RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 GLCEO94923 617 aa11.23□□□□□ -0.61
VCX3A-202ENST00000398729 APOC1P02654 83 aa11.23□□□□□ -0.61
VCX3A-202ENST00000398729 SLC2A1P11166 492 aa11.23□□□□□ -0.61
VCX3A-202ENST00000398729 ANXA8P13928 327 aa11.23□□□□□ -0.61
VCX3A-202ENST00000398729 ZNF12P17014 697 aa11.23□□□□□ -0.61
VCX3A-202ENST00000398729 FPR2P25090 351 aa11.23□□□□□ -0.61
VCX3A-202ENST00000398729 HSD11B1P28845 292 aa11.23□□□□□ -0.61
VCX3A-202ENST00000398729 GSTT1P30711 240 aa11.23□□□□□ -0.61
VCX3A-202ENST00000398729 CX3CR1P49238 355 aa11.23□□□□□ -0.61
VCX3A-202ENST00000398729 COMPP49747 757 aaPredicted RBP11.23□□□□□ -0.61
VCX3A-202ENST00000398729 HILS1P60008 231 aa11.23□□□□□ -0.61
VCX3A-202ENST00000398729 GNB2P62879 340 aa11.23□□□□□ -0.61
VCX3A-202ENST00000398729 ZNF404Q494X3 552 aa11.23□□□□□ -0.61
VCX3A-202ENST00000398729 ARMCX4Q5H9R4 360 aa11.23□□□□□ -0.61
VCX3A-202ENST00000398729 PRAMEF6Q5VXH4 476 aa11.23□□□□□ -0.61
VCX3A-202ENST00000398729 SPATC1Q76KD6 591 aa11.23□□□□□ -0.61
VCX3A-202ENST00000398729 SHFQ7M4L6 423 aa11.23□□□□□ -0.61
VCX3A-202ENST00000398729 NLRC3Q7RTR2 1065 aa11.23□□□□□ -0.61
VCX3A-202ENST00000398729 DPY19L4Q7Z388 723 aa11.23□□□□□ -0.61
VCX3A-202ENST00000398729 KLBQ86Z14 1044 aa11.23□□□□□ -0.61
VCX3A-202ENST00000398729 BPIFB2Q8N4F0 458 aa11.23□□□□□ -0.61
VCX3A-202ENST00000398729 NEIL1Q96FI4 390 aaPredicted RBP11.23□□□□□ -0.61
VCX3A-202ENST00000398729 TMEM246Q9BRR3 403 aa11.23□□□□□ -0.61
VCX3A-202ENST00000398729 OR51V1Q9H2C8 321 aa11.23□□□□□ -0.61
VCX3A-202ENST00000398729 SP140LQ9H930 580 aa11.23□□□□□ -0.61
VCX3A-202ENST00000398729 FN3KRPQ9HA64 309 aa11.23□□□□□ -0.61
VCX3A-202ENST00000398729 UFSP2Q9NUQ7 469 aa11.23□□□□□ -0.61
VCX3A-202ENST00000398729 FAM53CQ9NYF3 392 aa11.23□□□□□ -0.61
VCX3A-202ENST00000398729 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.22□□□□□ -0.61
VCX3A-202ENST00000398729 C5orf63A6NC05 138 aa11.22□□□□□ -0.61
VCX3A-202ENST00000398729 PRR23D1E9PI22 279 aaPredicted RBP11.22□□□□□ -0.61
VCX3A-202ENST00000398729 TRIM77I1YAP6 450 aa11.22□□□□□ -0.61
VCX3A-202ENST00000398729 TBX1O43435 398 aa11.22□□□□□ -0.61
VCX3A-202ENST00000398729 FAM20BO75063 409 aa11.22□□□□□ -0.61
VCX3A-202ENST00000398729 FKBP6O75344 327 aa11.22□□□□□ -0.61
VCX3A-202ENST00000398729 DNAJC8O75937 253 aaPredicted RBP11.22□□□□□ -0.61
VCX3A-202ENST00000398729 FSHBP01225 129 aa11.22□□□□□ -0.61
VCX3A-202ENST00000398729 HMGN1P05114 100 aa11.22□□□□□ -0.61
VCX3A-202ENST00000398729 ANXA2P07355 339 aaKnown RBP11.22□□□□□ -0.61
VCX3A-202ENST00000398729 PRR23D2P0DMB1 279 aaPredicted RBP11.22□□□□□ -0.61
VCX3A-202ENST00000398729 OSMP13725 252 aa11.22□□□□□ -0.61
VCX3A-202ENST00000398729 DDOSTP39656 456 aa11.22□□□□□ -0.61
VCX3A-202ENST00000398729 CBX1P83916 185 aa11.22□□□□□ -0.61
VCX3A-202ENST00000398729 MZT1Q08AG7 82 aa11.22□□□□□ -0.61
VCX3A-202ENST00000398729 GINS1Q14691 196 aa11.22□□□□□ -0.61
VCX3A-202ENST00000398729 MPPED2Q15777 294 aa11.22□□□□□ -0.61
VCX3A-202ENST00000398729 FAM201AQ5SY85 155 aa11.22□□□□□ -0.61
VCX3A-202ENST00000398729 DCDC5Q6ZRR9 648 aa11.22□□□□□ -0.61
VCX3A-202ENST00000398729 RHOUQ7L0Q8 258 aa11.22□□□□□ -0.61
VCX3A-202ENST00000398729 HS3ST5Q8IZT8 346 aa11.22□□□□□ -0.61
VCX3A-202ENST00000398729 SPERTQ8NA61 448 aa11.22□□□□□ -0.61
VCX3A-202ENST00000398729 PLPP7Q8NBV4 271 aa11.22□□□□□ -0.61
VCX3A-202ENST00000398729 OR8B3Q8NGG8 313 aa11.22□□□□□ -0.61
VCX3A-202ENST00000398729 OR56B2PQ8NGI1 322 aa11.22□□□□□ -0.61
VCX3A-202ENST00000398729 RNF133Q8WVZ7 376 aa11.22□□□□□ -0.61
VCX3A-202ENST00000398729 SPSB4Q96A44 273 aa11.22□□□□□ -0.61
VCX3A-202ENST00000398729 SLC7A6OSQ96CW6 309 aaPredicted RBP11.22□□□□□ -0.61
VCX3A-202ENST00000398729 OR8B2Q96RD0 313 aa11.22□□□□□ -0.61
VCX3A-202ENST00000398729 SLC6A7Q99884 636 aa11.22□□□□□ -0.61
VCX3A-202ENST00000398729 ABHD6Q9BV23 337 aa11.22□□□□□ -0.61
VCX3A-202ENST00000398729 TEX12Q9BXU0 123 aa11.22□□□□□ -0.61
VCX3A-202ENST00000398729 MARCH7Q9H992 704 aa11.22□□□□□ -0.61
VCX3A-202ENST00000398729 DNAJB9Q9UBS3 223 aa11.22□□□□□ -0.61
VCX3A-202ENST00000398729 POMPQ9Y244 141 aa11.22□□□□□ -0.61
VCX3A-202ENST00000398729 TCRBV3S1A0A5B6 114 aa11.21□□□□□ -0.61
VCX3A-202ENST00000398729 ANKRD30BLA7E2S9 258 aa11.21□□□□□ -0.61
VCX3A-202ENST00000398729 PRKACGP22612 351 aa11.21□□□□□ -0.61
VCX3A-202ENST00000398729 ANOS1P23352 680 aa11.21□□□□□ -0.61
VCX3A-202ENST00000398729 CFL1P23528 166 aaKnown RBP11.21□□□□□ -0.61
VCX3A-202ENST00000398729 CDK5Q00535 292 aa11.21□□□□□ -0.61
VCX3A-202ENST00000398729 KCNJ8Q15842 424 aa11.21□□□□□ -0.61
VCX3A-202ENST00000398729 TIGD6Q17RP2 521 aa11.21□□□□□ -0.61
VCX3A-202ENST00000398729 PLBD1Q6P4A8 553 aa11.21□□□□□ -0.61
VCX3A-202ENST00000398729 BTNL3Q6UXE8 466 aa11.21□□□□□ -0.61
VCX3A-202ENST00000398729 TIGD4Q8IY51 512 aa11.21□□□□□ -0.61
VCX3A-202ENST00000398729 PAPD5Q8NDF8 572 aaKnown RBP11.21□□□□□ -0.61
VCX3A-202ENST00000398729 OR52H1Q8NGJ2 320 aa11.21□□□□□ -0.61
VCX3A-202ENST00000398729 SGMS2Q8NHU3 365 aa11.21□□□□□ -0.61
VCX3A-202ENST00000398729 FAM216AQ8WUB2 273 aa11.21□□□□□ -0.61
VCX3A-202ENST00000398729 C22orf15Q8WYQ4 148 aa11.21□□□□□ -0.61
VCX3A-202ENST00000398729 ZMYND19Q96E35 227 aaPredicted RBP11.21□□□□□ -0.61
VCX3A-202ENST00000398729 NTN4Q9HB63 628 aa11.21□□□□□ -0.61
VCX3A-202ENST00000398729 RNF7Q9UBF6 113 aa11.21□□□□□ -0.61
VCX3A-202ENST00000398729 NUP50Q9UKX7 468 aa11.21□□□□□ -0.61
VCX3A-202ENST00000398729 VWFP04275 2813 aa11.2□□□□□ -0.62
VCX3A-202ENST00000398729 TMEM89A2RUT3 159 aa11.2□□□□□ -0.62
VCX3A-202ENST00000398729 A6NLC8 198 aa11.2□□□□□ -0.62
VCX3A-202ENST00000398729 PRODHO43272 600 aa11.2□□□□□ -0.62
VCX3A-202ENST00000398729 PTBP3O95758 552 aaKnown RBP11.2□□□□□ -0.62
VCX3A-202ENST00000398729 H2BFMP0C1H6 154 aa11.2□□□□□ -0.62
VCX3A-202ENST00000398729 PITPNBP48739 271 aa11.2□□□□□ -0.62
VCX3A-202ENST00000398729 ZNF121P58317 390 aaPredicted RBP11.2□□□□□ -0.62
VCX3A-202ENST00000398729 ACTG1P63261 375 aa11.2□□□□□ -0.62
VCX3A-202ENST00000398729 FAM3AP98173 230 aa11.2□□□□□ -0.62
VCX3A-202ENST00000398729 PAX8Q06710 450 aa11.2□□□□□ -0.62
VCX3A-202ENST00000398729 KLHL12Q53G59 568 aa11.2□□□□□ -0.62
VCX3A-202ENST00000398729 LRRN1Q6UXK5 716 aa11.2□□□□□ -0.62
VCX3A-202ENST00000398729 RBMS3Q6XE24 437 aaKnown RBP11.2□□□□□ -0.62
VCX3A-202ENST00000398729 FAM57BQ71RH2 274 aa11.2□□□□□ -0.62
VCX3A-202ENST00000398729 SLC16A9Q7RTY1 509 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms