RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 LAMP3Q9UQV4 416 aa12.08□□□□□ -0.47
SNED1-205ENST00000405547 PTAFRP25105 342 aa12.08□□□□□ -0.48
SNED1-205ENST00000405547 CD27P26842 260 aa12.08□□□□□ -0.48
SNED1-205ENST00000405547 VEGFBP49765 207 aa12.08□□□□□ -0.48
SNED1-205ENST00000405547 RRADP55042 308 aa12.08□□□□□ -0.48
SNED1-205ENST00000405547 LAIR1Q6GTX8 287 aa12.08□□□□□ -0.48
SNED1-205ENST00000405547 LIMS2Q7Z4I7 341 aa12.08□□□□□ -0.48
SNED1-205ENST00000405547 OXGR1Q96P68 337 aa12.08□□□□□ -0.48
SNED1-205ENST00000405547 NGBQ9NPG2 151 aa12.08□□□□□ -0.48
SNED1-205ENST00000405547 SLCO1B1Q9Y6L6 691 aa12.08□□□□□ -0.48
SNED1-205ENST00000405547 SDK2Q58EX2 2172 aa12.08□□□□□ -0.48
SNED1-205ENST00000405547 FRG2CA6NGY1 282 aa12.08□□□□□ -0.48
SNED1-205ENST00000405547 SPNS2Q8IVW8 549 aa12.08□□□□□ -0.48
SNED1-205ENST00000405547 OTOSQ8NHW6 89 aa12.08□□□□□ -0.48
SNED1-205ENST00000405547 PELI1Q96FA3 418 aa12.08□□□□□ -0.48
SNED1-205ENST00000405547 ACTR3CQ9C0K3 210 aaPredicted RBP12.08□□□□□ -0.48
SNED1-205ENST00000405547 ZFP62Q8NB50 900 aaPredicted RBP12.08□□□□□ -0.48
SNED1-205ENST00000405547 PP6455Q8WZ26 134 aa12.08□□□□□ -0.48
SNED1-205ENST00000405547 MRGPRX4Q96LA9 322 aa12.08□□□□□ -0.48
SNED1-205ENST00000405547 GPR173Q9NS66 373 aa12.08□□□□□ -0.48
SNED1-205ENST00000405547 B9D1Q9UPM9 204 aa12.08□□□□□ -0.48
SNED1-205ENST00000405547 SLC22A13Q9Y226 551 aa12.08□□□□□ -0.48
SNED1-205ENST00000405547 TIMM10BQ9Y5J6 103 aa12.08□□□□□ -0.48
SNED1-205ENST00000405547 CT45A6P0DMU7 189 aa12.08□□□□□ -0.48
SNED1-205ENST00000405547 CT45A5P0DMU8 189 aa12.08□□□□□ -0.48
SNED1-205ENST00000405547 CT45A7P0DMV0 189 aa12.08□□□□□ -0.48
SNED1-205ENST00000405547 CT45A8P0DMV1 189 aa12.08□□□□□ -0.48
SNED1-205ENST00000405547 CT45A9P0DMV2 189 aa12.08□□□□□ -0.48
SNED1-205ENST00000405547 ST6GAL1P15907 406 aa12.08□□□□□ -0.48
SNED1-205ENST00000405547 OPRM1P35372 400 aa12.08□□□□□ -0.48
SNED1-205ENST00000405547 BAMBIQ13145 260 aa12.08□□□□□ -0.48
SNED1-205ENST00000405547 CT45A2Q5DJT8 189 aa12.08□□□□□ -0.48
SNED1-205ENST00000405547 CT45A1Q5HYN5 189 aa12.08□□□□□ -0.48
SNED1-205ENST00000405547 CT45A3Q8NHU0 189 aa12.08□□□□□ -0.48
SNED1-205ENST00000405547 TMEM18Q96B42 140 aa12.08□□□□□ -0.48
SNED1-205ENST00000405547 TVP23CQ96ET8 276 aa12.08□□□□□ -0.48
SNED1-205ENST00000405547 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.08□□□□□ -0.48
SNED1-205ENST00000405547 LIMS3P0CW19 117 aa12.08□□□□□ -0.48
SNED1-205ENST00000405547 LIMS4P0CW20 117 aa12.08□□□□□ -0.48
SNED1-205ENST00000405547 ATF1P18846 271 aa12.08□□□□□ -0.48
SNED1-205ENST00000405547 ZNF573Q86YE8 665 aa12.08□□□□□ -0.48
SNED1-205ENST00000405547 GAR1Q9NY12 217 aaKnown RBP12.08□□□□□ -0.48
SNED1-205ENST00000405547 SPTA1P02549 2419 aa12.08□□□□□ -0.48
SNED1-205ENST00000405547 CALCRP30988 508 aa12.08□□□□□ -0.48
SNED1-205ENST00000405547 PCBP4P57723 403 aaKnown RBP12.08□□□□□ -0.48
SNED1-205ENST00000405547 FZD2Q14332 565 aa12.08□□□□□ -0.48
SNED1-205ENST00000405547 FAM58AQ8N1B3 248 aa12.08□□□□□ -0.48
SNED1-205ENST00000405547 OR8D4Q8NGM9 314 aa12.08□□□□□ -0.48
SNED1-205ENST00000405547 SPACA5Q96QH8 159 aa12.08□□□□□ -0.48
SNED1-205ENST00000405547 RIMS4Q9H426 269 aaPredicted RBP12.08□□□□□ -0.48
SNED1-205ENST00000405547 OSGIN2Q9Y236 505 aa12.08□□□□□ -0.48
SNED1-205ENST00000405547 HDGFL3Q9Y3E1 203 aa12.08□□□□□ -0.48
SNED1-205ENST00000405547 GUSBP08236 651 aa12.07□□□□□ -0.48
SNED1-205ENST00000405547 ANKRD33Q7Z3H0 272 aa12.07□□□□□ -0.48
SNED1-205ENST00000405547 MRPL38Q96DV4 380 aaKnown RBP12.07□□□□□ -0.48
SNED1-205ENST00000405547 ZNF331Q9NQX6 463 aaPredicted RBP12.07□□□□□ -0.48
SNED1-205ENST00000405547 OR5H8P0DN80 308 aa12.07□□□□□ -0.48
SNED1-205ENST00000405547 PDZD11Q5EBL8 140 aa12.07□□□□□ -0.48
SNED1-205ENST00000405547 TMEM268Q5VZI3 342 aa12.07□□□□□ -0.48
SNED1-205ENST00000405547 CST9Q5W186 159 aa12.07□□□□□ -0.48
SNED1-205ENST00000405547 CMTM2Q8TAZ6 248 aa12.07□□□□□ -0.48
SNED1-205ENST00000405547 HMGCLL1Q8TB92 370 aa12.07□□□□□ -0.48
SNED1-205ENST00000405547 GLI3P10071 1580 aa12.07□□□□□ -0.48
SNED1-205ENST00000405547 LINC01553A4QN01 128 aa12.07□□□□□ -0.48
SNED1-205ENST00000405547 RNASEK-C17orf49H0YIS7 233 aa12.07□□□□□ -0.48
SNED1-205ENST00000405547 DHODHQ02127 395 aa12.07□□□□□ -0.48
SNED1-205ENST00000405547 C8orf82Q6P1X6 216 aaPredicted RBP12.07□□□□□ -0.48
SNED1-205ENST00000405547 OR4F5Q8NH21 305 aa12.07□□□□□ -0.48
SNED1-205ENST00000405547 FER1L6-AS2Q96M78 137 aa12.07□□□□□ -0.48
SNED1-205ENST00000405547 OR4F4Q96R69 305 aa12.07□□□□□ -0.48
SNED1-205ENST00000405547 SLC17A4Q9Y2C5 497 aa12.07□□□□□ -0.48
SNED1-205ENST00000405547 DOCK11Q5JSL3 2073 aa12.07□□□□□ -0.48
SNED1-205ENST00000405547 SPANXN5Q5MJ07 72 aa12.07□□□□□ -0.48
SNED1-205ENST00000405547 REEP6Q96HR9 211 aa12.07□□□□□ -0.48
SNED1-205ENST00000405547 CIB3Q96Q77 187 aaPredicted RBP12.07□□□□□ -0.48
SNED1-205ENST00000405547 PLRG1O43660 514 aaKnown RBP12.07□□□□□ -0.48
SNED1-205ENST00000405547 GLI4P10075 376 aa12.07□□□□□ -0.48
SNED1-205ENST00000405547 PI3P19957 117 aa12.07□□□□□ -0.48
SNED1-205ENST00000405547 ZNF121P58317 390 aaPredicted RBP12.07□□□□□ -0.48
SNED1-205ENST00000405547 HLXQ14774 488 aaPredicted RBP12.07□□□□□ -0.48
SNED1-205ENST00000405547 ACOT6Q3I5F7 207 aaPredicted RBP12.07□□□□□ -0.48
SNED1-205ENST00000405547 ZNF626Q68DY1 528 aa12.07□□□□□ -0.48
SNED1-205ENST00000405547 LHX4Q969G2 390 aa12.07□□□□□ -0.48
SNED1-205ENST00000405547 IDSB3KWA1 339 aa12.07□□□□□ -0.48
SNED1-205ENST00000405547 KCNJ3P48549 501 aa12.07□□□□□ -0.48
SNED1-205ENST00000405547 RPS19BP1Q86WX3 136 aaKnown RBP12.07□□□□□ -0.48
SNED1-205ENST00000405547 SLC38A6Q8IZM9 456 aa12.07□□□□□ -0.48
SNED1-205ENST00000405547 APH1AQ96BI3 265 aa12.07□□□□□ -0.48
SNED1-205ENST00000405547 WSB2Q9NYS7 404 aaPredicted RBP12.07□□□□□ -0.48
SNED1-205ENST00000405547 SSUH2Q9Y2M2 353 aa12.07□□□□□ -0.48
SNED1-205ENST00000405547 A0A0B4J2E0 115 aa12.06□□□□□ -0.48
SNED1-205ENST00000405547 A0A1B0GX12 115 aa12.06□□□□□ -0.48
SNED1-205ENST00000405547 WDR34Q96EX3 536 aa12.06□□□□□ -0.48
SNED1-205ENST00000405547 OR8B4Q96RC9 309 aa12.06□□□□□ -0.48
SNED1-205ENST00000405547 RAB5AP20339 215 aa12.06□□□□□ -0.48
SNED1-205ENST00000405547 KIAA2026Q5HYC2 2103 aa12.06□□□□□ -0.48
SNED1-205ENST00000405547 ST6GAL2Q96JF0 529 aa12.06□□□□□ -0.48
SNED1-205ENST00000405547 hCG_1809904A0A1W2PP81 198 aa12.06□□□□□ -0.48
SNED1-205ENST00000405547 A0A1W2PPE2 198 aa12.06□□□□□ -0.48
SNED1-205ENST00000405547 A0A1W2PR64 198 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms