RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 Q6ZSV7 163 aa6.4□□□□□ -1.38
LSM5-202ENST00000409292 TMPRSS11FQ6ZWK6 438 aa6.4□□□□□ -1.38
LSM5-202ENST00000409292 MBOAT2Q6ZWT7 520 aa6.4□□□□□ -1.38
LSM5-202ENST00000409292 TSPYL5Q86VY4 417 aaPredicted RBP6.4□□□□□ -1.38
LSM5-202ENST00000409292 LRRC75AQ8NAA5 344 aa6.4□□□□□ -1.38
LSM5-202ENST00000409292 FAM156AQ8NDB6 213 aa6.4□□□□□ -1.38
LSM5-202ENST00000409292 OR2T12Q8NG77 320 aa6.4□□□□□ -1.38
LSM5-202ENST00000409292 OR8S1Q8NH09 359 aa6.4□□□□□ -1.38
LSM5-202ENST00000409292 C10orf82Q8WW14 230 aa6.4□□□□□ -1.38
LSM5-202ENST00000409292 SLCO4A1Q96BD0 722 aa6.4□□□□□ -1.38
LSM5-202ENST00000409292 WDR89Q96FK6 387 aaPredicted RBP6.4□□□□□ -1.38
LSM5-202ENST00000409292 ATF6BQ99941 703 aa6.4□□□□□ -1.38
LSM5-202ENST00000409292 ADAT1Q9BUB4 502 aaKnown RBP6.4□□□□□ -1.38
LSM5-202ENST00000409292 TMEM120AQ9BXJ8 343 aa6.4□□□□□ -1.38
LSM5-202ENST00000409292 NSRP1Q9H0G5 558 aaKnown RBP6.4□□□□□ -1.38
LSM5-202ENST00000409292 ANKRD19PQ9H560 264 aa6.4□□□□□ -1.38
LSM5-202ENST00000409292 OPA3Q9H6K4 179 aa6.4□□□□□ -1.38
LSM5-202ENST00000409292 SP140LQ9H930 580 aa6.4□□□□□ -1.38
LSM5-202ENST00000409292 WDR76Q9H967 626 aa6.4□□□□□ -1.38
LSM5-202ENST00000409292 C1orf123Q9NWV4 160 aa6.4□□□□□ -1.38
LSM5-202ENST00000409292 FBLN5Q9UBX5 448 aa6.4□□□□□ -1.38
LSM5-202ENST00000409292 ADAM18Q9Y3Q7 739 aa6.4□□□□□ -1.38
LSM5-202ENST00000409292 TET2Q6N021 2002 aaPredicted RBP6.39□□□□□ -1.39
LSM5-202ENST00000409292 NKX6-3A6NJ46 265 aa6.39□□□□□ -1.39
LSM5-202ENST00000409292 ANKRD30BLA7E2S9 258 aa6.39□□□□□ -1.39
LSM5-202ENST00000409292 H3BUI4 141 aa6.39□□□□□ -1.39
LSM5-202ENST00000409292 SOCS2O14508 198 aa6.39□□□□□ -1.39
LSM5-202ENST00000409292 DVL1O14640 695 aa6.39□□□□□ -1.39
LSM5-202ENST00000409292 GMNNO75496 209 aa6.39□□□□□ -1.39
LSM5-202ENST00000409292 ZNF682O95780 498 aa6.39□□□□□ -1.39
LSM5-202ENST00000409292 GRPP07492 148 aa6.39□□□□□ -1.39
LSM5-202ENST00000409292 DBHP09172 617 aa6.39□□□□□ -1.39
LSM5-202ENST00000409292 TROVE2P10155 538 aaKnown RBP eCLIP6.39□□□□□ -1.39
LSM5-202ENST00000409292 MMP9P14780 707 aa6.39□□□□□ -1.39
LSM5-202ENST00000409292 MUC1P15941 1255 aaPredicted RBP6.39□□□□□ -1.39
LSM5-202ENST00000409292 ZNF823P16415 610 aa6.39□□□□□ -1.39
LSM5-202ENST00000409292 CA6P23280 308 aa6.39□□□□□ -1.39
LSM5-202ENST00000409292 DDOSTP39656 456 aa6.39□□□□□ -1.39
LSM5-202ENST00000409292 MDH1P40925 334 aaKnown RBP6.39□□□□□ -1.39
LSM5-202ENST00000409292 GPR4P46093 362 aa6.39□□□□□ -1.39
LSM5-202ENST00000409292 YAP1P46937 504 aaKnown RBP6.39□□□□□ -1.39
LSM5-202ENST00000409292 GSK3BP49841 420 aa6.39□□□□□ -1.39
LSM5-202ENST00000409292 HNRNPA0Q13151 305 aaKnown RBP6.39□□□□□ -1.39
LSM5-202ENST00000409292 MAB21L1Q13394 359 aa6.39□□□□□ -1.39
LSM5-202ENST00000409292 GK2Q14410 553 aaPredicted RBP6.39□□□□□ -1.39
LSM5-202ENST00000409292 KRT72Q14CN4 511 aa6.39□□□□□ -1.39
LSM5-202ENST00000409292 TAF13Q15543 124 aa6.39□□□□□ -1.39
LSM5-202ENST00000409292 BEAN1Q3B7T3 259 aa6.39□□□□□ -1.39
LSM5-202ENST00000409292 IFI44LQ53G44 452 aa6.39□□□□□ -1.39
LSM5-202ENST00000409292 MESTQ5EB52 335 aa6.39□□□□□ -1.39
LSM5-202ENST00000409292 COQ5Q5HYK3 327 aa6.39□□□□□ -1.39
LSM5-202ENST00000409292 CLEC12AQ5QGZ9 265 aa6.39□□□□□ -1.39
LSM5-202ENST00000409292 METAP1DQ6UB28 335 aaPredicted RBP6.39□□□□□ -1.39
LSM5-202ENST00000409292 DPY19L2P2Q6ZN68 376 aa6.39□□□□□ -1.39
LSM5-202ENST00000409292 VMO1Q7Z5L0 202 aa6.39□□□□□ -1.39
LSM5-202ENST00000409292 ARPINQ7Z6K5 226 aa6.39□□□□□ -1.39
LSM5-202ENST00000409292 PDZD9Q8IXQ8 264 aa6.39□□□□□ -1.39
LSM5-202ENST00000409292 FTMTQ8N4E7 242 aa6.39□□□□□ -1.39
LSM5-202ENST00000409292 C19orf18Q8NEA5 215 aa6.39□□□□□ -1.39
LSM5-202ENST00000409292 OR4F17Q8NGA8 305 aa6.39□□□□□ -1.39
LSM5-202ENST00000409292 TLCD1Q96CP7 247 aa6.39□□□□□ -1.39
LSM5-202ENST00000409292 OR4F4Q96R69 305 aa6.39□□□□□ -1.39
LSM5-202ENST00000409292 NUAK2Q9H093 628 aa6.39□□□□□ -1.39
LSM5-202ENST00000409292 SIRPDQ9H106 197 aa6.39□□□□□ -1.39
LSM5-202ENST00000409292 PPA2Q9H2U2 334 aa6.39□□□□□ -1.39
LSM5-202ENST00000409292 TMBIM4Q9HC24 238 aa6.39□□□□□ -1.39
LSM5-202ENST00000409292 INTS9Q9NV88 658 aaKnown RBP6.39□□□□□ -1.39
LSM5-202ENST00000409292 NECAP2Q9NVZ3 263 aa6.39□□□□□ -1.39
LSM5-202ENST00000409292 VSX1Q9NZR4 365 aaPredicted RBP6.39□□□□□ -1.39
LSM5-202ENST00000409292 MRPL15Q9P015 296 aaKnown RBP6.39□□□□□ -1.39
LSM5-202ENST00000409292 ZNRD1Q9P1U0 126 aa6.39□□□□□ -1.39
LSM5-202ENST00000409292 KAAG1Q9UBP8 84 aa6.39□□□□□ -1.39
LSM5-202ENST00000409292 KCNG2Q9UJ96 466 aa6.39□□□□□ -1.39
LSM5-202ENST00000409292 RPUSD1Q9UJJ7 312 aaKnown RBP6.39□□□□□ -1.39
LSM5-202ENST00000409292 RAB21Q9UL25 225 aa6.39□□□□□ -1.39
LSM5-202ENST00000409292 A4GNTQ9UNA3 340 aa6.39□□□□□ -1.39
LSM5-202ENST00000409292 A0A0G2JND7 137 aa6.38□□□□□ -1.39
LSM5-202ENST00000409292 A0A1B0GWJ7 208 aa6.38□□□□□ -1.39
LSM5-202ENST00000409292 A0A1W2PPH5 198 aa6.38□□□□□ -1.39
LSM5-202ENST00000409292 MEIOCA2RUB1 952 aa6.38□□□□□ -1.39
LSM5-202ENST00000409292 CD300LBA8K4G0 201 aa6.38□□□□□ -1.39
LSM5-202ENST00000409292 FAM220BPB1ANY3 271 aa6.38□□□□□ -1.39
LSM5-202ENST00000409292 G3V4G9 280 aa6.38□□□□□ -1.39
LSM5-202ENST00000409292 M0R135 149 aa6.38□□□□□ -1.39
LSM5-202ENST00000409292 BHLHE40O14503 412 aa6.38□□□□□ -1.39
LSM5-202ENST00000409292 NDUFAB1O14561 156 aa6.38□□□□□ -1.39
LSM5-202ENST00000409292 MRASO14807 208 aa6.38□□□□□ -1.39
LSM5-202ENST00000409292 NPFFO15130 113 aa6.38□□□□□ -1.39
LSM5-202ENST00000409292 OR10H3O60404 316 aa6.38□□□□□ -1.39
LSM5-202ENST00000409292 TIPRLO75663 272 aa6.38□□□□□ -1.39
LSM5-202ENST00000409292 GLCEO94923 617 aa6.38□□□□□ -1.39
LSM5-202ENST00000409292 GYPAP02724 150 aa6.38□□□□□ -1.39
LSM5-202ENST00000409292 SCG5P05408 212 aa6.38□□□□□ -1.39
LSM5-202ENST00000409292 ACSM4P0C7M7 580 aa6.38□□□□□ -1.39
LSM5-202ENST00000409292 POU1F1P28069 291 aa6.38□□□□□ -1.39
LSM5-202ENST00000409292 SLC6A6P31641 620 aa6.38□□□□□ -1.39
LSM5-202ENST00000409292 GNALP38405 381 aa6.38□□□□□ -1.39
LSM5-202ENST00000409292 PMELP40967 661 aa6.38□□□□□ -1.39
LSM5-202ENST00000409292 KRTAP10-3P60369 221 aa6.38□□□□□ -1.39
LSM5-202ENST00000409292 ACSM1Q08AH1 577 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms