RNA–Protein interactions for RNA: ENST00000396268.7

CCHCR1-203, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,958 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-203ENST00000396268 PNLIPRP2P54317 469 aa12.5□□□□□ -0.41
CCHCR1-203ENST00000396268 SLC26A5P58743 744 aa12.5□□□□□ -0.41
CCHCR1-203ENST00000396268 AVPI1Q5T686 147 aa12.5□□□□□ -0.41
CCHCR1-203ENST00000396268 ZNF704Q6ZNC4 412 aaPredicted RBP12.5□□□□□ -0.41
CCHCR1-203ENST00000396268 SLC29A4Q7RTT9 530 aa12.5□□□□□ -0.41
CCHCR1-203ENST00000396268 OR52N4Q8NGI2 321 aa12.5□□□□□ -0.41
CCHCR1-203ENST00000396268 SMOC1Q9H4F8 434 aa12.5□□□□□ -0.41
CCHCR1-203ENST00000396268 MED29Q9NX70 200 aa12.5□□□□□ -0.41
CCHCR1-203ENST00000396268 NPIPA1Q9UND3 350 aa12.5□□□□□ -0.41
CCHCR1-203ENST00000396268 NUP210LQ5VU65 1888 aa12.49□□□□□ -0.41
CCHCR1-203ENST00000396268 C9orf170A2RU37 121 aa12.49□□□□□ -0.41
CCHCR1-203ENST00000396268 RAB27BO00194 218 aa12.49□□□□□ -0.41
CCHCR1-203ENST00000396268 LDLRAD4O15165 306 aa12.49□□□□□ -0.41
CCHCR1-203ENST00000396268 NDUFS6O75380 124 aaKnown RBP12.49□□□□□ -0.41
CCHCR1-203ENST00000396268 ARL4DP49703 201 aa12.49□□□□□ -0.41
CCHCR1-203ENST00000396268 ZNF345Q14585 488 aa12.49□□□□□ -0.41
CCHCR1-203ENST00000396268 ELAVL1Q15717 326 aaKnown RBP12.49□□□□□ -0.41
CCHCR1-203ENST00000396268 TMEM244Q5VVB8 128 aa12.49□□□□□ -0.41
CCHCR1-203ENST00000396268 SHISA6Q6ZSJ9 500 aa12.49□□□□□ -0.41
CCHCR1-203ENST00000396268 GRINAQ7Z429 371 aa12.49□□□□□ -0.41
CCHCR1-203ENST00000396268 SLC25A42Q86VD7 318 aa12.49□□□□□ -0.41
CCHCR1-203ENST00000396268 FOXRED2Q8IWF2 684 aa12.49□□□□□ -0.41
CCHCR1-203ENST00000396268 OIT3Q8WWZ8 545 aa12.49□□□□□ -0.41
CCHCR1-203ENST00000396268 WWTR1Q9GZV5 400 aa12.49□□□□□ -0.41
CCHCR1-203ENST00000396268 PTGES2Q9H7Z7 377 aa12.49□□□□□ -0.41
CCHCR1-203ENST00000396268 RAB22AQ9UL26 194 aa12.49□□□□□ -0.41
CCHCR1-203ENST00000396268 MMACHCQ9Y4U1 282 aa12.49□□□□□ -0.41
CCHCR1-203ENST00000396268 A0A0A6YYH2 397 aa12.49□□□□□ -0.41
CCHCR1-203ENST00000396268 LILRA5A6NI73 299 aa12.49□□□□□ -0.41
CCHCR1-203ENST00000396268 A6NJ64 397 aa12.49□□□□□ -0.41
CCHCR1-203ENST00000396268 SLC25A4P12235 298 aa12.49□□□□□ -0.41
CCHCR1-203ENST00000396268 FOXL2P58012 376 aa12.49□□□□□ -0.41
CCHCR1-203ENST00000396268 ZNF260Q3ZCT1 412 aa12.49□□□□□ -0.41
CCHCR1-203ENST00000396268 C1orf189Q5VU69 101 aa12.49□□□□□ -0.41
CCHCR1-203ENST00000396268 PMS2CLQ68D20 193 aa12.49□□□□□ -0.41
CCHCR1-203ENST00000396268 C16orf47Q6ZP98 133 aaPredicted RBP12.49□□□□□ -0.41
CCHCR1-203ENST00000396268 ADAD2Q8NCV1 583 aaKnown RBP12.49□□□□□ -0.41
CCHCR1-203ENST00000396268 BHLHE23Q8NDY6 225 aa12.49□□□□□ -0.41
CCHCR1-203ENST00000396268 DCUN1D4Q92564 292 aa12.49□□□□□ -0.41
CCHCR1-203ENST00000396268 CYYR1Q96J86 154 aa12.49□□□□□ -0.41
CCHCR1-203ENST00000396268 ZNF285Q96NJ3 590 aa12.49□□□□□ -0.41
CCHCR1-203ENST00000396268 SPACA5Q96QH8 159 aa12.49□□□□□ -0.41
CCHCR1-203ENST00000396268 NUDT22Q9BRQ3 303 aa12.49□□□□□ -0.41
CCHCR1-203ENST00000396268 RSRP1Q9BUV0 290 aa12.49□□□□□ -0.41
CCHCR1-203ENST00000396268 MYOZ1Q9NP98 299 aaPredicted RBP12.49□□□□□ -0.41
CCHCR1-203ENST00000396268 IGHV1OR21-1A0A087WYE8 117 aa12.48□□□□□ -0.41
CCHCR1-203ENST00000396268 IGKV1D-43A0A0B4J1Z2 117 aa12.48□□□□□ -0.41
CCHCR1-203ENST00000396268 WIPF3A6NGB9 483 aa12.48□□□□□ -0.41
CCHCR1-203ENST00000396268 TLCD2A6NGC4 264 aa12.48□□□□□ -0.41
CCHCR1-203ENST00000396268 TSPAN2O60636 221 aa12.48□□□□□ -0.41
CCHCR1-203ENST00000396268 NPIPB7O75200 414 aa12.48□□□□□ -0.41
CCHCR1-203ENST00000396268 PMP2P02689 132 aa12.48□□□□□ -0.41
CCHCR1-203ENST00000396268 ID4P47928 161 aa12.48□□□□□ -0.41
CCHCR1-203ENST00000396268 PPT1P50897 306 aa12.48□□□□□ -0.41
CCHCR1-203ENST00000396268 EFNA3P52797 238 aa12.48□□□□□ -0.41
CCHCR1-203ENST00000396268 POU3F1Q03052 451 aaPredicted RBP12.48□□□□□ -0.41
CCHCR1-203ENST00000396268 NKAIN3Q8N8D7 197 aa12.48□□□□□ -0.41
CCHCR1-203ENST00000396268 SLC26A10Q8NG04 563 aa12.48□□□□□ -0.41
CCHCR1-203ENST00000396268 OR13C9Q8NGT0 318 aa12.48□□□□□ -0.41
CCHCR1-203ENST00000396268 AQP3Q92482 292 aa12.48□□□□□ -0.41
CCHCR1-203ENST00000396268 DAZLQ92904 295 aaKnown RBP12.48□□□□□ -0.41
CCHCR1-203ENST00000396268 CNTNAP3BQ96NU0 1288 aa12.48□□□□□ -0.41
CCHCR1-203ENST00000396268 SULT2B1O00204 365 aa12.48□□□□□ -0.41
CCHCR1-203ENST00000396268 LAMTOR5O43504 91 aa12.48□□□□□ -0.41
CCHCR1-203ENST00000396268 NUDT21O43809 227 aaKnown RBP12.48□□□□□ -0.41
CCHCR1-203ENST00000396268 DCAF7P61962 342 aa12.48□□□□□ -0.41
CCHCR1-203ENST00000396268 NKAPLQ5M9Q1 402 aa12.48□□□□□ -0.41
CCHCR1-203ENST00000396268 C1orf100Q5SVJ3 147 aa12.48□□□□□ -0.41
CCHCR1-203ENST00000396268 RTN4RL2Q86UN3 420 aa12.48□□□□□ -0.41
CCHCR1-203ENST00000396268 ZNF101Q8IZC7 436 aa12.48□□□□□ -0.41
CCHCR1-203ENST00000396268 ARMC10Q8N2F6 343 aa12.48□□□□□ -0.41
CCHCR1-203ENST00000396268 TMEM105Q8N8V8 129 aa12.48□□□□□ -0.41
CCHCR1-203ENST00000396268 OR4A4PQ8NGN8 299 aa12.48□□□□□ -0.41
CCHCR1-203ENST00000396268 THAP3Q8WTV1 239 aaPredicted RBP12.48□□□□□ -0.41
CCHCR1-203ENST00000396268 FOXRED1Q96CU9 486 aaPredicted RBP12.48□□□□□ -0.41
CCHCR1-203ENST00000396268 ARL5BQ96KC2 179 aa12.48□□□□□ -0.41
CCHCR1-203ENST00000396268 C5orf34Q96MH7 638 aa12.48□□□□□ -0.41
CCHCR1-203ENST00000396268 EMC6Q9BV81 110 aa12.48□□□□□ -0.41
CCHCR1-203ENST00000396268 KCNK7Q9Y2U2 307 aa12.48□□□□□ -0.41
CCHCR1-203ENST00000396268 ZNF208O43345 1280 aa12.48□□□□□ -0.41
CCHCR1-203ENST00000396268 SYT7O43581 403 aa12.48□□□□□ -0.41
CCHCR1-203ENST00000396268 CFIP05156 583 aa12.48□□□□□ -0.41
CCHCR1-203ENST00000396268 AIMP2Q13155 320 aaKnown RBP12.48□□□□□ -0.41
CCHCR1-203ENST00000396268 UNC119Q13432 240 aa12.48□□□□□ -0.41
CCHCR1-203ENST00000396268 DNM1P34Q6PK57 102 aa12.48□□□□□ -0.41
CCHCR1-203ENST00000396268 COX15Q7KZN9 410 aa12.48□□□□□ -0.41
CCHCR1-203ENST00000396268 COMMD2Q86X83 199 aa12.48□□□□□ -0.41
CCHCR1-203ENST00000396268 ST7LQ8TDW4 575 aa12.48□□□□□ -0.41
CCHCR1-203ENST00000396268 MITD1Q8WV92 249 aa12.48□□□□□ -0.41
CCHCR1-203ENST00000396268 MRGPRFQ96AM1 343 aa12.48□□□□□ -0.41
CCHCR1-203ENST00000396268 ZFP57Q9NU63 452 aa12.48□□□□□ -0.41
CCHCR1-203ENST00000396268 VDAC3Q9Y277 283 aa12.48□□□□□ -0.41
CCHCR1-203ENST00000396268 SRSF10O75494 262 aaKnown RBP12.47□□□□□ -0.41
CCHCR1-203ENST00000396268 S100A6P06703 90 aa12.47□□□□□ -0.41
CCHCR1-203ENST00000396268 DAOP14920 347 aa12.47□□□□□ -0.41
CCHCR1-203ENST00000396268 INPP5JQ15735 1006 aaPredicted RBP12.47□□□□□ -0.41
CCHCR1-203ENST00000396268 AWAT2Q6E213 333 aa12.47□□□□□ -0.41
CCHCR1-203ENST00000396268 KLHL24Q6TFL4 600 aa12.47□□□□□ -0.41
CCHCR1-203ENST00000396268 PAQR4Q8N4S7 273 aaPredicted RBP12.47□□□□□ -0.41
CCHCR1-203ENST00000396268 OR10H5Q8NGA6 315 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms