RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 CFL1P23528 166 aaKnown RBP20.26■□□□□ 0.83
TSPAN4-203ENST00000397397 APOBEC3AP31941 199 aaPredicted RBP20.26■□□□□ 0.83
TSPAN4-203ENST00000397397 PRSS12P56730 875 aa20.26■□□□□ 0.83
TSPAN4-203ENST00000397397 ADIPOQQ15848 244 aa20.26■□□□□ 0.83
TSPAN4-203ENST00000397397 MBNL2Q5VZF2 373 aaKnown RBP20.26■□□□□ 0.83
TSPAN4-203ENST00000397397 DMKNQ6E0U4 476 aaPredicted RBP20.26■□□□□ 0.83
TSPAN4-203ENST00000397397 RDH10Q8IZV5 341 aa20.26■□□□□ 0.83
TSPAN4-203ENST00000397397 OR5AK2Q8NH90 309 aa20.26■□□□□ 0.83
TSPAN4-203ENST00000397397 FBXW5Q969U6 566 aa20.26■□□□□ 0.83
TSPAN4-203ENST00000397397 MRPL24Q96A35 216 aaKnown RBP20.26■□□□□ 0.83
TSPAN4-203ENST00000397397 REPIN1Q9BWE0 567 aaKnown RBP20.26■□□□□ 0.83
TSPAN4-203ENST00000397397 COMMD4Q9H0A8 199 aa20.26■□□□□ 0.83
TSPAN4-203ENST00000397397 OPA3Q9H6K4 179 aa20.26■□□□□ 0.83
TSPAN4-203ENST00000397397 UBTD1Q9HAC8 227 aa20.26■□□□□ 0.83
TSPAN4-203ENST00000397397 VCX3AQ9NNX9 186 aa20.26■□□□□ 0.83
TSPAN4-203ENST00000397397 DUSP13Q9UII6 198 aa20.26■□□□□ 0.83
TSPAN4-203ENST00000397397 ZNF391Q9UJN7 358 aa20.26■□□□□ 0.83
TSPAN4-203ENST00000397397 ABCA4P78363 2273 aa20.25■□□□□ 0.83
TSPAN4-203ENST00000397397 CLPTM1O96005 669 aa20.25■□□□□ 0.83
TSPAN4-203ENST00000397397 SMIM18P0DKX4 95 aa20.25■□□□□ 0.83
TSPAN4-203ENST00000397397 RAC2P15153 192 aa20.25■□□□□ 0.83
TSPAN4-203ENST00000397397 CELP19835 753 aa20.25■□□□□ 0.83
TSPAN4-203ENST00000397397 PSMB9P28065 219 aa20.25■□□□□ 0.83
TSPAN4-203ENST00000397397 MLLT11Q13015 90 aaPredicted RBP20.25■□□□□ 0.83
TSPAN4-203ENST00000397397 LRP11Q86VZ4 500 aa20.25■□□□□ 0.83
TSPAN4-203ENST00000397397 RPS4Y2Q8TD47 263 aa20.25■□□□□ 0.83
TSPAN4-203ENST00000397397 SMIM19Q96E16 107 aa20.25■□□□□ 0.83
TSPAN4-203ENST00000397397 FAM71F1Q96KD3 344 aaPredicted RBP20.25■□□□□ 0.83
TSPAN4-203ENST00000397397 OPALINQ96PE5 141 aa20.25■□□□□ 0.83
TSPAN4-203ENST00000397397 PDCD1LG2Q9BQ51 273 aa20.25■□□□□ 0.83
TSPAN4-203ENST00000397397 SYT3Q9BQG1 590 aa20.25■□□□□ 0.83
TSPAN4-203ENST00000397397 SOX7Q9BT81 388 aa20.25■□□□□ 0.83
TSPAN4-203ENST00000397397 MRPL37Q9BZE1 423 aaKnown RBP20.25■□□□□ 0.83
TSPAN4-203ENST00000397397 A0A1B0GTI1 187 aa20.24■□□□□ 0.83
TSPAN4-203ENST00000397397 A0A1B0GVI7 797 aa20.24■□□□□ 0.83
TSPAN4-203ENST00000397397 TRIM64CA6NLI5 447 aa20.24■□□□□ 0.83
TSPAN4-203ENST00000397397 H3BSH0 61 aa20.24■□□□□ 0.83
TSPAN4-203ENST00000397397 INMTO95050 263 aa20.24■□□□□ 0.83
TSPAN4-203ENST00000397397 ZFPL1O95159 310 aa20.24■□□□□ 0.83
TSPAN4-203ENST00000397397 IGLV3-1P01715 115 aa20.24■□□□□ 0.83
TSPAN4-203ENST00000397397 SERPINF1P36955 418 aa20.24■□□□□ 0.83
TSPAN4-203ENST00000397397 KLF3P57682 345 aaPredicted RBP20.24■□□□□ 0.83
TSPAN4-203ENST00000397397 SELENOVP59797 346 aa20.24■□□□□ 0.83
TSPAN4-203ENST00000397397 FAM3AP98173 230 aa20.24■□□□□ 0.83
TSPAN4-203ENST00000397397 PSG7Q13046 419 aa20.24■□□□□ 0.83
TSPAN4-203ENST00000397397 TMEM244Q5VVB8 128 aa20.24■□□□□ 0.83
TSPAN4-203ENST00000397397 UFD1Q92890 307 aa20.24■□□□□ 0.83
TSPAN4-203ENST00000397397 HAVCR1Q96D42 359 aa20.24■□□□□ 0.83
TSPAN4-203ENST00000397397 PLK3Q9H4B4 646 aa20.24■□□□□ 0.83
TSPAN4-203ENST00000397397 PLCE1Q9P212 2302 aa20.23■□□□□ 0.83
TSPAN4-203ENST00000397397 hCG_38984A0A1B0GV85 526 aa20.23■□□□□ 0.83
TSPAN4-203ENST00000397397 LOC107986453A0A1B0GWG9 222 aa20.23■□□□□ 0.83
TSPAN4-203ENST00000397397 GGT3PA6NGU5 568 aa20.23■□□□□ 0.83
TSPAN4-203ENST00000397397 SSTR2P30874 369 aa20.23■□□□□ 0.83
TSPAN4-203ENST00000397397 GSK3AP49840 483 aa20.23■□□□□ 0.83
TSPAN4-203ENST00000397397 ARMCX4Q5H9R4 360 aa20.23■□□□□ 0.83
TSPAN4-203ENST00000397397 OR2T2Q6IF00 324 aa20.23■□□□□ 0.83
TSPAN4-203ENST00000397397 FBXL14Q8N1E6 418 aa20.23■□□□□ 0.83
TSPAN4-203ENST00000397397 MRPS26Q9BYN8 205 aaKnown RBP20.23■□□□□ 0.83
TSPAN4-203ENST00000397397 SYT7O43581 403 aa20.22■□□□□ 0.83
TSPAN4-203ENST00000397397 PLPP2O43688 288 aa20.22■□□□□ 0.83
TSPAN4-203ENST00000397397 ISG15P05161 165 aa20.22■□□□□ 0.83
TSPAN4-203ENST00000397397 SELEP16581 610 aa20.22■□□□□ 0.83
TSPAN4-203ENST00000397397 ACHEP22303 614 aa20.22■□□□□ 0.83
TSPAN4-203ENST00000397397 TSTQ16762 297 aaKnown RBP20.22■□□□□ 0.83
TSPAN4-203ENST00000397397 LIPKQ5VXJ0 399 aa20.22■□□□□ 0.83
TSPAN4-203ENST00000397397 DOK3Q7L591 496 aa20.22■□□□□ 0.83
TSPAN4-203ENST00000397397 GHSRQ92847 366 aa20.22■□□□□ 0.83
TSPAN4-203ENST00000397397 MYEF2Q9P2K5 600 aaKnown RBP20.22■□□□□ 0.83
TSPAN4-203ENST00000397397 PURGQ9UJV8 347 aaKnown RBP20.22■□□□□ 0.83
TSPAN4-203ENST00000397397 IGLV3-9A0A075B6K5 115 aa20.21■□□□□ 0.83
TSPAN4-203ENST00000397397 A0A1W2PPW3 197 aa20.21■□□□□ 0.83
TSPAN4-203ENST00000397397 TIMM8AO60220 97 aaPredicted RBP20.21■□□□□ 0.83
TSPAN4-203ENST00000397397 MTRF1O75570 445 aaKnown RBP20.21■□□□□ 0.83
TSPAN4-203ENST00000397397 IGHV3-13P01766 116 aa20.21■□□□□ 0.83
TSPAN4-203ENST00000397397 PRF1P14222 555 aa20.21■□□□□ 0.83
TSPAN4-203ENST00000397397 CPEP16870 476 aa20.21■□□□□ 0.83
TSPAN4-203ENST00000397397 KITLGP21583 273 aa20.21■□□□□ 0.83
TSPAN4-203ENST00000397397 CCL1P22362 96 aa20.21■□□□□ 0.83
TSPAN4-203ENST00000397397 TTKP33981 857 aa20.21■□□□□ 0.83
TSPAN4-203ENST00000397397 TPBGQ13641 420 aa20.21■□□□□ 0.83
TSPAN4-203ENST00000397397 TMEM255AQ5JRV8 349 aa20.21■□□□□ 0.83
TSPAN4-203ENST00000397397 OR5AS1Q8N127 324 aa20.21■□□□□ 0.83
TSPAN4-203ENST00000397397 ZNF611Q8N823 705 aa20.21■□□□□ 0.83
TSPAN4-203ENST00000397397 MUL1Q969V5 352 aa20.21■□□□□ 0.83
TSPAN4-203ENST00000397397 PGLYRP3Q96LB9 341 aa20.21■□□□□ 0.83
TSPAN4-203ENST00000397397 PLEKHF2Q9H8W4 249 aa20.21■□□□□ 0.83
TSPAN4-203ENST00000397397 FAIMQ9NVQ4 179 aa20.21■□□□□ 0.83
TSPAN4-203ENST00000397397 TAAR3PQ9P1P4 343 aa20.21■□□□□ 0.83
TSPAN4-203ENST00000397397 HHLA2Q9UM44 414 aa20.21■□□□□ 0.83
TSPAN4-203ENST00000397397 ZNF281Q9Y2X9 895 aa20.21■□□□□ 0.83
TSPAN4-203ENST00000397397 ROS1P08922 2347 aa20.21■□□□□ 0.83
TSPAN4-203ENST00000397397 CRYBG3Q68DQ2 2970 aa20.21■□□□□ 0.83
TSPAN4-203ENST00000397397 CD300LBA8K4G0 201 aa20.2■□□□□ 0.82
TSPAN4-203ENST00000397397 DHRS3O75911 302 aa20.2■□□□□ 0.82
TSPAN4-203ENST00000397397 CD1AP06126 327 aa20.2■□□□□ 0.82
TSPAN4-203ENST00000397397 GPR50Q13585 617 aa20.2■□□□□ 0.82
TSPAN4-203ENST00000397397 ALKBH6Q3KRA9 238 aa20.2■□□□□ 0.82
TSPAN4-203ENST00000397397 SYT6Q5T7P8 510 aaPredicted RBP20.2■□□□□ 0.82
TSPAN4-203ENST00000397397 MUC15Q8N387 334 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms