C2orf68Q2NKX9 166 aa13.79□□□□□ -0.2
MRPL55-220ENST00000411464 CDONQ4KMG0 1287 aa13.79□□□□□ -0.2
MRPL55-220ENST00000411464 DHRS7BQ6IAN0 325 aaPredicted RBP13.79□□□□□ -0.2
MRPL55-220ENST00000411464 Q6ZSV7 163 aa13.79□□□□□ -0.2
MRPL55-220ENST00000411464 ZBTB46Q86UZ6 589 aa13.79□□□□□ -0.2
MRPL55-220ENST00000411464 FAM90A1Q86YD7 464 aa13.79□□□□□ -0.2
MRPL55-220ENST00000411464 RP9Q8TA86 221 aaKnown RBP13.79□□□□□ -0.2
MRPL55-220ENST00000411464 ST8SIA4Q92187 359 aa13.79□□□□□ -0.2
MRPL55-220ENST00000411464 IFT27Q9BW83 186 aa13.79□□□□□ -0.2
MRPL55-220ENST00000411464 C16orf95Q9H693 158 aa13.79□□□□□ -0.2
MRPL55-220ENST00000411464 FGFR1OP2Q9NVK5 253 aa13.79□□□□□ -0.2
MRPL55-220ENST00000411464 C14orf119Q9NWQ9 140 aa13.79□□□□□ -0.2
MRPL55-220ENST00000411464 RPUSD1Q9UJJ7 312 aaKnown RBP13.79□□□□□ -0.2
MRPL55-220ENST00000411464 KPTNQ9Y664 436 aa13.79□□□□□ -0.2
MRPL55-220ENST00000411464 WNK1Q9H4A3 2382 aa13.79□□□□□ -0.2
MRPL55-220ENST00000411464 NME4O00746 187 aa13.78□□□□□ -0.2
MRPL55-220ENST00000411464 NDUFAB1O14561 156 aa13.78□□□□□ -0.2
MRPL55-220ENST00000411464 NCK1P16333 377 aa13.78□□□□□ -0.2
MRPL55-220ENST00000411464 GSK3BP49841 420 aa13.78□□□□□ -0.2
MRPL55-220ENST00000411464 SNAI3Q3KNW1 292 aa13.78□□□□□ -0.2
MRPL55-220ENST00000411464 ZNF826PQ6ZT77 177 aa13.78□□□□□ -0.2
MRPL55-220ENST00000411464 VMO1Q7Z5L0 202 aa13.78□□□□□ -0.2
MRPL55-220ENST00000411464 PIP4P2Q8N4L2 257 aa13.78□□□□□ -0.2
MRPL55-220ENST00000411464 NPRL2Q8WTW4 380 aa13.78□□□□□ -0.2
MRPL55-220ENST00000411464 MAP6Q96JE9 813 aa13.78□□□□□ -0.2
MRPL55-220ENST00000411464 KCTD14Q9BQ13 255 aaPredicted RBP13.78□□□□□ -0.2
MRPL55-220ENST00000411464 OR52D1Q9H346 318 aa13.78□□□□□ -0.2
MRPL55-220ENST00000411464 ONECUT1Q9UBC0 465 aa13.78□□□□□ -0.2
MRPL55-220ENST00000411464 KAAG1Q9UBP8 84 aa13.78□□□□□ -0.2
MRPL55-220ENST00000411464 KCNG2Q9UJ96 466 aa13.78□□□□□ -0.2
MRPL55-220ENST00000411464 IGHV3OR15-7A0A075B7D8 119 aa13.77□□□□□ -0.21
MRPL55-220ENST00000411464 ZNF816-ZNF321PA0A0X1KG74 233 aa13.77□□□□□ -0.21
MRPL55-220ENST00000411464 OR6C68A6NDL8 312 aa13.77□□□□□ -0.21
MRPL55-220ENST00000411464 BHLHE40O14503 412 aa13.77□□□□□ -0.21
MRPL55-220ENST00000411464 FBP1P09467 338 aa13.77□□□□□ -0.21
MRPL55-220ENST00000411464 GRK5P34947 590 aa13.77□□□□□ -0.21
MRPL55-220ENST00000411464 MICBQ29980 383 aa13.77□□□□□ -0.21
MRPL55-220ENST00000411464 DRAM2Q6UX65 266 aa13.77□□□□□ -0.21
MRPL55-220ENST00000411464 CMTM4Q8IZR5 234 aa13.77□□□□□ -0.21
MRPL55-220ENST00000411464 LNX2Q8N448 690 aa13.77□□□□□ -0.21
MRPL55-220ENST00000411464 GCSAMQ8N6F7 178 aa13.77□□□□□ -0.21
MRPL55-220ENST00000411464 OR2AE1Q8NHA4 323 aa13.77□□□□□ -0.21
MRPL55-220ENST00000411464 FN3KQ9H479 309 aa13.77□□□□□ -0.21
MRPL55-220ENST00000411464 VPREB3Q9UKI3 123 aa13.77□□□□□ -0.21
MRPL55-220ENST00000411464 C5orf63A6NC05 138 aa13.76□□□□□ -0.21
MRPL55-220ENST00000411464 IDH3BO43837 385 aa13.76□□□□□ -0.21
MRPL55-220ENST00000411464 DIRAS1O95057 198 aa13.76□□□□□ -0.21
MRPL55-220ENST00000411464 LHBP01229 141 aa13.76□□□□□ -0.21
MRPL55-220ENST00000411464 CSF1P09603 554 aa13.76□□□□□ -0.21
MRPL55-220ENST00000411464 EEF1B2P24534 225 aaKnown RBP13.76□□□□□ -0.21
MRPL55-220ENST00000411464 TGFBR2P37173 567 aa13.76□□□□□ -0.21
MRPL55-220ENST00000411464 SMIM11AP58511 58 aa13.76□□□□□ -0.21
MRPL55-220ENST00000411464 GLYATL3Q5SZD4 288 aa13.76□□□□□ -0.21
MRPL55-220ENST00000411464 TEX36Q5VZQ5 186 aa13.76□□□□□ -0.21
MRPL55-220ENST00000411464 SDR9C7Q8NEX9 313 aa13.76□□□□□ -0.21
MRPL55-220ENST00000411464 OR8S1Q8NH09 359 aa13.76□□□□□ -0.21
MRPL55-220ENST00000411464 C7orf34Q96L11 122 aa13.76□□□□□ -0.21
MRPL55-220ENST00000411464 EFCAB1Q9HAE3 211 aa13.76□□□□□ -0.21
MRPL55-220ENST00000411464 MRPL22Q9NWU5 206 aaKnown RBP13.76□□□□□ -0.21
MRPL55-220ENST00000411464 N6AMT1Q9Y5N5 214 aa13.76□□□□□ -0.21
MRPL55-220ENST00000411464 ANKRD30BLA7E2S9 258 aa13.75□□□□□ -0.21
MRPL55-220ENST00000411464 GMNNO75496 209 aa13.75□□□□□ -0.21
MRPL55-220ENST00000411464 FCN3O75636 299 aa13.75□□□□□ -0.21
MRPL55-220ENST00000411464 TSPAN9O75954 239 aa13.75□□□□□ -0.21
MRPL55-220ENST00000411464 COX4I1P13073 169 aa13.75□□□□□ -0.21
MRPL55-220ENST00000411464 MUC1P15941 1255 aaPredicted RBP13.75□□□□□ -0.21
MRPL55-220ENST00000411464 GUCA2AQ02747 115 aa13.75□□□□□ -0.21
MRPL55-220ENST00000411464 TAF13Q15543 124 aa13.75□□□□□ -0.21
MRPL55-220ENST00000411464 FBLN7Q53RD9 439 aa13.75□□□□□ -0.21
MRPL55-220ENST00000411464 CGB2Q6NT52 195 aa13.75□□□□□ -0.21
MRPL55-220ENST00000411464 SLC36A1Q7Z2H8 476 aa13.75□□□□□ -0.21
MRPL55-220ENST00000411464 OR56B2PQ8NGI1 322 aa13.75□□□□□ -0.21
MRPL55-220ENST00000411464 OR4C15Q8NGM1 316 aa13.75□□□□□ -0.21
MRPL55-220ENST00000411464 DHRS1Q96LJ7 313 aa13.75□□□□□ -0.21
MRPL55-220ENST00000411464 DMRTB1Q96MA1 342 aa13.75□□□□□ -0.21
MRPL55-220ENST00000411464 CCL13Q99616 98 aa13.75□□□□□ -0.21
MRPL55-220ENST00000411464 FUZQ9BT04 418 aa13.75□□□□□ -0.21
MRPL55-220ENST00000411464 OPA3Q9H6K4 179 aa13.75□□□□□ -0.21
MRPL55-220ENST00000411464 RNPEPL1Q9HAU8 725 aa13.75□□□□□ -0.21
MRPL55-220ENST00000411464 SAMD4AQ9UPU9 718 aaKnown RBP13.75□□□□□ -0.21
MRPL55-220ENST00000411464 DOCK11Q5JSL3 2073 aa13.75□□□□□ -0.21
MRPL55-220ENST00000411464 ANKRD61A6NGH8 418 aa13.74□□□□□ -0.21
MRPL55-220ENST00000411464 GADD45GO95257 159 aa13.74□□□□□ -0.21
MRPL55-220ENST00000411464 PAHP00439 452 aa13.74□□□□□ -0.21
MRPL55-220ENST00000411464 OTX1P32242 354 aaPredicted RBP13.74□□□□□ -0.21
MRPL55-220ENST00000411464 IFNGR2P38484 337 aa13.74□□□□□ -0.21
MRPL55-220ENST00000411464 DDOSTP39656 456 aa13.74□□□□□ -0.21
MRPL55-220ENST00000411464 RPS27P42677 84 aaKnown RBP13.74□□□□□ -0.21
MRPL55-220ENST00000411464 EGR3Q06889 387 aa13.74□□□□□ -0.21
MRPL55-220ENST00000411464 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.74□□□□□ -0.21
MRPL55-220ENST00000411464 SLC35F1Q5T1Q4 408 aa13.74□□□□□ -0.21
MRPL55-220ENST00000411464 GLYATQ6IB77 296 aa13.74□□□□□ -0.21
MRPL55-220ENST00000411464 C8orf82Q6P1X6 216 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms