RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 ZNF550Q7Z398 422 aa13.46□□□□□ -0.25
VLDLR-202ENST00000382099 C2orf15Q8WU43 125 aaKnown RBP13.46□□□□□ -0.25
VLDLR-202ENST00000382099 FAM46BQ96A09 425 aa13.46□□□□□ -0.25
VLDLR-202ENST00000382099 HHIPL1Q96JK4 782 aa13.46□□□□□ -0.25
VLDLR-202ENST00000382099 TSSK2Q96PF2 358 aa13.46□□□□□ -0.25
VLDLR-202ENST00000382099 SYT3Q9BQG1 590 aa13.46□□□□□ -0.25
VLDLR-202ENST00000382099 SH3BGRL3Q9H299 93 aa13.46□□□□□ -0.25
VLDLR-202ENST00000382099 GRHPRQ9UBQ7 328 aa13.46□□□□□ -0.25
VLDLR-202ENST00000382099 CENPVL1A0A0U1RR11 272 aa13.46□□□□□ -0.26
VLDLR-202ENST00000382099 CDC14BO60729 498 aa13.46□□□□□ -0.26
VLDLR-202ENST00000382099 SLC35G6P0C7Q6 338 aa13.46□□□□□ -0.26
VLDLR-202ENST00000382099 BRS3P32247 399 aa13.46□□□□□ -0.26
VLDLR-202ENST00000382099 RAB7AP51149 207 aa13.46□□□□□ -0.26
VLDLR-202ENST00000382099 SLC37A1P57057 533 aa13.46□□□□□ -0.26
VLDLR-202ENST00000382099 POM121L1PQ3SYA9 428 aa13.46□□□□□ -0.26
VLDLR-202ENST00000382099 MORN1Q5T089 497 aa13.46□□□□□ -0.26
VLDLR-202ENST00000382099 FBXW9Q5XUX1 488 aa13.46□□□□□ -0.26
VLDLR-202ENST00000382099 CBARPQ8N350 705 aaPredicted RBP13.46□□□□□ -0.26
VLDLR-202ENST00000382099 ZDHHC22Q8N966 263 aa13.46□□□□□ -0.26
VLDLR-202ENST00000382099 HIST1H2AAQ96QV6 131 aa13.46□□□□□ -0.26
VLDLR-202ENST00000382099 MACROD1Q9BQ69 325 aa13.46□□□□□ -0.26
VLDLR-202ENST00000382099 CABLES2Q9BTV7 478 aa13.46□□□□□ -0.26
VLDLR-202ENST00000382099 PLEKHA2Q9HB19 425 aa13.46□□□□□ -0.26
VLDLR-202ENST00000382099 OR52A1Q9UKL2 312 aa13.46□□□□□ -0.26
VLDLR-202ENST00000382099 PPIAL4AQ9Y536 164 aa13.46□□□□□ -0.26
VLDLR-202ENST00000382099 OPN5Q6U736 354 aa13.45□□□□□ -0.26
VLDLR-202ENST00000382099 SMIM15Q7Z3B0 74 aa13.45□□□□□ -0.26
VLDLR-202ENST00000382099 TMEM18Q96B42 140 aa13.45□□□□□ -0.26
VLDLR-202ENST00000382099 TP53RKQ96S44 253 aa13.45□□□□□ -0.26
VLDLR-202ENST00000382099 NRTNQ99748 197 aa13.45□□□□□ -0.26
VLDLR-202ENST00000382099 PRSS27Q9BQR3 290 aa13.45□□□□□ -0.26
VLDLR-202ENST00000382099 SLC17A5Q9NRA2 495 aa13.45□□□□□ -0.26
VLDLR-202ENST00000382099 RXFP3Q9NSD7 469 aa13.45□□□□□ -0.26
VLDLR-202ENST00000382099 FOXD3Q9UJU5 478 aaPredicted RBP13.45□□□□□ -0.26
VLDLR-202ENST00000382099 MEMO1Q9Y316 297 aa13.45□□□□□ -0.26
VLDLR-202ENST00000382099 LIPGQ9Y5X9 500 aa13.45□□□□□ -0.26
VLDLR-202ENST00000382099 BORCS7-ASMTA0A0B4J1R7 106 aa13.45□□□□□ -0.26
VLDLR-202ENST00000382099 LNP1A1A4G5 178 aa13.45□□□□□ -0.26
VLDLR-202ENST00000382099 DOK2O60496 412 aa13.45□□□□□ -0.26
VLDLR-202ENST00000382099 SLCO2B1O94956 709 aa13.45□□□□□ -0.26
VLDLR-202ENST00000382099 WNT5AP41221 380 aa13.45□□□□□ -0.26
VLDLR-202ENST00000382099 ELLP55199 621 aaPredicted RBP13.45□□□□□ -0.26
VLDLR-202ENST00000382099 CLEC18BQ6UXF7 455 aa13.45□□□□□ -0.26
VLDLR-202ENST00000382099 ZNF66Q6ZN08 573 aa13.45□□□□□ -0.26
VLDLR-202ENST00000382099 ZNF321PQ8N8H1 164 aa13.45□□□□□ -0.26
VLDLR-202ENST00000382099 CYB561D1Q8N8Q1 229 aa13.45□□□□□ -0.26
VLDLR-202ENST00000382099 NECAP1Q8NC96 275 aa13.45□□□□□ -0.26
VLDLR-202ENST00000382099 TMEM37Q8WXS4 190 aa13.45□□□□□ -0.26
VLDLR-202ENST00000382099 Q9N2J8 555 aa13.45□□□□□ -0.26
VLDLR-202ENST00000382099 TM7SF3Q9NS93 570 aa13.45□□□□□ -0.26
VLDLR-202ENST00000382099 FKBP11Q9NYL4 201 aa13.45□□□□□ -0.26
VLDLR-202ENST00000382099 ZNF106Q9H2Y7 1883 aaKnown RBP13.45□□□□□ -0.26
VLDLR-202ENST00000382099 LOC102724200A0A096LPH7 203 aaPredicted RBP13.45□□□□□ -0.26
VLDLR-202ENST00000382099 A6NIZ1 184 aa13.45□□□□□ -0.26
VLDLR-202ENST00000382099 METTL12A8MUP2 240 aa13.45□□□□□ -0.26
VLDLR-202ENST00000382099 FTCDNL1E5RQL4 147 aa13.45□□□□□ -0.26
VLDLR-202ENST00000382099 KLKB1P03952 638 aa13.45□□□□□ -0.26
VLDLR-202ENST00000382099 ZNF888P0CJ79 500 aaPredicted RBP13.45□□□□□ -0.26
VLDLR-202ENST00000382099 GABRR1P24046 479 aa13.45□□□□□ -0.26
VLDLR-202ENST00000382099 CHRNB4P30926 498 aa13.45□□□□□ -0.26
VLDLR-202ENST00000382099 CTHP32929 405 aa13.45□□□□□ -0.26
VLDLR-202ENST00000382099 GALNSP34059 522 aa13.45□□□□□ -0.26
VLDLR-202ENST00000382099 RAP1BP61224 184 aa13.45□□□□□ -0.26
VLDLR-202ENST00000382099 COL10A1Q03692 680 aa13.45□□□□□ -0.26
VLDLR-202ENST00000382099 SQSTM1Q13501 440 aa13.45□□□□□ -0.26
VLDLR-202ENST00000382099 CDKN3Q16667 212 aa13.45□□□□□ -0.26
VLDLR-202ENST00000382099 IAH1Q2TAA2 248 aaPredicted RBP13.45□□□□□ -0.26
VLDLR-202ENST00000382099 FAM78AQ5JUQ0 283 aa13.45□□□□□ -0.26
VLDLR-202ENST00000382099 RNF44Q7L0R7 432 aa13.45□□□□□ -0.26
VLDLR-202ENST00000382099 DEFB128Q7Z7B8 93 aa13.45□□□□□ -0.26
VLDLR-202ENST00000382099 OR4X1Q8NH49 305 aa13.45□□□□□ -0.26
VLDLR-202ENST00000382099 ZPLD1Q8TCW7 415 aa13.45□□□□□ -0.26
VLDLR-202ENST00000382099 HAS2Q92819 552 aa13.45□□□□□ -0.26
VLDLR-202ENST00000382099 HLA-CQ95604 372 aa13.45□□□□□ -0.26
VLDLR-202ENST00000382099 ERGIC1Q969X5 290 aa13.45□□□□□ -0.26
VLDLR-202ENST00000382099 C2orf50Q96LR7 162 aa13.45□□□□□ -0.26
VLDLR-202ENST00000382099 OR2J1Q9GZK6 312 aa13.45□□□□□ -0.26
VLDLR-202ENST00000382099 NCOR1P1Q9H4R4 102 aa13.45□□□□□ -0.26
VLDLR-202ENST00000382099 HPRT1P00492 218 aa13.44□□□□□ -0.26
VLDLR-202ENST00000382099 AKR1A1P14550 325 aa13.44□□□□□ -0.26
VLDLR-202ENST00000382099 MMP9P14780 707 aa13.44□□□□□ -0.26
VLDLR-202ENST00000382099 BSGP35613 385 aa13.44□□□□□ -0.26
VLDLR-202ENST00000382099 GLIPR1P48060 266 aa13.44□□□□□ -0.26
VLDLR-202ENST00000382099 MMP16P51512 607 aa13.44□□□□□ -0.26
VLDLR-202ENST00000382099 PRAMEF14Q5SWL7 426 aa13.44□□□□□ -0.26
VLDLR-202ENST00000382099 ABLIM2Q6H8Q1 611 aa13.44□□□□□ -0.26
VLDLR-202ENST00000382099 CHST9Q7L1S5 443 aa13.44□□□□□ -0.26
VLDLR-202ENST00000382099 CACUL1Q86Y37 369 aa13.44□□□□□ -0.26
VLDLR-202ENST00000382099 SCRT1Q9BWW7 348 aa13.44□□□□□ -0.26
VLDLR-202ENST00000382099 OR8D2Q9GZM6 311 aa13.44□□□□□ -0.26
VLDLR-202ENST00000382099 CHST11Q9NPF2 352 aa13.44□□□□□ -0.26
VLDLR-202ENST00000382099 DKKL1Q9UK85 242 aa13.44□□□□□ -0.26
VLDLR-202ENST00000382099 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.44□□□□□ -0.26
VLDLR-202ENST00000382099 RBFOX3A6NFN3 312 aa13.44□□□□□ -0.26
VLDLR-202ENST00000382099 ABLIM3O94929 683 aa13.44□□□□□ -0.26
VLDLR-202ENST00000382099 DANCRP0C864 163 aa13.44□□□□□ -0.26
VLDLR-202ENST00000382099 DIO1P49895 249 aa13.44□□□□□ -0.26
VLDLR-202ENST00000382099 ASCL1P50553 236 aa13.44□□□□□ -0.26
VLDLR-202ENST00000382099 FAM3AP98173 230 aa13.44□□□□□ -0.26
VLDLR-202ENST00000382099 P2RY6Q15077 328 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms