RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 STAG3L2P0CL84 134 aa3.34□□□□□ -1.87
RNU6-40P-201ENST00000384254 BMI1P35226 326 aa3.34□□□□□ -1.87
RNU6-40P-201ENST00000384254 NDUFA8P51970 172 aa3.34□□□□□ -1.87
RNU6-40P-201ENST00000384254 CACNG7P62955 275 aa3.34□□□□□ -1.87
RNU6-40P-201ENST00000384254 CYP24A1Q07973 514 aa3.34□□□□□ -1.87
RNU6-40P-201ENST00000384254 PPIDQ08752 370 aaKnown RBP3.34□□□□□ -1.87
RNU6-40P-201ENST00000384254 PIGHQ14442 188 aaPredicted RBP3.34□□□□□ -1.87
RNU6-40P-201ENST00000384254 LINC00483Q53H64 154 aa3.34□□□□□ -1.87
RNU6-40P-201ENST00000384254 TMEM205Q6UW68 189 aa3.34□□□□□ -1.87
RNU6-40P-201ENST00000384254 FBXO36Q8NEA4 188 aa3.34□□□□□ -1.87
RNU6-40P-201ENST00000384254 C19orf18Q8NEA5 215 aa3.34□□□□□ -1.87
RNU6-40P-201ENST00000384254 OR5AR1Q8NGP9 310 aa3.34□□□□□ -1.87
RNU6-40P-201ENST00000384254 LILRB4Q8NHJ6 448 aa3.34□□□□□ -1.87
RNU6-40P-201ENST00000384254 ZNF707Q96C28 371 aaPredicted RBP3.34□□□□□ -1.87
RNU6-40P-201ENST00000384254 RBMXL1Q96E39 390 aaKnown RBP3.34□□□□□ -1.87
RNU6-40P-201ENST00000384254 OR2AG1Q9H205 316 aa3.34□□□□□ -1.87
RNU6-40P-201ENST00000384254 CYTL1Q9NRR1 136 aa3.34□□□□□ -1.87
RNU6-40P-201ENST00000384254 COMMD3-BMI1R4GMX3 469 aa3.34□□□□□ -1.87
RNU6-40P-201ENST00000384254 NUP214P35658 2090 aaPredicted RBP3.34□□□□□ -1.88
RNU6-40P-201ENST00000384254 LOC100653049A0A140TA62 436 aa3.33□□□□□ -1.88
RNU6-40P-201ENST00000384254 A0A1B0GUH1 482 aa3.33□□□□□ -1.88
RNU6-40P-201ENST00000384254 NDUFC2-KCTD14E9PQ53 114 aa3.33□□□□□ -1.88
RNU6-40P-201ENST00000384254 EIF1BO60739 113 aaKnown RBP3.33□□□□□ -1.88
RNU6-40P-201ENST00000384254 KRT34O76011 436 aa3.33□□□□□ -1.88
RNU6-40P-201ENST00000384254 PTHP01270 115 aa3.33□□□□□ -1.88
RNU6-40P-201ENST00000384254 HLA-DQA1P01909 254 aa3.33□□□□□ -1.88
RNU6-40P-201ENST00000384254 NUP62P37198 522 aaPredicted RBP3.33□□□□□ -1.88
RNU6-40P-201ENST00000384254 EIF1P41567 113 aaKnown RBP3.33□□□□□ -1.88
RNU6-40P-201ENST00000384254 IFITM3Q01628 133 aa3.33□□□□□ -1.88
RNU6-40P-201ENST00000384254 NKAIN1Q4KMZ8 207 aa3.33□□□□□ -1.88
RNU6-40P-201ENST00000384254 C5orf47Q569G3 176 aa3.33□□□□□ -1.88
RNU6-40P-201ENST00000384254 ZNF684Q5T5D7 378 aa3.33□□□□□ -1.88
RNU6-40P-201ENST00000384254 SAXO2Q658L1 398 aa3.33□□□□□ -1.88
RNU6-40P-201ENST00000384254 THOC7Q6I9Y2 204 aaKnown RBP3.33□□□□□ -1.88
RNU6-40P-201ENST00000384254 OR2T5Q6IEZ7 315 aa3.33□□□□□ -1.88
RNU6-40P-201ENST00000384254 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.33□□□□□ -1.88
RNU6-40P-201ENST00000384254 SLC35D2Q76EJ3 337 aa3.33□□□□□ -1.88
RNU6-40P-201ENST00000384254 SLC16A13Q7RTY0 426 aa3.33□□□□□ -1.88
RNU6-40P-201ENST00000384254 RAB43Q86YS6 212 aa3.33□□□□□ -1.88
RNU6-40P-201ENST00000384254 OR1J4Q8NGS1 313 aa3.33□□□□□ -1.88
RNU6-40P-201ENST00000384254 OR9A2Q8NGT5 310 aa3.33□□□□□ -1.88
RNU6-40P-201ENST00000384254 OR2T29Q8NH02 315 aa3.33□□□□□ -1.88
RNU6-40P-201ENST00000384254 TCP10LQ8TDR4 215 aa3.33□□□□□ -1.88
RNU6-40P-201ENST00000384254 L3HYPDHQ96EM0 354 aa3.33□□□□□ -1.88
RNU6-40P-201ENST00000384254 TBL1YQ9BQ87 522 aa3.33□□□□□ -1.88
RNU6-40P-201ENST00000384254 AGMATQ9BSE5 352 aa3.33□□□□□ -1.88
RNU6-40P-201ENST00000384254 FBXO44Q9H4M3 255 aa3.33□□□□□ -1.88
RNU6-40P-201ENST00000384254 ARMC7Q9H6L4 198 aa3.33□□□□□ -1.88
RNU6-40P-201ENST00000384254 REEP1Q9H902 201 aa3.33□□□□□ -1.88
RNU6-40P-201ENST00000384254 SLC38A10Q9HBR0 1119 aa3.33□□□□□ -1.88
RNU6-40P-201ENST00000384254 PCDH11XQ9BZA7 1347 aa3.33□□□□□ -1.88
RNU6-40P-201ENST00000384254 IGKV1-8A0A0C4DH67 115 aa3.32□□□□□ -1.88
RNU6-40P-201ENST00000384254 A0A0J9YYE9 177 aa3.32□□□□□ -1.88
RNU6-40P-201ENST00000384254 RSPH10B2B2RC85 870 aa3.32□□□□□ -1.88
RNU6-40P-201ENST00000384254 KRBOX1C9JBD0 128 aa3.32□□□□□ -1.88
RNU6-40P-201ENST00000384254 TAAR5O14804 337 aa3.32□□□□□ -1.88
RNU6-40P-201ENST00000384254 SNAI1O95863 264 aaPredicted RBP3.32□□□□□ -1.88
RNU6-40P-201ENST00000384254 PAHP00439 452 aa3.32□□□□□ -1.88
RNU6-40P-201ENST00000384254 TRBC1P01850 177 aa3.32□□□□□ -1.88
RNU6-40P-201ENST00000384254 KLK1P06870 262 aa3.32□□□□□ -1.88
RNU6-40P-201ENST00000384254 RSPH10BP0C881 870 aa3.32□□□□□ -1.88
RNU6-40P-201ENST00000384254 GABRG2P18507 467 aa3.32□□□□□ -1.88
RNU6-40P-201ENST00000384254 PCK1P35558 622 aa3.32□□□□□ -1.88
RNU6-40P-201ENST00000384254 GGT2P36268 569 aa3.32□□□□□ -1.88
RNU6-40P-201ENST00000384254 GFERP55789 205 aa3.32□□□□□ -1.88
RNU6-40P-201ENST00000384254 TAS2R31P59538 309 aa3.32□□□□□ -1.88
RNU6-40P-201ENST00000384254 OR2B8PP59922 312 aa3.32□□□□□ -1.88
RNU6-40P-201ENST00000384254 NAB1Q13506 487 aa3.32□□□□□ -1.88
RNU6-40P-201ENST00000384254 EIF4EBP2Q13542 120 aaPredicted RBP3.32□□□□□ -1.88
RNU6-40P-201ENST00000384254 NDUFAF7Q7L592 441 aa3.32□□□□□ -1.88
RNU6-40P-201ENST00000384254 BHLHA15Q7RTS1 189 aaPredicted RBP3.32□□□□□ -1.88
RNU6-40P-201ENST00000384254 OR2W3Q7Z3T1 314 aa3.32□□□□□ -1.88
RNU6-40P-201ENST00000384254 MDP1Q86V88 176 aa3.32□□□□□ -1.88
RNU6-40P-201ENST00000384254 ZNF695Q8IW36 515 aa3.32□□□□□ -1.88
RNU6-40P-201ENST00000384254 SLC30A8Q8IWU4 369 aa3.32□□□□□ -1.88
RNU6-40P-201ENST00000384254 TMEM256Q8N2U0 113 aa3.32□□□□□ -1.88
RNU6-40P-201ENST00000384254 ARHGAP18Q8N392 663 aa3.32□□□□□ -1.88
RNU6-40P-201ENST00000384254 OR51L1Q8NGJ5 315 aa3.32□□□□□ -1.88
RNU6-40P-201ENST00000384254 OR6K6Q8NGW6 343 aa3.32□□□□□ -1.88
RNU6-40P-201ENST00000384254 OR6N1Q8NGY5 312 aa3.32□□□□□ -1.88
RNU6-40P-201ENST00000384254 MITD1Q8WV92 249 aa3.32□□□□□ -1.88
RNU6-40P-201ENST00000384254 TMEM243Q9BU79 118 aa3.32□□□□□ -1.88
RNU6-40P-201ENST00000384254 PRSS16Q9NQE7 514 aa3.32□□□□□ -1.88
RNU6-40P-201ENST00000384254 TSSC4Q9Y5U2 329 aaPredicted RBP3.32□□□□□ -1.88
RNU6-40P-201ENST00000384254 KPTNQ9Y664 436 aa3.32□□□□□ -1.88
RNU6-40P-201ENST00000384254 IGSF9BQ9UPX0 1349 aa3.32□□□□□ -1.88
RNU6-40P-201ENST00000384254 DOCK9Q9BZ29 2069 aa3.31□□□□□ -1.88
RNU6-40P-201ENST00000384254 NEURL4Q96JN8 1562 aa3.31□□□□□ -1.88
RNU6-40P-201ENST00000384254 TNFRSF11BO00300 401 aa3.31□□□□□ -1.88
RNU6-40P-201ENST00000384254 SOCS1O15524 211 aa3.31□□□□□ -1.88
RNU6-40P-201ENST00000384254 ETHE1O95571 254 aa3.31□□□□□ -1.88
RNU6-40P-201ENST00000384254 TGM6O95932 706 aa3.31□□□□□ -1.88
RNU6-40P-201ENST00000384254 CRYGCP07315 174 aa3.31□□□□□ -1.88
RNU6-40P-201ENST00000384254 ZNF806P0C7X5 589 aa3.31□□□□□ -1.88
RNU6-40P-201ENST00000384254 IL1RNP18510 177 aa3.31□□□□□ -1.88
RNU6-40P-201ENST00000384254 CPN2P22792 545 aa3.31□□□□□ -1.88
RNU6-40P-201ENST00000384254 ARL2P36404 184 aa3.31□□□□□ -1.88
RNU6-40P-201ENST00000384254 CFHR2P36980 270 aa3.31□□□□□ -1.88
RNU6-40P-201ENST00000384254 MYCNOSP40205 109 aa3.31□□□□□ -1.88
RNU6-40P-201ENST00000384254 OPRK1P41145 380 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms