RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 RCL1Q9Y2P8 373 aaKnown RBP11.42□□□□□ -0.58
HERC3-203ENST00000407637 THSD7BQ9C0I4 1608 aa11.42□□□□□ -0.58
HERC3-203ENST00000407637 RPLP1P05386 114 aaKnown RBP11.41□□□□□ -0.58
HERC3-203ENST00000407637 MMP7P09237 267 aaPredicted RBP11.41□□□□□ -0.58
HERC3-203ENST00000407637 PGA3P0DJD8 388 aa11.41□□□□□ -0.58
HERC3-203ENST00000407637 CCL14Q16627 93 aa11.41□□□□□ -0.58
HERC3-203ENST00000407637 ZAR1Q86SH2 424 aa11.41□□□□□ -0.58
HERC3-203ENST00000407637 TMEM183AQ8IXX5 376 aa11.41□□□□□ -0.58
HERC3-203ENST00000407637 COX18Q8N8Q8 333 aa11.41□□□□□ -0.58
HERC3-203ENST00000407637 FIBINQ8TAL6 211 aa11.41□□□□□ -0.58
HERC3-203ENST00000407637 FAM213BQ8TBF2 198 aa11.41□□□□□ -0.58
HERC3-203ENST00000407637 RNASEH2CQ8TDP1 164 aaKnown RBP11.41□□□□□ -0.58
HERC3-203ENST00000407637 RSPRY1Q96DX4 576 aa11.41□□□□□ -0.58
HERC3-203ENST00000407637 PITPNC1Q9UKF7 332 aa11.41□□□□□ -0.58
HERC3-203ENST00000407637 DHDHQ9UQ10 334 aa11.41□□□□□ -0.58
HERC3-203ENST00000407637 CHD3Q12873 2000 aaKnown RBP11.41□□□□□ -0.58
HERC3-203ENST00000407637 TLCD2A6NGC4 264 aa11.41□□□□□ -0.58
HERC3-203ENST00000407637 HSD17B6O14756 317 aa11.41□□□□□ -0.58
HERC3-203ENST00000407637 DFFBO76075 338 aa11.41□□□□□ -0.58
HERC3-203ENST00000407637 PNLIPP16233 465 aa11.41□□□□□ -0.58
HERC3-203ENST00000407637 GNB3P16520 340 aa11.41□□□□□ -0.58
HERC3-203ENST00000407637 LMO1P25800 156 aa11.41□□□□□ -0.58
HERC3-203ENST00000407637 MSX1P28360 303 aa11.41□□□□□ -0.58
HERC3-203ENST00000407637 PPM1FP49593 454 aaPredicted RBP11.41□□□□□ -0.58
HERC3-203ENST00000407637 FLT3LGP49771 235 aa11.41□□□□□ -0.58
HERC3-203ENST00000407637 CLDN6P56747 220 aa11.41□□□□□ -0.58
HERC3-203ENST00000407637 CEBPEQ15744 281 aa11.41□□□□□ -0.58
HERC3-203ENST00000407637 AADACL3Q5VUY0 350 aa11.41□□□□□ -0.58
HERC3-203ENST00000407637 TEX38Q6PEX7 206 aa11.41□□□□□ -0.58
HERC3-203ENST00000407637 TMEM156Q8N614 296 aa11.41□□□□□ -0.58
HERC3-203ENST00000407637 FAM46BQ96A09 425 aa11.41□□□□□ -0.58
HERC3-203ENST00000407637 ANKRD9Q96BM1 317 aaPredicted RBP11.41□□□□□ -0.58
HERC3-203ENST00000407637 SLC25A13Q9UJS0 675 aa11.41□□□□□ -0.58
HERC3-203ENST00000407637 FOXD3Q9UJU5 478 aaPredicted RBP11.41□□□□□ -0.58
HERC3-203ENST00000407637 LSM5Q9Y4Y9 91 aaKnown RBP11.41□□□□□ -0.58
HERC3-203ENST00000407637 A0A0A6YYH2 397 aa11.4□□□□□ -0.58
HERC3-203ENST00000407637 A6NJ64 397 aa11.4□□□□□ -0.58
HERC3-203ENST00000407637 DDNO94850 711 aaPredicted RBP11.4□□□□□ -0.58
HERC3-203ENST00000407637 METTL15P1P0C7V9 234 aa11.4□□□□□ -0.58
HERC3-203ENST00000407637 ERGP11308 486 aa11.4□□□□□ -0.58
HERC3-203ENST00000407637 OR1D2P34982 312 aa11.4□□□□□ -0.58
HERC3-203ENST00000407637 EMDP50402 254 aa11.4□□□□□ -0.58
HERC3-203ENST00000407637 GATMP50440 423 aa11.4□□□□□ -0.58
HERC3-203ENST00000407637 RAB35Q15286 201 aa11.4□□□□□ -0.58
HERC3-203ENST00000407637 TMEM35AQ53FP2 167 aa11.4□□□□□ -0.58
HERC3-203ENST00000407637 LRRC25Q8N386 305 aaPredicted RBP11.4□□□□□ -0.58
HERC3-203ENST00000407637 LINC01555Q8NAE3 123 aa11.4□□□□□ -0.58
HERC3-203ENST00000407637 OR4K15Q8NH41 348 aa11.4□□□□□ -0.58
HERC3-203ENST00000407637 CKLFQ9UBR5 152 aa11.4□□□□□ -0.58
HERC3-203ENST00000407637 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.4□□□□□ -0.58
HERC3-203ENST00000407637 ARPC3O15145 178 aa11.4□□□□□ -0.58
HERC3-203ENST00000407637 SEC11BP0C7V7 166 aa11.4□□□□□ -0.58
HERC3-203ENST00000407637 GLIPR1P48060 266 aa11.4□□□□□ -0.58
HERC3-203ENST00000407637 NTHL1P78549 312 aa11.4□□□□□ -0.58
HERC3-203ENST00000407637 CCL20P78556 96 aa11.4□□□□□ -0.58
HERC3-203ENST00000407637 TRMT12Q53H54 448 aaKnown RBP11.4□□□□□ -0.58
HERC3-203ENST00000407637 ARSJQ5FYB0 599 aaPredicted RBP11.4□□□□□ -0.58
HERC3-203ENST00000407637 RNF44Q7L0R7 432 aa11.4□□□□□ -0.58
HERC3-203ENST00000407637 PEG10Q86TG7 708 aaKnown RBP11.4□□□□□ -0.58
HERC3-203ENST00000407637 ZNF429Q86V71 674 aa11.4□□□□□ -0.58
HERC3-203ENST00000407637 C1orf87Q8N0U7 546 aa11.4□□□□□ -0.58
HERC3-203ENST00000407637 OR4D6Q8NGJ1 314 aa11.4□□□□□ -0.58
HERC3-203ENST00000407637 OR2I1PQ8NGU4 316 aa11.4□□□□□ -0.58
HERC3-203ENST00000407637 OR2L2Q8NH16 312 aa11.4□□□□□ -0.58
HERC3-203ENST00000407637 WFDC1Q9HC57 220 aa11.4□□□□□ -0.58
HERC3-203ENST00000407637 GPR132Q9UNW8 380 aa11.4□□□□□ -0.58
HERC3-203ENST00000407637 MEMO1Q9Y316 297 aa11.4□□□□□ -0.58
HERC3-203ENST00000407637 MTCH2Q9Y6C9 303 aa11.4□□□□□ -0.58
HERC3-203ENST00000407637 ZNF264O43296 627 aa11.39□□□□□ -0.59
HERC3-203ENST00000407637 PQBP1O60828 265 aaKnown RBP11.39□□□□□ -0.59
HERC3-203ENST00000407637 CA11O75493 328 aa11.39□□□□□ -0.59
HERC3-203ENST00000407637 AKT2P31751 481 aa11.39□□□□□ -0.59
HERC3-203ENST00000407637 SLC25A1P53007 311 aa11.39□□□□□ -0.59
HERC3-203ENST00000407637 SQSTM1Q13501 440 aa11.39□□□□□ -0.59
HERC3-203ENST00000407637 IAH1Q2TAA2 248 aaPredicted RBP11.39□□□□□ -0.59
HERC3-203ENST00000407637 NCR3LG1Q68D85 454 aa11.39□□□□□ -0.59
HERC3-203ENST00000407637 LCN10Q6JVE6 187 aa11.39□□□□□ -0.59
HERC3-203ENST00000407637 KIRREL2Q6UWL6 708 aa11.39□□□□□ -0.59
HERC3-203ENST00000407637 TMEM184AQ6ZMB5 413 aa11.39□□□□□ -0.59
HERC3-203ENST00000407637 TMEM182Q6ZP80 229 aaPredicted RBP11.39□□□□□ -0.59
HERC3-203ENST00000407637 SLC35G3Q8N808 338 aa11.39□□□□□ -0.59
HERC3-203ENST00000407637 ZNF385AQ96PM9 386 aaKnown RBP11.39□□□□□ -0.59
HERC3-203ENST00000407637 PRRX2Q99811 253 aa11.39□□□□□ -0.59
HERC3-203ENST00000407637 SYT3Q9BQG1 590 aa11.39□□□□□ -0.59
HERC3-203ENST00000407637 ARV1Q9H2C2 271 aa11.39□□□□□ -0.59
HERC3-203ENST00000407637 MKKSQ9NPJ1 570 aaPredicted RBP11.39□□□□□ -0.59
HERC3-203ENST00000407637 COLEC10Q9Y6Z7 277 aa11.39□□□□□ -0.59
HERC3-203ENST00000407637 DEDDO75618 318 aa11.39□□□□□ -0.59
HERC3-203ENST00000407637 SCGB1D2O95969 90 aa11.39□□□□□ -0.59
HERC3-203ENST00000407637 PNPP00491 289 aa11.39□□□□□ -0.59
HERC3-203ENST00000407637 ALOX5APP20292 161 aa11.39□□□□□ -0.59
HERC3-203ENST00000407637 FUT3P21217 361 aa11.39□□□□□ -0.59
HERC3-203ENST00000407637 CXCR1P25024 350 aa11.39□□□□□ -0.59
HERC3-203ENST00000407637 APOBEC1P41238 236 aaKnown RBP11.39□□□□□ -0.59
HERC3-203ENST00000407637 OR3A1P47881 315 aa11.39□□□□□ -0.59
HERC3-203ENST00000407637 ID2Q02363 134 aa11.39□□□□□ -0.59
HERC3-203ENST00000407637 ZIC1Q15915 447 aa11.39□□□□□ -0.59
HERC3-203ENST00000407637 PCK2Q16822 640 aa11.39□□□□□ -0.59
HERC3-203ENST00000407637 AARDQ4LEZ3 155 aa11.39□□□□□ -0.59
HERC3-203ENST00000407637 SAPCD1Q5SSQ6 148 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms