RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 ARF6P62330 175 aa7.23□□□□□ -1.25
CAPN3-208ENST00000397204 OR8G1Q15617 311 aa7.23□□□□□ -1.25
CAPN3-208ENST00000397204 MEP1BQ16820 701 aa7.23□□□□□ -1.25
CAPN3-208ENST00000397204 SFRP4Q6FHJ7 346 aaPredicted RBP7.23□□□□□ -1.25
CAPN3-208ENST00000397204 PTCHD4Q6ZW05 846 aa7.23□□□□□ -1.25
CAPN3-208ENST00000397204 ARPINQ7Z6K5 226 aa7.23□□□□□ -1.25
CAPN3-208ENST00000397204 NAA40Q86UY6 237 aa7.23□□□□□ -1.25
CAPN3-208ENST00000397204 LDLRAD3Q86YD5 345 aa7.23□□□□□ -1.25
CAPN3-208ENST00000397204 OR6V1Q8N148 313 aa7.23□□□□□ -1.25
CAPN3-208ENST00000397204 C19orf18Q8NEA5 215 aa7.23□□□□□ -1.25
CAPN3-208ENST00000397204 SLC26A10Q8NG04 563 aa7.23□□□□□ -1.25
CAPN3-208ENST00000397204 OR2AJ1Q8NGZ0 328 aa7.23□□□□□ -1.25
CAPN3-208ENST00000397204 LRTOMTQ8WZ04 291 aa7.23□□□□□ -1.25
CAPN3-208ENST00000397204 LHX4Q969G2 390 aa7.23□□□□□ -1.25
CAPN3-208ENST00000397204 TSSK2Q96PF2 358 aa7.23□□□□□ -1.25
CAPN3-208ENST00000397204 TMEM120AQ9BXJ8 343 aa7.23□□□□□ -1.25
CAPN3-208ENST00000397204 MMADHCQ9H3L0 296 aaPredicted RBP7.23□□□□□ -1.25
CAPN3-208ENST00000397204 CNTD2Q9H8S5 307 aa7.23□□□□□ -1.25
CAPN3-208ENST00000397204 SAR1AQ9NR31 198 aa7.23□□□□□ -1.25
CAPN3-208ENST00000397204 CMTM6Q9NX76 183 aa7.23□□□□□ -1.25
CAPN3-208ENST00000397204 KAAG1Q9UBP8 84 aa7.23□□□□□ -1.25
CAPN3-208ENST00000397204 CTSZQ9UBR2 303 aa7.23□□□□□ -1.25
CAPN3-208ENST00000397204 CYB5R1Q9UHQ9 305 aa7.23□□□□□ -1.25
CAPN3-208ENST00000397204 AURKCQ9UQB9 309 aa7.23□□□□□ -1.25
CAPN3-208ENST00000397204 CAB39Q9Y376 341 aaPredicted RBP7.23□□□□□ -1.25
CAPN3-208ENST00000397204 FAM96BQ9Y3D0 163 aa7.23□□□□□ -1.25
CAPN3-208ENST00000397204 FAM32AQ9Y421 112 aaKnown RBP7.23□□□□□ -1.25
CAPN3-208ENST00000397204 U3KQE9 123 aa7.23□□□□□ -1.25
CAPN3-208ENST00000397204 A0A0U1RQK1 487 aa7.22□□□□□ -1.25
CAPN3-208ENST00000397204 C5orf63A6NC05 138 aa7.22□□□□□ -1.25
CAPN3-208ENST00000397204 OOEPA6NGQ2 149 aa7.22□□□□□ -1.25
CAPN3-208ENST00000397204 UNC119BA6NIH7 251 aa7.22□□□□□ -1.25
CAPN3-208ENST00000397204 DCTN6O00399 190 aa7.22□□□□□ -1.25
CAPN3-208ENST00000397204 ARPC3O15145 178 aa7.22□□□□□ -1.25
CAPN3-208ENST00000397204 IDH3BO43837 385 aa7.22□□□□□ -1.25
CAPN3-208ENST00000397204 TSPAN9O75954 239 aa7.22□□□□□ -1.25
CAPN3-208ENST00000397204 RENP00797 406 aa7.22□□□□□ -1.25
CAPN3-208ENST00000397204 LHBP01229 141 aa7.22□□□□□ -1.25
CAPN3-208ENST00000397204 H1F0P07305 194 aaKnown RBP7.22□□□□□ -1.25
CAPN3-208ENST00000397204 TGFBR2P37173 567 aa7.22□□□□□ -1.25
CAPN3-208ENST00000397204 OMPP47874 163 aa7.22□□□□□ -1.25
CAPN3-208ENST00000397204 LIPEQ05469 1076 aa7.22□□□□□ -1.25
CAPN3-208ENST00000397204 MZT1Q08AG7 82 aa7.22□□□□□ -1.25
CAPN3-208ENST00000397204 TRAP1Q12931 704 aaKnown RBP7.22□□□□□ -1.25
CAPN3-208ENST00000397204 OR8B8Q15620 311 aa7.22□□□□□ -1.25
CAPN3-208ENST00000397204 CDONQ4KMG0 1287 aa7.22□□□□□ -1.25
CAPN3-208ENST00000397204 PRAMEF6Q5VXH4 476 aa7.22□□□□□ -1.25
CAPN3-208ENST00000397204 SLC18B1Q6NT16 456 aa7.22□□□□□ -1.25
CAPN3-208ENST00000397204 SMARCD3Q6STE5 483 aa7.22□□□□□ -1.25
CAPN3-208ENST00000397204 Q6ZSV7 163 aa7.22□□□□□ -1.25
CAPN3-208ENST00000397204 BTN2A1Q7KYR7 527 aa7.22□□□□□ -1.25
CAPN3-208ENST00000397204 MRPL21Q7Z2W9 205 aaKnown RBP7.22□□□□□ -1.25
CAPN3-208ENST00000397204 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.22□□□□□ -1.25
CAPN3-208ENST00000397204 ZBTB46Q86UZ6 589 aa7.22□□□□□ -1.25
CAPN3-208ENST00000397204 SLC15A3Q8IY34 581 aa7.22□□□□□ -1.25
CAPN3-208ENST00000397204 BOLLQ8N9W6 283 aaKnown RBP7.22□□□□□ -1.25
CAPN3-208ENST00000397204 SCCPDHQ8NBX0 429 aa7.22□□□□□ -1.25
CAPN3-208ENST00000397204 SPTSSAQ969W0 71 aa7.22□□□□□ -1.25
CAPN3-208ENST00000397204 RSRC1Q96IZ7 334 aaKnown RBP7.22□□□□□ -1.25
CAPN3-208ENST00000397204 ERMAPQ96PL5 475 aaPredicted RBP7.22□□□□□ -1.25
CAPN3-208ENST00000397204 ATF6BQ99941 703 aa7.22□□□□□ -1.25
CAPN3-208ENST00000397204 HOPXQ9BPY8 73 aaPredicted RBP7.22□□□□□ -1.25
CAPN3-208ENST00000397204 KRCC1Q9NPI7 259 aaPredicted RBP7.22□□□□□ -1.25
CAPN3-208ENST00000397204 C14orf119Q9NWQ9 140 aa7.22□□□□□ -1.25
CAPN3-208ENST00000397204 MRPL15Q9P015 296 aaKnown RBP7.22□□□□□ -1.25
CAPN3-208ENST00000397204 KCNG2Q9UJ96 466 aa7.22□□□□□ -1.25
CAPN3-208ENST00000397204 KPTNQ9Y664 436 aa7.22□□□□□ -1.25
CAPN3-208ENST00000397204 A0A1B0GVI7 797 aa7.21□□□□□ -1.26
CAPN3-208ENST00000397204 M0R135 149 aa7.21□□□□□ -1.26
CAPN3-208ENST00000397204 NDUFAB1O14561 156 aa7.21□□□□□ -1.26
CAPN3-208ENST00000397204 DVL1O14640 695 aa7.21□□□□□ -1.26
CAPN3-208ENST00000397204 SLC22A2O15244 555 aa7.21□□□□□ -1.26
CAPN3-208ENST00000397204 SERPINA1P01009 418 aa7.21□□□□□ -1.26
CAPN3-208ENST00000397204 FBP1P09467 338 aa7.21□□□□□ -1.26
CAPN3-208ENST00000397204 TROVE2P10155 538 aaKnown RBP eCLIP7.21□□□□□ -1.26
CAPN3-208ENST00000397204 MUC1P15941 1255 aaPredicted RBP7.21□□□□□ -1.26
CAPN3-208ENST00000397204 RHCEP18577 417 aa7.21□□□□□ -1.26
CAPN3-208ENST00000397204 GGT2P36268 569 aa7.21□□□□□ -1.26
CAPN3-208ENST00000397204 DDOSTP39656 456 aa7.21□□□□□ -1.26
CAPN3-208ENST00000397204 FXYD6P3P58550 94 aa7.21□□□□□ -1.26
CAPN3-208ENST00000397204 C2orf68Q2NKX9 166 aa7.21□□□□□ -1.26
CAPN3-208ENST00000397204 RFX4Q33E94 735 aa7.21□□□□□ -1.26
CAPN3-208ENST00000397204 TEX36Q5VZQ5 186 aa7.21□□□□□ -1.26
CAPN3-208ENST00000397204 METAP1DQ6UB28 335 aaPredicted RBP7.21□□□□□ -1.26
CAPN3-208ENST00000397204 CFAP77Q6ZQR2 320 aa7.21□□□□□ -1.26
CAPN3-208ENST00000397204 HDXQ7Z353 690 aa7.21□□□□□ -1.26
CAPN3-208ENST00000397204 LINC00346Q8IVM7 164 aa7.21□□□□□ -1.26
CAPN3-208ENST00000397204 CMTM4Q8IZR5 234 aa7.21□□□□□ -1.26
CAPN3-208ENST00000397204 GALNT4Q8N4A0 578 aa7.21□□□□□ -1.26
CAPN3-208ENST00000397204 LY6G5BQ8NDX9 201 aa7.21□□□□□ -1.26
CAPN3-208ENST00000397204 RP9Q8TA86 221 aaKnown RBP7.21□□□□□ -1.26
CAPN3-208ENST00000397204 FAM110DQ8TAY7 271 aaPredicted RBP7.21□□□□□ -1.26
CAPN3-208ENST00000397204 ZNF799Q96GE5 643 aa7.21□□□□□ -1.26
CAPN3-208ENST00000397204 NMNAT3Q96T66 252 aa7.21□□□□□ -1.26
CAPN3-208ENST00000397204 RNPEPL1Q9HAU8 725 aa7.21□□□□□ -1.26
CAPN3-208ENST00000397204 SMURF1Q9HCE7 757 aa7.21□□□□□ -1.26
CAPN3-208ENST00000397204 C1orf123Q9NWV4 160 aa7.21□□□□□ -1.26
CAPN3-208ENST00000397204 NDUFAF4Q9P032 175 aa7.21□□□□□ -1.26
CAPN3-208ENST00000397204 RPUSD1Q9UJJ7 312 aaKnown RBP7.21□□□□□ -1.26
CAPN3-208ENST00000397204 ZNF816-ZNF321PA0A0X1KG74 233 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms