RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 CX3CR1P49238 355 aa12.83□□□□□ -0.36
TPM1-207ENST00000403994 UBA52P62987 128 aaKnown RBP12.83□□□□□ -0.36
TPM1-207ENST00000403994 GRB2P62993 217 aaKnown RBP12.83□□□□□ -0.36
TPM1-207ENST00000403994 PAX8Q06710 450 aa12.83□□□□□ -0.36
TPM1-207ENST00000403994 TAF13Q15543 124 aa12.83□□□□□ -0.36
TPM1-207ENST00000403994 DCDC5Q6ZRR9 648 aa12.83□□□□□ -0.36
TPM1-207ENST00000403994 C19orf18Q8NEA5 215 aa12.83□□□□□ -0.36
TPM1-207ENST00000403994 GCDHQ92947 438 aaPredicted RBP12.83□□□□□ -0.36
TPM1-207ENST00000403994 PLEKHA8Q96JA3 519 aa12.83□□□□□ -0.36
TPM1-207ENST00000403994 FEVQ99581 238 aa12.83□□□□□ -0.36
TPM1-207ENST00000403994 CHID1Q9BWS9 393 aa12.83□□□□□ -0.36
TPM1-207ENST00000403994 C1orf21Q9H246 121 aa12.83□□□□□ -0.36
TPM1-207ENST00000403994 FN3KRPQ9HA64 309 aa12.83□□□□□ -0.36
TPM1-207ENST00000403994 NTN4Q9HB63 628 aa12.83□□□□□ -0.36
TPM1-207ENST00000403994 CENPMQ9NSP4 180 aa12.83□□□□□ -0.36
TPM1-207ENST00000403994 TAS2R1Q9NYW7 299 aa12.83□□□□□ -0.36
TPM1-207ENST00000403994 TMEM89A2RUT3 159 aa12.82□□□□□ -0.36
TPM1-207ENST00000403994 DNAJC9-AS1A6NH13 148 aa12.82□□□□□ -0.36
TPM1-207ENST00000403994 H3BN98 237 aa12.82□□□□□ -0.36
TPM1-207ENST00000403994 XRCC2O43543 280 aa12.82□□□□□ -0.36
TPM1-207ENST00000403994 PPIAL4GP0DN37 164 aa12.82□□□□□ -0.36
TPM1-207ENST00000403994 IGHV4-38-2P0DP08 117 aa12.82□□□□□ -0.36
TPM1-207ENST00000403994 BLVRAP53004 296 aa12.82□□□□□ -0.36
TPM1-207ENST00000403994 EIF2B1Q14232 305 aaKnown RBP12.82□□□□□ -0.36
TPM1-207ENST00000403994 LYPD2Q6UXB3 125 aa12.82□□□□□ -0.36
TPM1-207ENST00000403994 BTNL3Q6UXE8 466 aa12.82□□□□□ -0.36
TPM1-207ENST00000403994 DOK3Q7L591 496 aa12.82□□□□□ -0.36
TPM1-207ENST00000403994 DPY19L4Q7Z388 723 aa12.82□□□□□ -0.36
TPM1-207ENST00000403994 TMEM179BQ7Z7N9 219 aa12.82□□□□□ -0.36
TPM1-207ENST00000403994 ERI1Q8IV48 349 aaKnown RBP12.82□□□□□ -0.36
TPM1-207ENST00000403994 PARP8Q8N3A8 854 aa12.82□□□□□ -0.36
TPM1-207ENST00000403994 OR6N2Q8NGY6 317 aa12.82□□□□□ -0.36
TPM1-207ENST00000403994 GIPC3Q8TF64 312 aa12.82□□□□□ -0.36
TPM1-207ENST00000403994 RNF133Q8WVZ7 376 aa12.82□□□□□ -0.36
TPM1-207ENST00000403994 SPSB4Q96A44 273 aa12.82□□□□□ -0.36
TPM1-207ENST00000403994 INTS14Q96SY0 518 aa12.82□□□□□ -0.36
TPM1-207ENST00000403994 CLN8Q9UBY8 286 aa12.82□□□□□ -0.36
TPM1-207ENST00000403994 TRAV40A0A0B4J280 105 aa12.81□□□□□ -0.36
TPM1-207ENST00000403994 PSMB10P40306 273 aa12.81□□□□□ -0.36
TPM1-207ENST00000403994 LRRN1Q6UXK5 716 aa12.81□□□□□ -0.36
TPM1-207ENST00000403994 BCL6BQ8N143 479 aaPredicted RBP12.81□□□□□ -0.36
TPM1-207ENST00000403994 PLPP7Q8NBV4 271 aa12.81□□□□□ -0.36
TPM1-207ENST00000403994 CANT1Q8WVQ1 401 aa12.81□□□□□ -0.36
TPM1-207ENST00000403994 RAB40AQ8WXH6 277 aa12.81□□□□□ -0.36
TPM1-207ENST00000403994 UPRTQ96BW1 309 aa12.81□□□□□ -0.36
TPM1-207ENST00000403994 C1orf147Q96MC9 270 aaPredicted RBP12.81□□□□□ -0.36
TPM1-207ENST00000403994 ZNF48Q96MX3 618 aaPredicted RBP12.81□□□□□ -0.36
TPM1-207ENST00000403994 AMELYQ99218 206 aa12.81□□□□□ -0.36
TPM1-207ENST00000403994 THTPAQ9BU02 230 aa12.81□□□□□ -0.36
TPM1-207ENST00000403994 MMADHCQ9H3L0 296 aaPredicted RBP12.81□□□□□ -0.36
TPM1-207ENST00000403994 MARCH7Q9H992 704 aa12.81□□□□□ -0.36
TPM1-207ENST00000403994 RNF7Q9UBF6 113 aa12.81□□□□□ -0.36
TPM1-207ENST00000403994 CTSZQ9UBR2 303 aa12.81□□□□□ -0.36
TPM1-207ENST00000403994 N6AMT1Q9Y5N5 214 aa12.81□□□□□ -0.36
TPM1-207ENST00000403994 IGHV3OR16-10A0A075B7F0 116 aa12.8□□□□□ -0.36
TPM1-207ENST00000403994 AQP12BA6NM10 295 aa12.8□□□□□ -0.36
TPM1-207ENST00000403994 C22orf46C9J442 243 aa12.8□□□□□ -0.36
TPM1-207ENST00000403994 C3orf80F5H4A9 247 aa12.8□□□□□ -0.36
TPM1-207ENST00000403994 LGALS8O00214 317 aa12.8□□□□□ -0.36
TPM1-207ENST00000403994 TBX1O43435 398 aa12.8□□□□□ -0.36
TPM1-207ENST00000403994 GLCEO94923 617 aa12.8□□□□□ -0.36
TPM1-207ENST00000403994 ANXA2P07355 339 aaKnown RBP12.8□□□□□ -0.36
TPM1-207ENST00000403994 PAICSP22234 425 aaKnown RBP12.8□□□□□ -0.36
TPM1-207ENST00000403994 HSD11B1P28845 292 aa12.8□□□□□ -0.36
TPM1-207ENST00000403994 GSTT1P30711 240 aa12.8□□□□□ -0.36
TPM1-207ENST00000403994 OPRL1P41146 370 aa12.8□□□□□ -0.36
TPM1-207ENST00000403994 SLC15A1P46059 708 aa12.8□□□□□ -0.36
TPM1-207ENST00000403994 WDR25Q64LD2 544 aaPredicted RBP12.8□□□□□ -0.36
TPM1-207ENST00000403994 RBMS3Q6XE24 437 aaKnown RBP12.8□□□□□ -0.36
TPM1-207ENST00000403994 ZNF841Q6ZN19 808 aa12.8□□□□□ -0.36
TPM1-207ENST00000403994 SLC16A9Q7RTY1 509 aa12.8□□□□□ -0.36
TPM1-207ENST00000403994 PRSS45Q7RTY3 260 aa12.8□□□□□ -0.36
TPM1-207ENST00000403994 AQP12AQ8IXF9 295 aa12.8□□□□□ -0.36
TPM1-207ENST00000403994 TIGD4Q8IY51 512 aa12.8□□□□□ -0.36
TPM1-207ENST00000403994 OTULINQ96BN8 352 aa12.8□□□□□ -0.36
TPM1-207ENST00000403994 DUX5Q96PT3 197 aa12.8□□□□□ -0.36
TPM1-207ENST00000403994 NUDT16L1Q9BRJ7 211 aaKnown RBP12.8□□□□□ -0.36
TPM1-207ENST00000403994 ABHD6Q9BV23 337 aa12.8□□□□□ -0.36
TPM1-207ENST00000403994 TOR3AQ9H497 397 aa12.8□□□□□ -0.36
TPM1-207ENST00000403994 ZMAT3Q9HA38 289 aaKnown RBP12.8□□□□□ -0.36
TPM1-207ENST00000403994 DNAJC27Q9NZQ0 273 aa12.8□□□□□ -0.36
TPM1-207ENST00000403994 TRRAPQ9Y4A5 3859 aa12.79□□□□□ -0.36
TPM1-207ENST00000403994 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.79□□□□□ -0.36
TPM1-207ENST00000403994 hCG_38984A0A1B0GV85 526 aa12.79□□□□□ -0.36
TPM1-207ENST00000403994 A6NLC8 198 aa12.79□□□□□ -0.36
TPM1-207ENST00000403994 PLATP00750 562 aa12.79□□□□□ -0.36
TPM1-207ENST00000403994 POU1F1P28069 291 aa12.79□□□□□ -0.36
TPM1-207ENST00000403994 ZNF121P58317 390 aaPredicted RBP12.79□□□□□ -0.36
TPM1-207ENST00000403994 FAM3AP98173 230 aa12.79□□□□□ -0.36
TPM1-207ENST00000403994 TIGD6Q17RP2 521 aa12.79□□□□□ -0.36
TPM1-207ENST00000403994 SFRP4Q6FHJ7 346 aaPredicted RBP12.79□□□□□ -0.36
TPM1-207ENST00000403994 C9orf139Q6ZV77 190 aa12.79□□□□□ -0.36
TPM1-207ENST00000403994 HS3ST5Q8IZT8 346 aa12.79□□□□□ -0.36
TPM1-207ENST00000403994 BOLLQ8N9W6 283 aaKnown RBP12.79□□□□□ -0.36
TPM1-207ENST00000403994 SPERTQ8NA61 448 aa12.79□□□□□ -0.36
TPM1-207ENST00000403994 ZMYND19Q96E35 227 aaPredicted RBP12.79□□□□□ -0.36
TPM1-207ENST00000403994 REEP6Q96HR9 211 aa12.79□□□□□ -0.36
TPM1-207ENST00000403994 TECTBQ96PL2 329 aa12.79□□□□□ -0.36
TPM1-207ENST00000403994 SMURF1Q9HCE7 757 aa12.79□□□□□ -0.36
TPM1-207ENST00000403994 C1orf123Q9NWV4 160 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms