RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 OR6X1Q8NH79 312 aa10.07□□□□□ -0.8
SNX13-202ENST00000409604 ZNRF4Q8WWF5 429 aa10.07□□□□□ -0.8
SNX13-202ENST00000409604 AKAP1Q92667 903 aaKnown RBP eCLIP10.07□□□□□ -0.8
SNX13-202ENST00000409604 FLVCR1Q9Y5Y0 555 aa10.07□□□□□ -0.8
SNX13-202ENST00000409604 FLNBO75369 2602 aaKnown RBP10.07□□□□□ -0.8
SNX13-202ENST00000409604 PTP4A3O75365 173 aa10.06□□□□□ -0.8
SNX13-202ENST00000409604 CD53P19397 219 aa10.06□□□□□ -0.8
SNX13-202ENST00000409604 ADH6P28332 368 aa10.06□□□□□ -0.8
SNX13-202ENST00000409604 ZNF85Q03923 595 aa10.06□□□□□ -0.8
SNX13-202ENST00000409604 SSX1Q16384 188 aa10.06□□□□□ -0.8
SNX13-202ENST00000409604 VWA1Q6PCB0 445 aa10.06□□□□□ -0.8
SNX13-202ENST00000409604 OR1M1Q8NGA1 313 aa10.06□□□□□ -0.8
SNX13-202ENST00000409604 OR1J2Q8NGS2 313 aa10.06□□□□□ -0.8
SNX13-202ENST00000409604 ADAM19Q9H013 955 aa10.06□□□□□ -0.8
SNX13-202ENST00000409604 GPR35Q9HC97 309 aa10.06□□□□□ -0.8
SNX13-202ENST00000409604 PLCXD1Q9NUJ7 323 aa10.06□□□□□ -0.8
SNX13-202ENST00000409604 KCNIP1Q9NZI2 227 aa10.06□□□□□ -0.8
SNX13-202ENST00000409604 TRAPPC4Q9Y296 219 aa10.06□□□□□ -0.8
SNX13-202ENST00000409604 IGKV1D-43A0A0B4J1Z2 117 aa10.06□□□□□ -0.8
SNX13-202ENST00000409604 ZNF736B4DX44 427 aaPredicted RBP10.06□□□□□ -0.8
SNX13-202ENST00000409604 NEURL1O76050 574 aa10.06□□□□□ -0.8
SNX13-202ENST00000409604 ASAH2BP0C7U1 165 aa10.06□□□□□ -0.8
SNX13-202ENST00000409604 IL2RGP31785 369 aa10.06□□□□□ -0.8
SNX13-202ENST00000409604 RBP2P50120 134 aa10.06□□□□□ -0.8
SNX13-202ENST00000409604 ZNF45Q02386 682 aa10.06□□□□□ -0.8
SNX13-202ENST00000409604 XKRXQ6PP77 449 aa10.06□□□□□ -0.8
SNX13-202ENST00000409604 EGFL6Q8IUX8 553 aa10.06□□□□□ -0.8
SNX13-202ENST00000409604 ELMOD2Q8IZ81 293 aa10.06□□□□□ -0.8
SNX13-202ENST00000409604 SCCPDHQ8NBX0 429 aa10.06□□□□□ -0.8
SNX13-202ENST00000409604 C14orf166Q9Y224 244 aaKnown RBP10.06□□□□□ -0.8
SNX13-202ENST00000409604 KLK4Q9Y5K2 254 aa10.06□□□□□ -0.8
SNX13-202ENST00000409604 DSPPQ9NZW4 1301 aa10.06□□□□□ -0.8
SNX13-202ENST00000409604 FREM1Q5H8C1 2179 aa10.06□□□□□ -0.8
SNX13-202ENST00000409604 TRAV39A0A0B4J263 110 aa10.06□□□□□ -0.8
SNX13-202ENST00000409604 TRDV1A0A1B0GX56 115 aa10.06□□□□□ -0.8
SNX13-202ENST00000409604 GABARAPO95166 117 aa10.06□□□□□ -0.8
SNX13-202ENST00000409604 IL1AP01583 271 aa10.06□□□□□ -0.8
SNX13-202ENST00000409604 ZNF239Q16600 458 aaKnown RBP10.06□□□□□ -0.8
SNX13-202ENST00000409604 ZNF718Q3SXZ3 478 aa10.06□□□□□ -0.8
SNX13-202ENST00000409604 TBRG1Q3YBR2 411 aa10.06□□□□□ -0.8
SNX13-202ENST00000409604 ZFP69Q49AA0 526 aa10.06□□□□□ -0.8
SNX13-202ENST00000409604 RFESDQ8TAC1 157 aa10.06□□□□□ -0.8
SNX13-202ENST00000409604 COPZ2Q9P299 210 aa10.06□□□□□ -0.8
SNX13-202ENST00000409604 GNG12Q9UBI6 72 aa10.06□□□□□ -0.8
SNX13-202ENST00000409604 ADAM10O14672 748 aa10.05□□□□□ -0.8
SNX13-202ENST00000409604 TNFSF12O43508 249 aa10.05□□□□□ -0.8
SNX13-202ENST00000409604 ARR3P36575 388 aa10.05□□□□□ -0.8
SNX13-202ENST00000409604 FAM27E3Q08E93 113 aa10.05□□□□□ -0.8
SNX13-202ENST00000409604 RGS7BPQ6MZT1 257 aaPredicted RBP10.05□□□□□ -0.8
SNX13-202ENST00000409604 STAC2Q6ZMT1 411 aa10.05□□□□□ -0.8
SNX13-202ENST00000409604 OR5H6Q8NGV6 325 aa10.05□□□□□ -0.8
SNX13-202ENST00000409604 JAM3Q9BX67 310 aa10.05□□□□□ -0.8
SNX13-202ENST00000409604 KCNJ16Q9NPI9 418 aa10.05□□□□□ -0.8
SNX13-202ENST00000409604 EHFQ9NZC4 300 aa10.05□□□□□ -0.8
SNX13-202ENST00000409604 SIRT4Q9Y6E7 314 aaPredicted RBP10.05□□□□□ -0.8
SNX13-202ENST00000409604 CELSR3Q9NYQ7 3312 aa10.05□□□□□ -0.8
SNX13-202ENST00000409604 LRRK1Q38SD2 2015 aa10.05□□□□□ -0.8
SNX13-202ENST00000409604 A0A1W2PRD5 423 aa10.05□□□□□ -0.8
SNX13-202ENST00000409604 A0A1W2PRF3 423 aa10.05□□□□□ -0.8
SNX13-202ENST00000409604 A0A1W2PRM7 423 aa10.05□□□□□ -0.8
SNX13-202ENST00000409604 B4DXG7 233 aa10.05□□□□□ -0.8
SNX13-202ENST00000409604 ARPC1BO15143 372 aaKnown RBP10.05□□□□□ -0.8
SNX13-202ENST00000409604 ACTL6AO96019 429 aa10.05□□□□□ -0.8
SNX13-202ENST00000409604 ELK1P19419 428 aa10.05□□□□□ -0.8
SNX13-202ENST00000409604 WT1P19544 449 aaPredicted RBP10.05□□□□□ -0.8
SNX13-202ENST00000409604 CMPK2Q5EBM0 449 aa10.05□□□□□ -0.8
SNX13-202ENST00000409604 DOK3Q7L591 496 aa10.05□□□□□ -0.8
SNX13-202ENST00000409604 POC1BQ8TC44 478 aa10.05□□□□□ -0.8
SNX13-202ENST00000409604 SECTM1Q8WVN6 248 aa10.05□□□□□ -0.8
SNX13-202ENST00000409604 NTMQ9P121 344 aa10.05□□□□□ -0.8
SNX13-202ENST00000409604 DISC1C4P0D8 188 aa10.05□□□□□ -0.8
SNX13-202ENST00000409604 NXPH3O95157 252 aa10.05□□□□□ -0.8
SNX13-202ENST00000409604 TNK1Q13470 666 aa10.05□□□□□ -0.8
SNX13-202ENST00000409604 PAN3Q58A45 887 aaKnown RBP10.05□□□□□ -0.8
SNX13-202ENST00000409604 MDP1Q86V88 176 aa10.05□□□□□ -0.8
SNX13-202ENST00000409604 SLAMF9Q96A28 289 aa10.05□□□□□ -0.8
SNX13-202ENST00000409604 CHST6Q9GZX3 395 aa10.05□□□□□ -0.8
SNX13-202ENST00000409604 JMJD1CQ15652 2540 aa10.05□□□□□ -0.8
SNX13-202ENST00000409604 PMP2P02689 132 aa10.05□□□□□ -0.8
SNX13-202ENST00000409604 CCR6P51684 374 aa10.05□□□□□ -0.8
SNX13-202ENST00000409604 C2orf76Q3KRA6 126 aa10.05□□□□□ -0.8
SNX13-202ENST00000409604 PRR30Q53SZ7 412 aaPredicted RBP10.05□□□□□ -0.8
SNX13-202ENST00000409604 OR2B11Q5JQS5 317 aa10.05□□□□□ -0.8
SNX13-202ENST00000409604 SKA3Q8IX90 412 aa10.05□□□□□ -0.8
SNX13-202ENST00000409604 HAS2Q92819 552 aa10.05□□□□□ -0.8
SNX13-202ENST00000409604 LPAR2Q9HBW0 351 aa10.05□□□□□ -0.8
SNX13-202ENST00000409604 HIVEP3Q5T1R4 2406 aa10.04□□□□□ -0.8
SNX13-202ENST00000409604 USP9YO00507 2555 aaPredicted RBP10.04□□□□□ -0.8
SNX13-202ENST00000409604 OR6C6A6NF89 314 aa10.04□□□□□ -0.8
SNX13-202ENST00000409604 MCRIP1C9JLW8 97 aa10.04□□□□□ -0.8
SNX13-202ENST00000409604 NPIPB9F8W1W9 429 aa10.04□□□□□ -0.8
SNX13-202ENST00000409604 CBFA2T3O75081 653 aa10.04□□□□□ -0.8
SNX13-202ENST00000409604 SLC34A2O95436 690 aa10.04□□□□□ -0.8
SNX13-202ENST00000409604 GNB3P16520 340 aa10.04□□□□□ -0.8
SNX13-202ENST00000409604 SELEP16581 610 aa10.04□□□□□ -0.8
SNX13-202ENST00000409604 MST1P26927 711 aa10.04□□□□□ -0.8
SNX13-202ENST00000409604 LIMS1P48059 325 aa10.04□□□□□ -0.8
SNX13-202ENST00000409604 AKR1C2P52895 323 aa10.04□□□□□ -0.8
SNX13-202ENST00000409604 UCNP55089 124 aa10.04□□□□□ -0.8
SNX13-202ENST00000409604 RAB14P61106 215 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms