RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 OGFOD3Q6PK18 319 aa7.43□□□□□ -1.22
SNX13-201ENST00000409076 RBMS3Q6XE24 437 aaKnown RBP7.43□□□□□ -1.22
SNX13-201ENST00000409076 WDFY1Q8IWB7 410 aa7.43□□□□□ -1.22
SNX13-201ENST00000409076 OR52N5Q8NH56 324 aa7.43□□□□□ -1.22
SNX13-201ENST00000409076 CDC6Q99741 560 aa7.43□□□□□ -1.22
SNX13-201ENST00000409076 AKIRIN1Q9H9L7 192 aaPredicted RBP7.43□□□□□ -1.22
SNX13-201ENST00000409076 ZNF304Q9HCX3 659 aa7.43□□□□□ -1.22
SNX13-201ENST00000409076 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.43□□□□□ -1.222e-7■■■■■ 54.2
SNX13-201ENST00000409076 LANCL2Q9NS86 450 aa7.43□□□□□ -1.22
SNX13-201ENST00000409076 FGF21Q9NSA1 209 aa7.43□□□□□ -1.22
SNX13-201ENST00000409076 PLEK2Q9NYT0 353 aa7.43□□□□□ -1.22
SNX13-201ENST00000409076 SERTAD3Q9UJW9 196 aa7.43□□□□□ -1.22
SNX13-201ENST00000409076 KCNK7Q9Y2U2 307 aa7.43□□□□□ -1.22
SNX13-201ENST00000409076 AKAP6Q13023 2319 aa7.43□□□□□ -1.22
SNX13-201ENST00000409076 hCG_1809904A0A1W2PP81 198 aa7.43□□□□□ -1.22
SNX13-201ENST00000409076 A0A1W2PR64 198 aa7.43□□□□□ -1.22
SNX13-201ENST00000409076 A0A1W2PRV1 198 aa7.43□□□□□ -1.22
SNX13-201ENST00000409076 RFPL4AA6NLU0 287 aa7.43□□□□□ -1.22
SNX13-201ENST00000409076 RFPL4AL1F8VTS6 287 aa7.43□□□□□ -1.22
SNX13-201ENST00000409076 SPP1P10451 314 aa7.43□□□□□ -1.22
SNX13-201ENST00000409076 ANOS1P23352 680 aa7.43□□□□□ -1.22
SNX13-201ENST00000409076 CSRP2Q16527 193 aa7.43□□□□□ -1.22
SNX13-201ENST00000409076 CLRN3Q8NCR9 226 aa7.43□□□□□ -1.22
SNX13-201ENST00000409076 ARL11Q969Q4 196 aa7.43□□□□□ -1.22
SNX13-201ENST00000409076 FANCFQ9NPI8 374 aa7.43□□□□□ -1.22
SNX13-201ENST00000409076 NIT2Q9NQR4 276 aa7.43□□□□□ -1.22
SNX13-201ENST00000409076 PLEKHJ1Q9NW61 149 aa7.43□□□□□ -1.22
SNX13-201ENST00000409076 MMP24Q9Y5R2 645 aa7.43□□□□□ -1.22
SNX13-201ENST00000409076 CADP27708 2225 aa7.43□□□□□ -1.22
SNX13-201ENST00000409076 MED13LQ71F56 2210 aa7.43□□□□□ -1.22
SNX13-201ENST00000409076 PKDREJQ9NTG1 2253 aa7.43□□□□□ -1.22
SNX13-201ENST00000409076 OR5H15A6NDH6 313 aa7.42□□□□□ -1.22
SNX13-201ENST00000409076 PMS2P2O95744 297 aa7.42□□□□□ -1.22
SNX13-201ENST00000409076 ZNF43P17038 809 aa7.42□□□□□ -1.22
SNX13-201ENST00000409076 BMP5P22003 454 aa7.42□□□□□ -1.22
SNX13-201ENST00000409076 PPIAP62937 165 aaKnown RBP7.42□□□□□ -1.22
SNX13-201ENST00000409076 RPS27AP62979 156 aaKnown RBP7.42□□□□□ -1.22
SNX13-201ENST00000409076 UBA52P62987 128 aaKnown RBP7.42□□□□□ -1.22
SNX13-201ENST00000409076 C9orf40Q8IXQ3 194 aa7.42□□□□□ -1.22
SNX13-201ENST00000409076 MFSD8Q8NHS3 518 aa7.42□□□□□ -1.22
SNX13-201ENST00000409076 SLC22A8Q8TCC7 542 aa7.42□□□□□ -1.22
SNX13-201ENST00000409076 ELSPBP1Q96BH3 223 aa7.42□□□□□ -1.22
SNX13-201ENST00000409076 TM4SF19Q96DZ7 209 aa7.42□□□□□ -1.22
SNX13-201ENST00000409076 SULT4A1Q9BR01 284 aa7.42□□□□□ -1.22
SNX13-201ENST00000409076 EXOSC3Q9NQT5 275 aaKnown RBP7.42□□□□□ -1.22
SNX13-201ENST00000409076 ZNF581Q9P0T4 197 aa7.42□□□□□ -1.22
SNX13-201ENST00000409076 GDF2Q9UK05 429 aaPredicted RBP7.42□□□□□ -1.22
SNX13-201ENST00000409076 FREM1Q5H8C1 2179 aa7.42□□□□□ -1.22
SNX13-201ENST00000409076 C9orf170A2RU37 121 aa7.42□□□□□ -1.22
SNX13-201ENST00000409076 OR2M5A3KFT3 312 aa7.42□□□□□ -1.22
SNX13-201ENST00000409076 VSTM2BA6NLU5 285 aa7.42□□□□□ -1.22
SNX13-201ENST00000409076 PRAMEF26H0Y7S4 382 aa7.42□□□□□ -1.22
SNX13-201ENST00000409076 BET1O15155 118 aa7.42□□□□□ -1.22
SNX13-201ENST00000409076 ACTL6AO96019 429 aa7.42□□□□□ -1.22
SNX13-201ENST00000409076 POU2F2P09086 479 aa7.42□□□□□ -1.22
SNX13-201ENST00000409076 LAP3P28838 519 aa7.42□□□□□ -1.22
SNX13-201ENST00000409076 AGTR1P30556 359 aa7.42□□□□□ -1.22
SNX13-201ENST00000409076 RABIFP47224 123 aa7.42□□□□□ -1.22
SNX13-201ENST00000409076 ZNF121P58317 390 aaPredicted RBP7.42□□□□□ -1.22
SNX13-201ENST00000409076 SLC26A5P58743 744 aa7.42□□□□□ -1.22
SNX13-201ENST00000409076 HYAL1Q12794 435 aa7.42□□□□□ -1.22
SNX13-201ENST00000409076 Q6ZRG5 221 aa7.42□□□□□ -1.22
SNX13-201ENST00000409076 PPP1R3BQ86XI6 285 aa7.42□□□□□ -1.22
SNX13-201ENST00000409076 LDLRAD3Q86YD5 345 aa7.42□□□□□ -1.22
SNX13-201ENST00000409076 ZNF595Q8IYB9 648 aa7.42□□□□□ -1.22
SNX13-201ENST00000409076 CLEC1AQ8NC01 280 aa7.42□□□□□ -1.22
SNX13-201ENST00000409076 OR13C8Q8NGS7 320 aa7.42□□□□□ -1.22
SNX13-201ENST00000409076 FLVCR1-AS1Q8TAF5 88 aa7.42□□□□□ -1.22
SNX13-201ENST00000409076 REG4Q9BYZ8 158 aa7.42□□□□□ -1.22
SNX13-201ENST00000409076 PBOV1Q9GZY1 135 aa7.42□□□□□ -1.22
SNX13-201ENST00000409076 LMAN1LQ9HAT1 526 aa7.42□□□□□ -1.22
SNX13-201ENST00000409076 ZNF160Q9HCG1 818 aa7.42□□□□□ -1.22
SNX13-201ENST00000409076 ZNF629Q9UEG4 869 aaPredicted RBP7.42□□□□□ -1.22
SNX13-201ENST00000409076 KIF25Q9UIL4 384 aa7.42□□□□□ -1.22
SNX13-201ENST00000409076 DENND4AQ7Z401 1863 aa7.42□□□□□ -1.22
SNX13-201ENST00000409076 TTC28Q96AY4 2481 aa7.42□□□□□ -1.22
SNX13-201ENST00000409076 CFIP05156 583 aa7.42□□□□□ -1.22
SNX13-201ENST00000409076 CCL2P13500 99 aa7.42□□□□□ -1.22
SNX13-201ENST00000409076 NQO2P16083 231 aa7.42□□□□□ -1.22
SNX13-201ENST00000409076 PSMB6P28072 239 aa7.42□□□□□ -1.22
SNX13-201ENST00000409076 CAMLGP49069 296 aa7.42□□□□□ -1.22
SNX13-201ENST00000409076 MLF1P58340 268 aa7.42□□□□□ -1.22
SNX13-201ENST00000409076 IGFBP7Q16270 282 aa7.42□□□□□ -1.22
SNX13-201ENST00000409076 LY6G6FQ5SQ64 297 aa7.42□□□□□ -1.22
SNX13-201ENST00000409076 NCMAPQ5T1S8 102 aa7.42□□□□□ -1.22
SNX13-201ENST00000409076 OR1L3Q8NH93 324 aa7.42□□□□□ -1.22
SNX13-201ENST00000409076 FAM213BQ8TBF2 198 aa7.42□□□□□ -1.22
SNX13-201ENST00000409076 DAZLQ92904 295 aaKnown RBP7.42□□□□□ -1.22
SNX13-201ENST00000409076 PAPOLGQ9BWT3 736 aaKnown RBP7.42□□□□□ -1.22
SNX13-201ENST00000409076 RGCCQ9H4X1 137 aa7.42□□□□□ -1.22
SNX13-201ENST00000409076 DZANK1Q9NVP4 752 aa7.42□□□□□ -1.22
SNX13-201ENST00000409076 HIF3AQ9Y2N7 669 aa7.42□□□□□ -1.22
SNX13-201ENST00000409076 OBSL1O75147 1896 aa7.42□□□□□ -1.22
SNX13-201ENST00000409076 TRAV39A0A0B4J263 110 aa7.41□□□□□ -1.22
SNX13-201ENST00000409076 ARPC3O15145 178 aa7.41□□□□□ -1.22
SNX13-201ENST00000409076 GSTZ1O43708 216 aaPredicted RBP7.41□□□□□ -1.22
SNX13-201ENST00000409076 OR2J2O76002 312 aa7.41□□□□□ -1.22
SNX13-201ENST00000409076 CNOT4O95628 575 aaKnown RBP7.41□□□□□ -1.22
SNX13-201ENST00000409076 VSIG8P0DPA2 414 aa7.41□□□□□ -1.22
SNX13-201ENST00000409076 TPT1P13693 172 aaKnown RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms