RNA–Protein interactions for RNA: ENST00000409435.5

SCN9A-202, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 5,967 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-202ENST00000409435 PCBP3P57721 371 aaKnown RBP6.58□□□□□ -1.36
SCN9A-202ENST00000409435 MFGE8Q08431 387 aaPredicted RBP6.58□□□□□ -1.36
SCN9A-202ENST00000409435 AANATQ16613 207 aa6.58□□□□□ -1.36
SCN9A-202ENST00000409435 ACOT6Q3I5F7 207 aaPredicted RBP6.58□□□□□ -1.36
SCN9A-202ENST00000409435 MRPL2Q5T653 305 aaKnown RBP6.58□□□□□ -1.36
SCN9A-202ENST00000409435 GGNBP1Q5YKI7 109 aa6.58□□□□□ -1.36
SCN9A-202ENST00000409435 CD276Q5ZPR3 534 aa6.58□□□□□ -1.36
SCN9A-202ENST00000409435 ISL2Q96A47 359 aa6.58□□□□□ -1.36
SCN9A-202ENST00000409435 OXGR1Q96P68 337 aa6.58□□□□□ -1.36
SCN9A-202ENST00000409435 DIRC2Q96SL1 478 aa6.58□□□□□ -1.36
SCN9A-202ENST00000409435 PSAT1Q9Y617 370 aa6.58□□□□□ -1.36
SCN9A-202ENST00000409435 LRRC37AA6NMS7 1700 aa6.58□□□□□ -1.36
SCN9A-202ENST00000409435 A0A1W2PQM1 296 aa6.58□□□□□ -1.36
SCN9A-202ENST00000409435 A0A1W2PR80 420 aa6.58□□□□□ -1.36
SCN9A-202ENST00000409435 F2RL2O00254 374 aa6.58□□□□□ -1.36
SCN9A-202ENST00000409435 ZG16O60844 167 aa6.58□□□□□ -1.36
SCN9A-202ENST00000409435 PPP1R3DO95685 299 aa6.58□□□□□ -1.36
SCN9A-202ENST00000409435 CR2P20023 1033 aa6.58□□□□□ -1.36
SCN9A-202ENST00000409435 OR1E2P47887 323 aa6.58□□□□□ -1.36
SCN9A-202ENST00000409435 WNT4P56705 351 aa6.58□□□□□ -1.36
SCN9A-202ENST00000409435 LAPTM4AQ15012 233 aa6.58□□□□□ -1.36
SCN9A-202ENST00000409435 ZNF628Q5EBL2 1059 aa6.58□□□□□ -1.36
SCN9A-202ENST00000409435 ZNF704Q6ZNC4 412 aaPredicted RBP6.58□□□□□ -1.36
SCN9A-202ENST00000409435 CLECL1Q8IZS7 167 aa6.58□□□□□ -1.36
SCN9A-202ENST00000409435 OR2Z1Q8NG97 314 aa6.58□□□□□ -1.36
SCN9A-202ENST00000409435 OR4M1Q8NGD0 313 aa6.58□□□□□ -1.36
SCN9A-202ENST00000409435 C16orf52Q8NHV5 167 aa6.58□□□□□ -1.36
SCN9A-202ENST00000409435 SFXN3Q9BWM7 321 aa6.58□□□□□ -1.36
SCN9A-202ENST00000409435 LIN7BQ9HAP6 207 aa6.58□□□□□ -1.36
SCN9A-202ENST00000409435 C1orf123Q9NWV4 160 aa6.58□□□□□ -1.36
SCN9A-202ENST00000409435 OR1A1Q9P1Q5 309 aa6.58□□□□□ -1.36
SCN9A-202ENST00000409435 ZDHHC2Q9UIJ5 367 aa6.58□□□□□ -1.36
SCN9A-202ENST00000409435 CEP290O15078 2479 aa6.58□□□□□ -1.36
SCN9A-202ENST00000409435 LOC100289279A0A1B0GTE1 492 aa6.57□□□□□ -1.36
SCN9A-202ENST00000409435 K7ENP7 123 aa6.57□□□□□ -1.36
SCN9A-202ENST00000409435 CCSO14618 274 aa6.57□□□□□ -1.36
SCN9A-202ENST00000409435 DVL1O14640 695 aa6.57□□□□□ -1.36
SCN9A-202ENST00000409435 PRAMEF4O60810 478 aa6.57□□□□□ -1.36
SCN9A-202ENST00000409435 ZNF780AO75290 641 aaPredicted RBP6.57□□□□□ -1.36
SCN9A-202ENST00000409435 SCO1O75880 301 aa6.57□□□□□ -1.36
SCN9A-202ENST00000409435 GLRA1P23415 457 aa6.57□□□□□ -1.36
SCN9A-202ENST00000409435 DVL1P1P54792 670 aaPredicted RBP6.57□□□□□ -1.36
SCN9A-202ENST00000409435 TAS2R46P59540 309 aa6.57□□□□□ -1.36
SCN9A-202ENST00000409435 OR1Q1Q15612 314 aa6.57□□□□□ -1.36
SCN9A-202ENST00000409435 PRAMEF9Q5VWM5 478 aa6.57□□□□□ -1.36
SCN9A-202ENST00000409435 INO80CQ6PI98 192 aaPredicted RBP6.57□□□□□ -1.36
SCN9A-202ENST00000409435 Q6ZN92 141 aa6.57□□□□□ -1.36
SCN9A-202ENST00000409435 BHLHE23Q8NDY6 225 aa6.57□□□□□ -1.36
SCN9A-202ENST00000409435 OR10D3Q8NH80 312 aa6.57□□□□□ -1.36
SCN9A-202ENST00000409435 LINC01560Q8TB33 94 aa6.57□□□□□ -1.36
SCN9A-202ENST00000409435 GMPPAQ96IJ6 420 aaPredicted RBP6.57□□□□□ -1.36
SCN9A-202ENST00000409435 FAAP24Q9BTP7 215 aa6.57□□□□□ -1.36
SCN9A-202ENST00000409435 OR2J1Q9GZK6 312 aa6.57□□□□□ -1.36
SCN9A-202ENST00000409435 GPR173Q9NS66 373 aa6.57□□□□□ -1.36
SCN9A-202ENST00000409435 ELOVL5Q9NYP7 299 aa6.57□□□□□ -1.36
SCN9A-202ENST00000409435 TMEM233B4DJY2 109 aa6.57□□□□□ -1.36
SCN9A-202ENST00000409435 MT-ATP6P00846 226 aa6.57□□□□□ -1.36
SCN9A-202ENST00000409435 RBP2P50120 134 aa6.57□□□□□ -1.36
SCN9A-202ENST00000409435 PKIAP61925 76 aa6.57□□□□□ -1.36
SCN9A-202ENST00000409435 FABP9Q0Z7S8 132 aa6.57□□□□□ -1.36
SCN9A-202ENST00000409435 TESK1Q15569 626 aa6.57□□□□□ -1.36
SCN9A-202ENST00000409435 GLYR1Q49A26 553 aaPredicted RBP6.57□□□□□ -1.36
SCN9A-202ENST00000409435 SFRP5Q5T4F7 317 aa6.57□□□□□ -1.36
SCN9A-202ENST00000409435 TIFABQ6ZNK6 161 aa6.57□□□□□ -1.36
SCN9A-202ENST00000409435 CDH26Q8IXH8 852 aa6.57□□□□□ -1.36
SCN9A-202ENST00000409435 NRMQ8IXM6 262 aa6.57□□□□□ -1.36
SCN9A-202ENST00000409435 GABRG1Q8N1C3 465 aa6.57□□□□□ -1.36
SCN9A-202ENST00000409435 OR13D1Q8NGV5 346 aa6.57□□□□□ -1.36
SCN9A-202ENST00000409435 WDR20Q8TBZ3 569 aa6.57□□□□□ -1.36
SCN9A-202ENST00000409435 POM121Q96HA1 1249 aa6.57□□□□□ -1.36
SCN9A-202ENST00000409435 ELOVL1Q9BW60 279 aa6.57□□□□□ -1.36
SCN9A-202ENST00000409435 BTNL2Q9UIR0 455 aa6.57□□□□□ -1.36
SCN9A-202ENST00000409435 ELOA3CA0A087WX78 387 aaPredicted RBP6.57□□□□□ -1.36
SCN9A-202ENST00000409435 TMEM82A0PJX8 343 aa6.57□□□□□ -1.36
SCN9A-202ENST00000409435 NCBP2LA6PVI3 153 aaKnown RBP6.57□□□□□ -1.36
SCN9A-202ENST00000409435 CEBPZOSA8MTT3 80 aa6.57□□□□□ -1.36
SCN9A-202ENST00000409435 K7EQM0 130 aa6.57□□□□□ -1.36
SCN9A-202ENST00000409435 BRS3P32247 399 aa6.57□□□□□ -1.36
SCN9A-202ENST00000409435 FHITP49789 147 aa6.57□□□□□ -1.36
SCN9A-202ENST00000409435 SNRPEP62304 92 aaKnown RBP6.57□□□□□ -1.36
SCN9A-202ENST00000409435 TBCEQ15813 527 aaPredicted RBP6.57□□□□□ -1.36
SCN9A-202ENST00000409435 NRN1LQ496H8 165 aa6.57□□□□□ -1.36
SCN9A-202ENST00000409435 OR4A47Q6IF82 309 aa6.57□□□□□ -1.36
SCN9A-202ENST00000409435 OR4A4PQ8NGN8 299 aa6.57□□□□□ -1.36
SCN9A-202ENST00000409435 OR5AK2Q8NH90 309 aa6.57□□□□□ -1.36
SCN9A-202ENST00000409435 PLPPR2Q96GM1 343 aa6.57□□□□□ -1.36
SCN9A-202ENST00000409435 WFIKKN1Q96NZ8 548 aa6.57□□□□□ -1.36
SCN9A-202ENST00000409435 TXLNGYQ9BZA5 131 aa6.57□□□□□ -1.36
SCN9A-202ENST00000409435 ZNF552Q9H707 407 aaPredicted RBP6.57□□□□□ -1.36
SCN9A-202ENST00000409435 BOLA1Q9Y3E2 137 aa6.57□□□□□ -1.36
SCN9A-202ENST00000409435 ATAD5Q96QE3 1844 aa6.57□□□□□ -1.36
SCN9A-202ENST00000409435 ZNF816-ZNF321PA0A0X1KG74 233 aa6.57□□□□□ -1.36
SCN9A-202ENST00000409435 SERPINA5P05154 406 aa6.57□□□□□ -1.36
SCN9A-202ENST00000409435 HOXB5P09067 269 aa6.57□□□□□ -1.36
SCN9A-202ENST00000409435 OR10J4P0C629 311 aa6.57□□□□□ -1.36
SCN9A-202ENST00000409435 PSMB1P20618 241 aaKnown RBP6.57□□□□□ -1.36
SCN9A-202ENST00000409435 RPS26P11Q5JNZ5 115 aaPredicted RBP6.57□□□□□ -1.36
SCN9A-202ENST00000409435 ACSM5Q6NUN0 579 aa6.57□□□□□ -1.36
SCN9A-202ENST00000409435 APOOLQ6UXV4 268 aa6.57□□□□□ -1.36
SCN9A-202ENST00000409435 C16orf47Q6ZP98 133 aaPredicted RBP6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms