RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 CLVS2Q5SYC1 327 aa10.18□□□□□ -0.78
SKA3-203ENST00000400018 SHEQ5VZ18 495 aa10.18□□□□□ -0.78
SKA3-203ENST00000400018 ABHD12BQ7Z5M8 362 aaPredicted RBP10.18□□□□□ -0.78
SKA3-203ENST00000400018 CHAC2Q8WUX2 184 aa10.18□□□□□ -0.78
SKA3-203ENST00000400018 TSEN15Q8WW01 171 aaKnown RBP10.18□□□□□ -0.78
SKA3-203ENST00000400018 TMEM106AQ96A25 262 aa10.18□□□□□ -0.78
SKA3-203ENST00000400018 TMEM45BQ96B21 275 aa10.18□□□□□ -0.78
SKA3-203ENST00000400018 LYZL4Q96KX0 146 aa10.18□□□□□ -0.78
SKA3-203ENST00000400018 OR2H1Q9GZK4 316 aa10.18□□□□□ -0.78
SKA3-203ENST00000400018 PBOV1Q9GZY1 135 aa10.18□□□□□ -0.78
SKA3-203ENST00000400018 PARPBPQ9NWS1 579 aa10.18□□□□□ -0.78
SKA3-203ENST00000400018 FAM206AQ9NX38 181 aa10.18□□□□□ -0.78
SKA3-203ENST00000400018 SSR3Q9UNL2 185 aa10.18□□□□□ -0.78
SKA3-203ENST00000400018 FAM90A27PA6NNH2 459 aa10.17□□□□□ -0.78
SKA3-203ENST00000400018 CASKO14936 926 aa10.17□□□□□ -0.78
SKA3-203ENST00000400018 SRSF10O75494 262 aaKnown RBP10.17□□□□□ -0.78
SKA3-203ENST00000400018 MMP7P09237 267 aaPredicted RBP10.17□□□□□ -0.78
SKA3-203ENST00000400018 CBX5P45973 191 aa10.17□□□□□ -0.78
SKA3-203ENST00000400018 OR3A2P47893 321 aa10.17□□□□□ -0.78
SKA3-203ENST00000400018 GUSBP1Q15486 140 aa10.17□□□□□ -0.78
SKA3-203ENST00000400018 ZMAT1Q5H9K5 638 aa10.17□□□□□ -0.78
SKA3-203ENST00000400018 WNT2BQ93097 391 aa10.17□□□□□ -0.78
SKA3-203ENST00000400018 RFT1Q96AA3 541 aa10.17□□□□□ -0.78
SKA3-203ENST00000400018 MALT1Q9UDY8 824 aa10.17□□□□□ -0.78
SKA3-203ENST00000400018 NUP50Q9UKX7 468 aa10.17□□□□□ -0.78
SKA3-203ENST00000400018 LOC107986453A0A1B0GWG9 222 aa10.17□□□□□ -0.78
SKA3-203ENST00000400018 ZNF878C9JN71 531 aa10.17□□□□□ -0.78
SKA3-203ENST00000400018 OGG1O15527 345 aa10.17□□□□□ -0.78
SKA3-203ENST00000400018 NOS1APO75052 506 aaPredicted RBP10.17□□□□□ -0.78
SKA3-203ENST00000400018 PTTG1O95997 202 aa10.17□□□□□ -0.78
SKA3-203ENST00000400018 CGAP01215 116 aa10.17□□□□□ -0.78
SKA3-203ENST00000400018 LCATP04180 440 aa10.17□□□□□ -0.78
SKA3-203ENST00000400018 ACSM4P0C7M7 580 aa10.17□□□□□ -0.78
SKA3-203ENST00000400018 CALCBP10092 127 aa10.17□□□□□ -0.78
SKA3-203ENST00000400018 RNLSQ5VYX0 342 aa10.17□□□□□ -0.78
SKA3-203ENST00000400018 KCTD18Q6PI47 426 aaPredicted RBP10.17□□□□□ -0.78
SKA3-203ENST00000400018 PLPP7Q8NBV4 271 aa10.17□□□□□ -0.78
SKA3-203ENST00000400018 RELL2Q8NC24 303 aaPredicted RBP10.17□□□□□ -0.78
SKA3-203ENST00000400018 OR1K1Q8NGR3 316 aa10.17□□□□□ -0.78
SKA3-203ENST00000400018 DYNC2LI1Q8TCX1 351 aa10.17□□□□□ -0.78
SKA3-203ENST00000400018 DERL3Q96Q80 235 aa10.17□□□□□ -0.78
SKA3-203ENST00000400018 FYTTD1Q96QD9 318 aaKnown RBP10.17□□□□□ -0.78
SKA3-203ENST00000400018 GFI1Q99684 422 aa10.17□□□□□ -0.78
SKA3-203ENST00000400018 JAM3Q9BX67 310 aa10.17□□□□□ -0.78
SKA3-203ENST00000400018 BEX2Q9BXY8 128 aa10.17□□□□□ -0.78
SKA3-203ENST00000400018 GPR84Q9NQS5 396 aa10.17□□□□□ -0.78
SKA3-203ENST00000400018 ZNF175Q9Y473 711 aa10.17□□□□□ -0.78
SKA3-203ENST00000400018 TMEM14AQ9Y6G1 99 aa10.17□□□□□ -0.78
SKA3-203ENST00000400018 ANKHD1Q8IWZ3 2542 aaKnown RBP10.16□□□□□ -0.78
SKA3-203ENST00000400018 MBD3L4A6NDZ8 208 aaPredicted RBP10.16□□□□□ -0.78
SKA3-203ENST00000400018 MBD3L3A6NE82 208 aaPredicted RBP10.16□□□□□ -0.78
SKA3-203ENST00000400018 MBD3L5A6NJ08 208 aaPredicted RBP10.16□□□□□ -0.78
SKA3-203ENST00000400018 LEUTXA8MZ59 168 aa10.16□□□□□ -0.78
SKA3-203ENST00000400018 M0R135 149 aa10.16□□□□□ -0.78
SKA3-203ENST00000400018 SYNGR3O43761 229 aa10.16□□□□□ -0.78
SKA3-203ENST00000400018 LILRA1O75019 489 aa10.16□□□□□ -0.78
SKA3-203ENST00000400018 SELEP16581 610 aa10.16□□□□□ -0.78
SKA3-203ENST00000400018 EGR3Q06889 387 aa10.16□□□□□ -0.78
SKA3-203ENST00000400018 SPOCK1Q08629 439 aa10.16□□□□□ -0.78
SKA3-203ENST00000400018 ESCO2Q56NI9 601 aa10.16□□□□□ -0.78
SKA3-203ENST00000400018 ELFN2Q5R3F8 820 aa10.16□□□□□ -0.78
SKA3-203ENST00000400018 HES5Q5TA89 166 aa10.16□□□□□ -0.78
SKA3-203ENST00000400018 ANKRD16Q6P6B7 361 aa10.16□□□□□ -0.78
SKA3-203ENST00000400018 CATSPERDQ86XM0 798 aa10.16□□□□□ -0.78
SKA3-203ENST00000400018 SYS1Q8N2H4 156 aa10.16□□□□□ -0.78
SKA3-203ENST00000400018 MBD3L2Q8NHZ7 208 aaPredicted RBP10.16□□□□□ -0.78
SKA3-203ENST00000400018 FGGYQ96C11 551 aa10.16□□□□□ -0.78
SKA3-203ENST00000400018 ADAT3Q96EY9 351 aaPredicted RBP10.16□□□□□ -0.78
SKA3-203ENST00000400018 ZNF799Q96GE5 643 aa10.16□□□□□ -0.78
SKA3-203ENST00000400018 B3GNT2Q9NY97 397 aa10.16□□□□□ -0.78
SKA3-203ENST00000400018 PROCRQ9UNN8 238 aa10.16□□□□□ -0.78
SKA3-203ENST00000400018 OR14I1A6ND48 311 aa10.16□□□□□ -0.78
SKA3-203ENST00000400018 CCL21O00585 134 aa10.16□□□□□ -0.78
SKA3-203ENST00000400018 MRPS14O60783 128 aaKnown RBP10.16□□□□□ -0.78
SKA3-203ENST00000400018 HRGP04196 525 aa10.16□□□□□ -0.78
SKA3-203ENST00000400018 ROM1Q03395 351 aa10.16□□□□□ -0.78
SKA3-203ENST00000400018 ZNF181Q2M3W8 571 aa10.16□□□□□ -0.78
SKA3-203ENST00000400018 KRTCAP3Q53RY4 240 aa10.16□□□□□ -0.78
SKA3-203ENST00000400018 RPL22L1Q6P5R6 122 aaKnown RBP10.16□□□□□ -0.78
SKA3-203ENST00000400018 LINC00299Q6ZSB3 139 aa10.16□□□□□ -0.78
SKA3-203ENST00000400018 HDDC2Q7Z4H3 204 aa10.16□□□□□ -0.78
SKA3-203ENST00000400018 GABRG1Q8N1C3 465 aa10.16□□□□□ -0.78
SKA3-203ENST00000400018 GJC3Q8NFK1 279 aa10.16□□□□□ -0.78
SKA3-203ENST00000400018 OR5D18Q8NGL1 313 aa10.16□□□□□ -0.78
SKA3-203ENST00000400018 S100PBPQ96BU1 408 aa10.16□□□□□ -0.78
SKA3-203ENST00000400018 RNF170Q96K19 258 aa10.16□□□□□ -0.78
SKA3-203ENST00000400018 SLIRPQ9GZT3 109 aaKnown RBP10.16□□□□□ -0.78
SKA3-203ENST00000400018 INPP5EQ9NRR6 644 aa10.16□□□□□ -0.78
SKA3-203ENST00000400018 TAS2R4Q9NYW5 299 aa10.16□□□□□ -0.78
SKA3-203ENST00000400018 CGGBP1Q9UFW8 167 aaPredicted RBP10.16□□□□□ -0.78
SKA3-203ENST00000400018 R4GMQ9 66 aa10.16□□□□□ -0.78
SKA3-203ENST00000400018 SPG11Q96JI7 2443 aa10.16□□□□□ -0.78
SKA3-203ENST00000400018 WDR1O75083 606 aa10.15□□□□□ -0.78
SKA3-203ENST00000400018 RGS9O75916 674 aaPredicted RBP10.15□□□□□ -0.78
SKA3-203ENST00000400018 PLATP00750 562 aa10.15□□□□□ -0.78
SKA3-203ENST00000400018 FCER2P06734 321 aa10.15□□□□□ -0.78
SKA3-203ENST00000400018 FCGR2AP12318 317 aa10.15□□□□□ -0.78
SKA3-203ENST00000400018 ADRA2CP18825 462 aa10.15□□□□□ -0.78
SKA3-203ENST00000400018 GNLYP22749 145 aa10.15□□□□□ -0.78
SKA3-203ENST00000400018 ALKBH6Q3KRA9 238 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms