RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 PFDN2Q9UHV9 154 aa11.92□□□□□ -0.5
GTF2F1-201ENST00000394456 C9orf170A2RU37 121 aa11.92□□□□□ -0.5
GTF2F1-201ENST00000394456 MPTX1A8MV57 137 aa11.92□□□□□ -0.5
GTF2F1-201ENST00000394456 AQP8O94778 261 aa11.92□□□□□ -0.5
GTF2F1-201ENST00000394456 MPIG6BO95866 241 aa11.92□□□□□ -0.5
GTF2F1-201ENST00000394456 UBCP0CG48 685 aaKnown RBP11.92□□□□□ -0.5
GTF2F1-201ENST00000394456 CALCRP30988 508 aa11.92□□□□□ -0.5
GTF2F1-201ENST00000394456 P2RY4P51582 365 aa11.92□□□□□ -0.5
GTF2F1-201ENST00000394456 AKR1C2P52895 323 aa11.92□□□□□ -0.5
GTF2F1-201ENST00000394456 ZNF121P58317 390 aaPredicted RBP11.92□□□□□ -0.5
GTF2F1-201ENST00000394456 GMFBP60983 142 aa11.92□□□□□ -0.5
GTF2F1-201ENST00000394456 AKR1C1Q04828 323 aa11.92□□□□□ -0.5
GTF2F1-201ENST00000394456 GLIPR1L1Q6UWM5 242 aa11.92□□□□□ -0.5
GTF2F1-201ENST00000394456 PDZD9Q8IXQ8 264 aa11.92□□□□□ -0.5
GTF2F1-201ENST00000394456 ST8SIA1Q92185 356 aa11.92□□□□□ -0.5
GTF2F1-201ENST00000394456 MYOTQ9UBF9 498 aa11.92□□□□□ -0.5
GTF2F1-201ENST00000394456 UPB1Q9UBR1 384 aa11.92□□□□□ -0.5
GTF2F1-201ENST00000394456 RAB22AQ9UL26 194 aa11.92□□□□□ -0.5
GTF2F1-201ENST00000394456 IGHV3-15A0A0B4J1V0 119 aa11.91□□□□□ -0.5
GTF2F1-201ENST00000394456 C13orf42A0A1B0GVH6 325 aa11.91□□□□□ -0.5
GTF2F1-201ENST00000394456 MEGF11A6BM72 1044 aa11.91□□□□□ -0.5
GTF2F1-201ENST00000394456 TUBAL3A6NHL2 446 aa11.91□□□□□ -0.5
GTF2F1-201ENST00000394456 YKT6O15498 198 aa11.91□□□□□ -0.5
GTF2F1-201ENST00000394456 CER1O95813 267 aa11.91□□□□□ -0.5
GTF2F1-201ENST00000394456 MELTFP08582 738 aa11.91□□□□□ -0.5
GTF2F1-201ENST00000394456 LAP3P28838 519 aa11.91□□□□□ -0.5
GTF2F1-201ENST00000394456 APOBEC1P41238 236 aaKnown RBP11.91□□□□□ -0.5
GTF2F1-201ENST00000394456 RGS19P49795 217 aa11.91□□□□□ -0.5
GTF2F1-201ENST00000394456 PEAR1Q5VY43 1037 aaPredicted RBP11.91□□□□□ -0.5
GTF2F1-201ENST00000394456 MRPL14Q6P1L8 145 aaKnown RBP11.91□□□□□ -0.5
GTF2F1-201ENST00000394456 C1QL2Q7Z5L3 287 aa11.91□□□□□ -0.5
GTF2F1-201ENST00000394456 SLC51BQ86UW2 128 aa11.91□□□□□ -0.5
GTF2F1-201ENST00000394456 OR10K1Q8NGX5 313 aa11.91□□□□□ -0.5
GTF2F1-201ENST00000394456 WNT2BQ93097 391 aa11.91□□□□□ -0.5
GTF2F1-201ENST00000394456 DDIT4LQ96D03 193 aa11.91□□□□□ -0.5
GTF2F1-201ENST00000394456 C1orf147Q96MC9 270 aaPredicted RBP11.91□□□□□ -0.5
GTF2F1-201ENST00000394456 GPR84Q9NQS5 396 aa11.91□□□□□ -0.5
GTF2F1-201ENST00000394456 TNFSF18Q9UNG2 199 aa11.91□□□□□ -0.5
GTF2F1-201ENST00000394456 TRAF3IP2O43734 574 aaPredicted RBP11.91□□□□□ -0.5
GTF2F1-201ENST00000394456 APOC3P02656 99 aa11.91□□□□□ -0.5
GTF2F1-201ENST00000394456 ZNF93P35789 620 aaPredicted RBP11.91□□□□□ -0.5
GTF2F1-201ENST00000394456 TMEM50BP56557 158 aa11.91□□□□□ -0.5
GTF2F1-201ENST00000394456 CLRN1P58418 232 aa11.91□□□□□ -0.5
GTF2F1-201ENST00000394456 IL13RA1P78552 427 aa11.91□□□□□ -0.5
GTF2F1-201ENST00000394456 TOMM20Q15388 145 aa11.91□□□□□ -0.5
GTF2F1-201ENST00000394456 C11orf87Q6NUJ2 197 aa11.91□□□□□ -0.5
GTF2F1-201ENST00000394456 DNM1P34Q6PK57 102 aa11.91□□□□□ -0.5
GTF2F1-201ENST00000394456 KLHL24Q6TFL4 600 aa11.91□□□□□ -0.5
GTF2F1-201ENST00000394456 LYG2Q86SG7 212 aa11.91□□□□□ -0.5
GTF2F1-201ENST00000394456 SLC25A42Q86VD7 318 aa11.91□□□□□ -0.5
GTF2F1-201ENST00000394456 NAXDQ8IW45 347 aa11.91□□□□□ -0.5
GTF2F1-201ENST00000394456 TMEM105Q8N8V8 129 aa11.91□□□□□ -0.5
GTF2F1-201ENST00000394456 THRSPQ92748 146 aa11.91□□□□□ -0.5
GTF2F1-201ENST00000394456 MR1Q95460 341 aa11.91□□□□□ -0.5
GTF2F1-201ENST00000394456 ZNF471Q9BX82 626 aaPredicted RBP11.91□□□□□ -0.5
GTF2F1-201ENST00000394456 LPAR5Q9H1C0 372 aa11.91□□□□□ -0.5
GTF2F1-201ENST00000394456 PPA2Q9H2U2 334 aa11.91□□□□□ -0.5
GTF2F1-201ENST00000394456 METTL7AQ9H8H3 244 aa11.91□□□□□ -0.5
GTF2F1-201ENST00000394456 MBD2Q9UBB5 411 aa11.91□□□□□ -0.5
GTF2F1-201ENST00000394456 EFSO43281 561 aa11.9□□□□□ -0.5
GTF2F1-201ENST00000394456 ZFAND5O76080 213 aa11.9□□□□□ -0.5
GTF2F1-201ENST00000394456 CD8AP01732 235 aa11.9□□□□□ -0.5
GTF2F1-201ENST00000394456 PGA4P0DJD7 388 aa11.9□□□□□ -0.5
GTF2F1-201ENST00000394456 PGA3P0DJD8 388 aa11.9□□□□□ -0.5
GTF2F1-201ENST00000394456 FGF5P12034 268 aa11.9□□□□□ -0.5
GTF2F1-201ENST00000394456 DLSTP36957 453 aa11.9□□□□□ -0.5
GTF2F1-201ENST00000394456 NPY4RP50391 375 aa11.9□□□□□ -0.5
GTF2F1-201ENST00000394456 SSBP1Q04837 148 aaKnown RBP11.9□□□□□ -0.5
GTF2F1-201ENST00000394456 MICBQ29980 383 aa11.9□□□□□ -0.5
GTF2F1-201ENST00000394456 CCDC157Q569K6 752 aa11.9□□□□□ -0.5
GTF2F1-201ENST00000394456 FAM57BQ71RH2 274 aa11.9□□□□□ -0.5
GTF2F1-201ENST00000394456 SLC22A24Q8N4F4 322 aa11.9□□□□□ -0.5
GTF2F1-201ENST00000394456 OR5L2Q8NGL0 311 aa11.9□□□□□ -0.5
GTF2F1-201ENST00000394456 ZNF775Q96BV0 537 aaPredicted RBP11.9□□□□□ -0.5
GTF2F1-201ENST00000394456 IFT46Q9NQC8 304 aa11.9□□□□□ -0.5
GTF2F1-201ENST00000394456 IGKV1-9A0A0C4DH69 117 aa11.9□□□□□ -0.5
GTF2F1-201ENST00000394456 METTL21EPA6NDL7 271 aa11.9□□□□□ -0.5
GTF2F1-201ENST00000394456 DISC1C4P0D8 188 aa11.9□□□□□ -0.5
GTF2F1-201ENST00000394456 RAB3AP20336 220 aa11.9□□□□□ -0.5
GTF2F1-201ENST00000394456 HSD11B1P28845 292 aa11.9□□□□□ -0.5
GTF2F1-201ENST00000394456 TMEM176BQ3YBM2 270 aaPredicted RBP11.9□□□□□ -0.5
GTF2F1-201ENST00000394456 OVCH2Q7RTZ1 564 aa11.9□□□□□ -0.5
GTF2F1-201ENST00000394456 MISPQ8IVT2 679 aa11.9□□□□□ -0.5
GTF2F1-201ENST00000394456 AGBL5Q8NDL9 886 aa11.9□□□□□ -0.5
GTF2F1-201ENST00000394456 OR10R2Q8NGX6 335 aa11.9□□□□□ -0.5
GTF2F1-201ENST00000394456 SLC39A7Q92504 469 aa11.9□□□□□ -0.5
GTF2F1-201ENST00000394456 DEFB126Q9BYW3 111 aa11.9□□□□□ -0.5
GTF2F1-201ENST00000394456 BARX1Q9HBU1 254 aaPredicted RBP11.9□□□□□ -0.5
GTF2F1-201ENST00000394456 ALKBH4Q9NXW9 302 aa11.9□□□□□ -0.5
GTF2F1-201ENST00000394456 NCOA6Q14686 2063 aaPredicted RBP11.9□□□□□ -0.5
GTF2F1-201ENST00000394456 SDCBPO00560 298 aaPredicted RBP11.89□□□□□ -0.51
GTF2F1-201ENST00000394456 NTN3O00634 580 aaPredicted RBP11.89□□□□□ -0.51
GTF2F1-201ENST00000394456 ADAP1O75689 374 aa11.89□□□□□ -0.51
GTF2F1-201ENST00000394456 ZNF41P51814 821 aaPredicted RBP11.89□□□□□ -0.51
GTF2F1-201ENST00000394456 PHYHD1Q5SRE7 291 aa11.89□□□□□ -0.51
GTF2F1-201ENST00000394456 UEVLDQ8IX04 471 aa11.89□□□□□ -0.51
GTF2F1-201ENST00000394456 NKAIN3Q8N8D7 197 aa11.89□□□□□ -0.51
GTF2F1-201ENST00000394456 PXT1Q8NFP0 134 aa11.89□□□□□ -0.51
GTF2F1-201ENST00000394456 TMEM41AQ96HV5 264 aa11.89□□□□□ -0.51
GTF2F1-201ENST00000394456 SLC26A1Q9H2B4 701 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms