RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 ZNF322Q6U7Q0 402 aaPredicted RBP14.08□□□□□ -0.16
CXCL1-201ENST00000395761 SSX6Q7RTT6 188 aa14.08□□□□□ -0.16
CXCL1-201ENST00000395761 KRT77Q7Z794 578 aa14.08□□□□□ -0.16
CXCL1-201ENST00000395761 EGFL6Q8IUX8 553 aa14.08□□□□□ -0.16
CXCL1-201ENST00000395761 MAPK1IP1LQ8NDC0 245 aa14.08□□□□□ -0.16
CXCL1-201ENST00000395761 ASB17Q8WXJ9 295 aa14.08□□□□□ -0.16
CXCL1-201ENST00000395761 MYDGFQ969H8 173 aa14.08□□□□□ -0.16
CXCL1-201ENST00000395761 SGK3Q96BR1 496 aa14.08□□□□□ -0.16
CXCL1-201ENST00000395761 TMEM80Q96HE8 168 aa14.08□□□□□ -0.16
CXCL1-201ENST00000395761 OR8B4Q96RC9 309 aa14.08□□□□□ -0.16
CXCL1-201ENST00000395761 SIGLEC11Q96RL6 698 aa14.08□□□□□ -0.16
CXCL1-201ENST00000395761 TBX5Q99593 518 aa14.08□□□□□ -0.16
CXCL1-201ENST00000395761 INPP5EQ9NRR6 644 aa14.08□□□□□ -0.16
CXCL1-201ENST00000395761 CYSLTR2Q9NS75 346 aa14.08□□□□□ -0.16
CXCL1-201ENST00000395761 NKIRAS2Q9NYR9 191 aa14.08□□□□□ -0.16
CXCL1-201ENST00000395761 DIMT1Q9UNQ2 313 aaKnown RBP14.08□□□□□ -0.16
CXCL1-201ENST00000395761 MYRFQ9Y2G1 1151 aa14.08□□□□□ -0.16
CXCL1-201ENST00000395761 A0A1W2PQL4 384 aaPredicted RBP14.07□□□□□ -0.16
CXCL1-201ENST00000395761 PTGES3LE9PB15 166 aa14.07□□□□□ -0.16
CXCL1-201ENST00000395761 APOC1P02654 83 aa14.07□□□□□ -0.16
CXCL1-201ENST00000395761 CDK1P06493 297 aa14.07□□□□□ -0.16
CXCL1-201ENST00000395761 GABARAPL2P60520 117 aa14.07□□□□□ -0.16
CXCL1-201ENST00000395761 ACTC1P68032 377 aa14.07□□□□□ -0.16
CXCL1-201ENST00000395761 ACTA1P68133 377 aa14.07□□□□□ -0.16
CXCL1-201ENST00000395761 KCTD21Q4G0X4 260 aa14.07□□□□□ -0.16
CXCL1-201ENST00000395761 PGAP1Q75T13 922 aa14.07□□□□□ -0.16
CXCL1-201ENST00000395761 MRPL21Q7Z2W9 205 aaKnown RBP14.07□□□□□ -0.16
CXCL1-201ENST00000395761 ZNF679Q8IYX0 411 aa14.07□□□□□ -0.16
CXCL1-201ENST00000395761 ACBD7Q8N6N7 88 aa14.07□□□□□ -0.16
CXCL1-201ENST00000395761 BHLHE23Q8NDY6 225 aa14.07□□□□□ -0.16
CXCL1-201ENST00000395761 OR8G5Q8NG78 346 aa14.07□□□□□ -0.16
CXCL1-201ENST00000395761 YIPF5Q969M3 257 aa14.07□□□□□ -0.16
CXCL1-201ENST00000395761 REPIN1Q9BWE0 567 aaKnown RBP14.07□□□□□ -0.16
CXCL1-201ENST00000395761 REG4Q9BYZ8 158 aa14.07□□□□□ -0.16
CXCL1-201ENST00000395761 PAK1IP1Q9NWT1 392 aaPredicted RBP14.07□□□□□ -0.16
CXCL1-201ENST00000395761 CGGBP1Q9UFW8 167 aaPredicted RBP14.07□□□□□ -0.16
CXCL1-201ENST00000395761 A0A096LNT2 108 aa14.06□□□□□ -0.16
CXCL1-201ENST00000395761 LOC390937A0A1W2PQ73 354 aa14.06□□□□□ -0.16
CXCL1-201ENST00000395761 IQCF6A8MYZ5 107 aa14.06□□□□□ -0.16
CXCL1-201ENST00000395761 ZNF670-ZNF695F2Z2N8 137 aa14.06□□□□□ -0.16
CXCL1-201ENST00000395761 PHYHO14832 338 aa14.06□□□□□ -0.16
CXCL1-201ENST00000395761 CDC14BO60729 498 aa14.06□□□□□ -0.16
CXCL1-201ENST00000395761 ADH4P08319 380 aa14.06□□□□□ -0.16
CXCL1-201ENST00000395761 CSF3P09919 207 aa14.06□□□□□ -0.16
CXCL1-201ENST00000395761 HNRNPA0Q13151 305 aaKnown RBP14.06□□□□□ -0.16
CXCL1-201ENST00000395761 DEGS2Q6QHC5 323 aa14.06□□□□□ -0.16
CXCL1-201ENST00000395761 AHSA2Q719I0 299 aa14.06□□□□□ -0.16
CXCL1-201ENST00000395761 STX19Q8N4C7 294 aa14.06□□□□□ -0.16
CXCL1-201ENST00000395761 OR2Z1Q8NG97 314 aa14.06□□□□□ -0.16
CXCL1-201ENST00000395761 OR10H4Q8NGA5 316 aa14.06□□□□□ -0.16
CXCL1-201ENST00000395761 RDH5Q92781 318 aa14.06□□□□□ -0.16
CXCL1-201ENST00000395761 SPSB4Q96A44 273 aa14.06□□□□□ -0.16
CXCL1-201ENST00000395761 PGAM5Q96HS1 289 aa14.06□□□□□ -0.16
CXCL1-201ENST00000395761 C18orf12Q96KH6 178 aa14.06□□□□□ -0.16
CXCL1-201ENST00000395761 COX4I2Q96KJ9 171 aa14.06□□□□□ -0.16
CXCL1-201ENST00000395761 SMR3AQ99954 134 aa14.06□□□□□ -0.16
CXCL1-201ENST00000395761 ZNF649Q9BS31 505 aa14.06□□□□□ -0.16
CXCL1-201ENST00000395761 CDCA4Q9BXL8 241 aa14.06□□□□□ -0.16
CXCL1-201ENST00000395761 MROQ9BYG7 248 aa14.06□□□□□ -0.16
CXCL1-201ENST00000395761 NIPAL2Q9H841 368 aa14.06□□□□□ -0.16
CXCL1-201ENST00000395761 MYOZ1Q9NP98 299 aaPredicted RBP14.06□□□□□ -0.16
CXCL1-201ENST00000395761 DECR2Q9NUI1 292 aa14.06□□□□□ -0.16
CXCL1-201ENST00000395761 MRM2Q9UI43 246 aaKnown RBP14.06□□□□□ -0.16
CXCL1-201ENST00000395761 IKZF2Q9UKS7 526 aa14.06□□□□□ -0.16
CXCL1-201ENST00000395761 ZDHHC8Q9ULC8 765 aa14.06□□□□□ -0.16
CXCL1-201ENST00000395761 CACNG2Q9Y698 323 aa14.06□□□□□ -0.16
CXCL1-201ENST00000395761 TEP1Q99973 2627 aaKnown RBP14.06□□□□□ -0.16
CXCL1-201ENST00000395761 CD300LBA8K4G0 201 aa14.05□□□□□ -0.16
CXCL1-201ENST00000395761 VWC2LB2RUY7 222 aa14.05□□□□□ -0.16
CXCL1-201ENST00000395761 H0YL77 283 aa14.05□□□□□ -0.16
CXCL1-201ENST00000395761 TPD52L2O43399 206 aaKnown RBP14.05□□□□□ -0.16
CXCL1-201ENST00000395761 ZNF254O75437 659 aa14.05□□□□□ -0.16
CXCL1-201ENST00000395761 TNFAIP8O95379 198 aa14.05□□□□□ -0.16
CXCL1-201ENST00000395761 INHBBP09529 407 aa14.05□□□□□ -0.16
CXCL1-201ENST00000395761 SELEP16581 610 aa14.05□□□□□ -0.16
CXCL1-201ENST00000395761 RBMXP38159 391 aaKnown RBP14.05□□□□□ -0.16
CXCL1-201ENST00000395761 PSMA6P60900 246 aaKnown RBP14.05□□□□□ -0.16
CXCL1-201ENST00000395761 GALEQ14376 348 aa14.05□□□□□ -0.16
CXCL1-201ENST00000395761 GFOD2Q3B7J2 385 aa14.05□□□□□ -0.16
CXCL1-201ENST00000395761 ZMAT1Q5H9K5 638 aa14.05□□□□□ -0.16
CXCL1-201ENST00000395761 FAM209AQ5JX71 171 aa14.05□□□□□ -0.16
CXCL1-201ENST00000395761 PLEKHG7Q6ZR37 379 aa14.05□□□□□ -0.16
CXCL1-201ENST00000395761 PRSS48Q7RTY5 328 aa14.05□□□□□ -0.16
CXCL1-201ENST00000395761 SPRYD4Q8WW59 207 aaPredicted RBP14.05□□□□□ -0.16
CXCL1-201ENST00000395761 PPP1R14AQ96A00 147 aa14.05□□□□□ -0.16
CXCL1-201ENST00000395761 REEP6Q96HR9 211 aa14.05□□□□□ -0.16
CXCL1-201ENST00000395761 MYCBPQ99417 103 aaPredicted RBP14.05□□□□□ -0.16
CXCL1-201ENST00000395761 SLC30A2Q9BRI3 323 aa14.05□□□□□ -0.16
CXCL1-201ENST00000395761 OR10A2Q9H208 303 aa14.05□□□□□ -0.16
CXCL1-201ENST00000395761 ZNF696Q9H7X3 374 aa14.05□□□□□ -0.16
CXCL1-201ENST00000395761 SP140LQ9H930 580 aa14.05□□□□□ -0.16
CXCL1-201ENST00000395761 FAM206AQ9NX38 181 aa14.05□□□□□ -0.16
CXCL1-201ENST00000395761 ERVK-18Q9QC07 812 aa14.05□□□□□ -0.16
CXCL1-201ENST00000395761 EXOSC1Q9Y3B2 195 aaKnown RBP14.05□□□□□ -0.16
CXCL1-201ENST00000395761 TMEM269A0A1B0GVZ9 245 aa14.04□□□□□ -0.16
CXCL1-201ENST00000395761 DAPL1A0PJW8 107 aa14.04□□□□□ -0.16
CXCL1-201ENST00000395761 GGT3PA6NGU5 568 aa14.04□□□□□ -0.16
CXCL1-201ENST00000395761 NDUFS8O00217 210 aa14.04□□□□□ -0.16
CXCL1-201ENST00000395761 MLNRO43193 412 aa14.04□□□□□ -0.16
CXCL1-201ENST00000395761 XRCC2O43543 280 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms