RNA–Protein interactions for RNA: ENST00000397942.3

SOCS6-201, Transcript of suppressor of cytokine signaling 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS6, Length 5,848 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS6-201ENST00000397942 PDZK1IP1Q13113 114 aa11.17□□□□□ -0.62
SOCS6-201ENST00000397942 TMEM128Q5BJH2 165 aa11.17□□□□□ -0.62
SOCS6-201ENST00000397942 CPNE4Q96A23 557 aaPredicted RBP11.17□□□□□ -0.62
SOCS6-201ENST00000397942 YBX2Q9Y2T7 364 aaKnown RBP11.17□□□□□ -0.62
SOCS6-201ENST00000397942 RER1O15258 196 aa11.17□□□□□ -0.62
SOCS6-201ENST00000397942 NKX2-1P43699 371 aaPredicted RBP11.17□□□□□ -0.62
SOCS6-201ENST00000397942 CRYBA2P53672 197 aa11.17□□□□□ -0.62
SOCS6-201ENST00000397942 SHEQ5VZ18 495 aa11.17□□□□□ -0.62
SOCS6-201ENST00000397942 OR6K3Q8NGY3 331 aa11.17□□□□□ -0.62
SOCS6-201ENST00000397942 FRZBQ92765 325 aa11.17□□□□□ -0.62
SOCS6-201ENST00000397942 CMBLQ96DG6 245 aa11.17□□□□□ -0.62
SOCS6-201ENST00000397942 DHRS9Q9BPW9 319 aa11.17□□□□□ -0.62
SOCS6-201ENST00000397942 TAF9BQ9HBM6 251 aa11.17□□□□□ -0.62
SOCS6-201ENST00000397942 GCM1Q9NP62 436 aa11.17□□□□□ -0.62
SOCS6-201ENST00000397942 RGS13O14921 159 aa11.17□□□□□ -0.62
SOCS6-201ENST00000397942 HMGB3O15347 200 aaKnown RBP11.17□□□□□ -0.62
SOCS6-201ENST00000397942 IFNA4P05014 189 aa11.17□□□□□ -0.62
SOCS6-201ENST00000397942 FOLR1P15328 257 aa11.17□□□□□ -0.62
SOCS6-201ENST00000397942 SUMO3P55854 103 aaPredicted RBP11.17□□□□□ -0.62
SOCS6-201ENST00000397942 ERVK-16P61578 105 aa11.17□□□□□ -0.62
SOCS6-201ENST00000397942 SLC25A26Q70HW3 274 aa11.17□□□□□ -0.62
SOCS6-201ENST00000397942 ARHGEF39Q8N4T4 335 aa11.17□□□□□ -0.62
SOCS6-201ENST00000397942 GNRHR2Q96P88 292 aa11.17□□□□□ -0.62
SOCS6-201ENST00000397942 ALKBH3Q96Q83 286 aaPredicted RBP11.17□□□□□ -0.62
SOCS6-201ENST00000397942 EXOSC3Q9NQT5 275 aaKnown RBP11.17□□□□□ -0.62
SOCS6-201ENST00000397942 A0A1W2PPV4 95 aa11.17□□□□□ -0.62
SOCS6-201ENST00000397942 CEBPZOSA8MTT3 80 aa11.17□□□□□ -0.62
SOCS6-201ENST00000397942 ATP6V1G2-DDX39BF2Z307 99 aa11.17□□□□□ -0.62
SOCS6-201ENST00000397942 LANCL1O43813 399 aa11.17□□□□□ -0.62
SOCS6-201ENST00000397942 CTAG2O75638 210 aa11.17□□□□□ -0.62
SOCS6-201ENST00000397942 CBR1P16152 277 aa11.17□□□□□ -0.62
SOCS6-201ENST00000397942 TMEM88Q6PEY1 159 aa11.17□□□□□ -0.62
SOCS6-201ENST00000397942 LYG2Q86SG7 212 aa11.17□□□□□ -0.62
SOCS6-201ENST00000397942 EPPINO95925 133 aa11.17□□□□□ -0.62
SOCS6-201ENST00000397942 IFNA10P01566 189 aa11.17□□□□□ -0.62
SOCS6-201ENST00000397942 IGHEP01854 428 aa11.17□□□□□ -0.62
SOCS6-201ENST00000397942 PRSS53Q2L4Q9 553 aa11.17□□□□□ -0.62
SOCS6-201ENST00000397942 OR1L3Q8NH93 324 aa11.17□□□□□ -0.62
SOCS6-201ENST00000397942 TMEM231Q9H6L2 316 aa11.17□□□□□ -0.62
SOCS6-201ENST00000397942 FAM166BA8MTA8 275 aa11.16□□□□□ -0.62
SOCS6-201ENST00000397942 TNFSF14O43557 240 aa11.16□□□□□ -0.62
SOCS6-201ENST00000397942 WDR1O75083 606 aa11.16□□□□□ -0.62
SOCS6-201ENST00000397942 NXPH2O95156 264 aa11.16□□□□□ -0.62
SOCS6-201ENST00000397942 CT45A8P0DMV1 189 aa11.16□□□□□ -0.62
SOCS6-201ENST00000397942 CT45A9P0DMV2 189 aa11.16□□□□□ -0.62
SOCS6-201ENST00000397942 CT45A2Q5DJT8 189 aa11.16□□□□□ -0.62
SOCS6-201ENST00000397942 PP6455Q8WZ26 134 aa11.16□□□□□ -0.62
SOCS6-201ENST00000397942 ARL5BQ96KC2 179 aa11.16□□□□□ -0.62
SOCS6-201ENST00000397942 NECAP2Q9NVZ3 263 aa11.16□□□□□ -0.62
SOCS6-201ENST00000397942 DSPPQ9NZW4 1301 aa11.16□□□□□ -0.62
SOCS6-201ENST00000397942 PURGQ9UJV8 347 aaKnown RBP11.16□□□□□ -0.62
SOCS6-201ENST00000397942 LHX6Q9UPM6 363 aa11.16□□□□□ -0.62
SOCS6-201ENST00000397942 SLCO1B1Q9Y6L6 691 aa11.16□□□□□ -0.62
SOCS6-201ENST00000397942 ECI1P42126 302 aa11.16□□□□□ -0.62
SOCS6-201ENST00000397942 PDLIM3Q53GG5 364 aaPredicted RBP11.16□□□□□ -0.62
SOCS6-201ENST00000397942 TDHQ8IZJ6 230 aa11.16□□□□□ -0.62
SOCS6-201ENST00000397942 SFT2D1Q8WV19 159 aa11.16□□□□□ -0.62
SOCS6-201ENST00000397942 DUSP13Q9UII6 198 aa11.16□□□□□ -0.62
SOCS6-201ENST00000397942 FOXJ3Q9UPW0 622 aa11.16□□□□□ -0.62
SOCS6-201ENST00000397942 ARPC4-TTLL3A0A0A6YYG9 625 aa11.16□□□□□ -0.62
SOCS6-201ENST00000397942 IGHV3-64DA0A0J9YX35 117 aa11.16□□□□□ -0.62
SOCS6-201ENST00000397942 A0A1W2PQF6 199 aa11.16□□□□□ -0.62
SOCS6-201ENST00000397942 ADRB1P08588 477 aa11.16□□□□□ -0.62
SOCS6-201ENST00000397942 FCGR2CP31995 323 aa11.16□□□□□ -0.62
SOCS6-201ENST00000397942 GPR3P46089 330 aa11.16□□□□□ -0.62
SOCS6-201ENST00000397942 NKX6-1P78426 367 aaPredicted RBP11.16□□□□□ -0.62
SOCS6-201ENST00000397942 LTC4SQ16873 150 aa11.16□□□□□ -0.62
SOCS6-201ENST00000397942 TSEN54Q7Z6J9 526 aaKnown RBP11.16□□□□□ -0.62
SOCS6-201ENST00000397942 DTWD2Q8NBA8 298 aa11.16□□□□□ -0.62
SOCS6-201ENST00000397942 SMCO4Q9NRQ5 59 aa11.16□□□□□ -0.62
SOCS6-201ENST00000397942 LSM2Q9Y333 95 aaKnown RBP11.16□□□□□ -0.62
SOCS6-201ENST00000397942 KIF13BQ9NQT8 1826 aa11.16□□□□□ -0.62
SOCS6-201ENST00000397942 MPZL1O95297 269 aa11.16□□□□□ -0.62
SOCS6-201ENST00000397942 NRASP01111 189 aa11.16□□□□□ -0.62
SOCS6-201ENST00000397942 ACSM4P0C7M7 580 aa11.16□□□□□ -0.62
SOCS6-201ENST00000397942 RPL12P30050 165 aaKnown RBP11.16□□□□□ -0.62
SOCS6-201ENST00000397942 CATR1Q13166 79 aa11.16□□□□□ -0.62
SOCS6-201ENST00000397942 LRRTM1Q86UE6 522 aa11.16□□□□□ -0.62
SOCS6-201ENST00000397942 CDH26Q8IXH8 852 aa11.16□□□□□ -0.62
SOCS6-201ENST00000397942 APH1AQ96BI3 265 aa11.16□□□□□ -0.62
SOCS6-201ENST00000397942 C10orf90Q96M02 699 aa11.16□□□□□ -0.62
SOCS6-201ENST00000397942 NIPSNAP3BQ9BS92 247 aa11.16□□□□□ -0.62
SOCS6-201ENST00000397942 NXF2Q9GZY0 626 aaKnown RBP11.16□□□□□ -0.62
SOCS6-201ENST00000397942 TMEM100Q9NV29 134 aa11.16□□□□□ -0.62
SOCS6-201ENST00000397942 TIMM10BQ9Y5J6 103 aa11.16□□□□□ -0.62
SOCS6-201ENST00000397942 OR6C65A6NJZ3 312 aa11.15□□□□□ -0.62
SOCS6-201ENST00000397942 HBE1P02100 147 aa11.15□□□□□ -0.62
SOCS6-201ENST00000397942 LIMS1P48059 325 aa11.15□□□□□ -0.62
SOCS6-201ENST00000397942 SCMH1Q96GD3 660 aa11.15□□□□□ -0.62
SOCS6-201ENST00000397942 ZC3HAV1LQ96H79 300 aaKnown RBP11.15□□□□□ -0.62
SOCS6-201ENST00000397942 TSPAN32Q96QS1 320 aa11.15□□□□□ -0.62
SOCS6-201ENST00000397942 SLC25A32Q9H2D1 315 aa11.15□□□□□ -0.62
SOCS6-201ENST00000397942 PRMT8Q9NR22 394 aaPredicted RBP11.15□□□□□ -0.62
SOCS6-201ENST00000397942 FREM3P0C091 2139 aa11.15□□□□□ -0.62
SOCS6-201ENST00000397942 MYO7BQ6PIF6 2116 aa11.15□□□□□ -0.62
SOCS6-201ENST00000397942 RFPL4AA6NLU0 287 aa11.15□□□□□ -0.62
SOCS6-201ENST00000397942 RFPL4AL1F8VTS6 287 aa11.15□□□□□ -0.62
SOCS6-201ENST00000397942 HBG1P69891 147 aa11.15□□□□□ -0.62
SOCS6-201ENST00000397942 HBG2P69892 147 aa11.15□□□□□ -0.62
SOCS6-201ENST00000397942 ISXQ2M1V0 245 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms