RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 SFTPA2Q8IWL1 248 aa5.33□□□□□ -1.56
RFX3-204ENST00000382004 SFTPA1Q8IWL2 248 aa5.33□□□□□ -1.56
RFX3-204ENST00000382004 ARL6IP6Q8N6S5 226 aa5.33□□□□□ -1.56
RFX3-204ENST00000382004 C1QTNF3Q9BXJ4 246 aa5.33□□□□□ -1.56
RFX3-204ENST00000382004 OR51B4Q9Y5P0 310 aa5.33□□□□□ -1.56
RFX3-204ENST00000382004 TLCD2A6NGC4 264 aa5.33□□□□□ -1.56
RFX3-204ENST00000382004 CAMPP49913 170 aa5.33□□□□□ -1.56
RFX3-204ENST00000382004 DHODHQ02127 395 aa5.33□□□□□ -1.56
RFX3-204ENST00000382004 TRMT12Q53H54 448 aaKnown RBP5.33□□□□□ -1.56
RFX3-204ENST00000382004 LRRC10Q5BKY1 277 aa5.33□□□□□ -1.56
RFX3-204ENST00000382004 Q6ZN92 141 aa5.33□□□□□ -1.56
RFX3-204ENST00000382004 RPS19BP1Q86WX3 136 aaKnown RBP5.33□□□□□ -1.56
RFX3-204ENST00000382004 GALNT16Q8N428 558 aa5.33□□□□□ -1.56
RFX3-204ENST00000382004 TCTEX1D1Q8N7M0 179 aa5.33□□□□□ -1.56
RFX3-204ENST00000382004 PHYHIPQ92561 330 aa5.33□□□□□ -1.56
RFX3-204ENST00000382004 SLC25A46Q96AG3 418 aa5.33□□□□□ -1.56
RFX3-204ENST00000382004 SLC39A13Q96H72 371 aa5.33□□□□□ -1.56
RFX3-204ENST00000382004 CXorf58Q96LI9 332 aa5.33□□□□□ -1.56
RFX3-204ENST00000382004 C2orf50Q96LR7 162 aa5.33□□□□□ -1.56
RFX3-204ENST00000382004 ZNF346Q9UL40 294 aaKnown RBP5.33□□□□□ -1.56
RFX3-204ENST00000382004 A0A1B0GX78 115 aa5.33□□□□□ -1.56
RFX3-204ENST00000382004 SLC35E2P0CK97 266 aa5.33□□□□□ -1.56
RFX3-204ENST00000382004 G6PCP35575 357 aa5.33□□□□□ -1.56
RFX3-204ENST00000382004 GNG4P50150 75 aa5.33□□□□□ -1.56
RFX3-204ENST00000382004 TMEM179BQ7Z7N9 219 aa5.33□□□□□ -1.56
RFX3-204ENST00000382004 CXorf67Q86X51 503 aaPredicted RBP5.33□□□□□ -1.56
RFX3-204ENST00000382004 EIF4E3Q8N5X7 224 aaKnown RBP5.33□□□□□ -1.56
RFX3-204ENST00000382004 ZNF485Q8NCK3 441 aa5.33□□□□□ -1.56
RFX3-204ENST00000382004 NXPE3Q969Y0 559 aa5.33□□□□□ -1.56
RFX3-204ENST00000382004 NEURL3Q96EH8 262 aa5.33□□□□□ -1.56
RFX3-204ENST00000382004 HSD17B10Q99714 261 aaKnown RBP5.33□□□□□ -1.56
RFX3-204ENST00000382004 RNF24Q9Y225 148 aa5.33□□□□□ -1.56
RFX3-204ENST00000382004 AUP1Q9Y679 476 aa5.33□□□□□ -1.56
RFX3-204ENST00000382004 IGKV3-7A0A075B6H7 116 aa5.32□□□□□ -1.56
RFX3-204ENST00000382004 OR2T8A6NH00 312 aa5.32□□□□□ -1.56
RFX3-204ENST00000382004 SLC2A10O95528 541 aa5.32□□□□□ -1.56
RFX3-204ENST00000382004 OR3A1P47881 315 aa5.32□□□□□ -1.56
RFX3-204ENST00000382004 HERVK_113P61574 105 aa5.32□□□□□ -1.56
RFX3-204ENST00000382004 ZNF252P-AS1Q0IIN9 211 aa5.32□□□□□ -1.56
RFX3-204ENST00000382004 PJVKQ0ZLH3 352 aa5.32□□□□□ -1.56
RFX3-204ENST00000382004 ZNF788Q6ZQV5 615 aa5.32□□□□□ -1.56
RFX3-204ENST00000382004 FBXO17Q96EF6 278 aa5.32□□□□□ -1.56
RFX3-204ENST00000382004 MRPL37Q9BZE1 423 aaKnown RBP5.32□□□□□ -1.56
RFX3-204ENST00000382004 OCEL1Q9H607 264 aa5.32□□□□□ -1.56
RFX3-204ENST00000382004 SLC25A22Q9H936 323 aa5.32□□□□□ -1.56
RFX3-204ENST00000382004 TMEM140Q9NV12 185 aa5.32□□□□□ -1.56
RFX3-204ENST00000382004 IL17BQ9UHF5 180 aa5.32□□□□□ -1.56
RFX3-204ENST00000382004 OR4E1P0C645 316 aa5.32□□□□□ -1.56
RFX3-204ENST00000382004 DLX1P56177 255 aa5.32□□□□□ -1.56
RFX3-204ENST00000382004 DEFB103AP81534 67 aa5.32□□□□□ -1.56
RFX3-204ENST00000382004 HOXA4Q00056 320 aaPredicted RBP5.32□□□□□ -1.56
RFX3-204ENST00000382004 ETV3LQ6ZN32 361 aa5.32□□□□□ -1.56
RFX3-204ENST00000382004 RBPMS2Q6ZRY4 209 aaKnown RBP5.32□□□□□ -1.56
RFX3-204ENST00000382004 RFLNAQ6ZTI6 216 aa5.32□□□□□ -1.56
RFX3-204ENST00000382004 TMEM99Q8N816 258 aa5.32□□□□□ -1.56
RFX3-204ENST00000382004 OR52B4Q8NGK2 314 aa5.32□□□□□ -1.56
RFX3-204ENST00000382004 OR1L3Q8NH93 324 aa5.32□□□□□ -1.56
RFX3-204ENST00000382004 RTN4IP1Q8WWV3 396 aaPredicted RBP5.32□□□□□ -1.56
RFX3-204ENST00000382004 OR10C1Q96KK4 312 aa5.32□□□□□ -1.56
RFX3-204ENST00000382004 ZPBPQ9BS86 351 aa5.32□□□□□ -1.56
RFX3-204ENST00000382004 ZNF391Q9UJN7 358 aa5.32□□□□□ -1.56
RFX3-204ENST00000382004 FZR1Q9UM11 496 aa5.32□□□□□ -1.56
RFX3-204ENST00000382004 NID2Q14112 1375 aa5.32□□□□□ -1.56
RFX3-204ENST00000382004 M0R3E3 92 aa5.32□□□□□ -1.56
RFX3-204ENST00000382004 ORM1P02763 201 aa5.32□□□□□ -1.56
RFX3-204ENST00000382004 MGPP08493 103 aa5.32□□□□□ -1.56
RFX3-204ENST00000382004 HIST1H1CP16403 213 aaKnown RBP5.32□□□□□ -1.56
RFX3-204ENST00000382004 BCL6P41182 706 aa5.32□□□□□ -1.56
RFX3-204ENST00000382004 ADIPOQQ15848 244 aa5.32□□□□□ -1.56
RFX3-204ENST00000382004 SPINK9Q5DT21 86 aa5.32□□□□□ -1.56
RFX3-204ENST00000382004 ZNF740Q8NDX6 193 aa5.32□□□□□ -1.56
RFX3-204ENST00000382004 LRRC15Q8TF66 581 aa5.32□□□□□ -1.56
RFX3-204ENST00000382004 DPH3Q96FX2 82 aa5.32□□□□□ -1.56
RFX3-204ENST00000382004 MS4A10Q96PG2 267 aa5.32□□□□□ -1.56
RFX3-204ENST00000382004 ATOH8Q96SQ7 321 aa5.32□□□□□ -1.56
RFX3-204ENST00000382004 MS4A8Q9BY19 250 aa5.32□□□□□ -1.56
RFX3-204ENST00000382004 RHOFQ9HBH0 211 aa5.32□□□□□ -1.56
RFX3-204ENST00000382004 EMCNQ9ULC0 261 aa5.32□□□□□ -1.56
RFX3-204ENST00000382004 TARBP1Q13395 1621 aaKnown RBP5.32□□□□□ -1.56
RFX3-204ENST00000382004 PEAK1Q9H792 1746 aa5.32□□□□□ -1.56
RFX3-204ENST00000382004 SHROOM3Q8TF72 1996 aa5.32□□□□□ -1.56
RFX3-204ENST00000382004 MROH2AA6NES4 1674 aa5.32□□□□□ -1.56
RFX3-204ENST00000382004 TMEM265A0A087WTH1 108 aa5.32□□□□□ -1.56
RFX3-204ENST00000382004 SHISA7A6NL88 538 aa5.32□□□□□ -1.56
RFX3-204ENST00000382004 M0R2Z0 102 aa5.32□□□□□ -1.56
RFX3-204ENST00000382004 FCN1O00602 326 aa5.32□□□□□ -1.56
RFX3-204ENST00000382004 ST8SIA5O15466 376 aa5.32□□□□□ -1.56
RFX3-204ENST00000382004 KRASP01116 189 aa5.32□□□□□ -1.56
RFX3-204ENST00000382004 LIPAP38571 399 aa5.32□□□□□ -1.56
RFX3-204ENST00000382004 SIX1Q15475 284 aaPredicted RBP5.32□□□□□ -1.56
RFX3-204ENST00000382004 FAM78AQ5JUQ0 283 aa5.32□□□□□ -1.56
RFX3-204ENST00000382004 PRSS36Q5K4E3 855 aa5.32□□□□□ -1.56
RFX3-204ENST00000382004 SLC25A26Q70HW3 274 aa5.32□□□□□ -1.56
RFX3-204ENST00000382004 SLC16A11Q8NCK7 471 aa5.32□□□□□ -1.56
RFX3-204ENST00000382004 OR4D10Q8NGI6 311 aa5.32□□□□□ -1.56
RFX3-204ENST00000382004 UBALD1Q8TB05 177 aa5.32□□□□□ -1.56
RFX3-204ENST00000382004 TXLNGYQ9BZA5 131 aa5.32□□□□□ -1.56
RFX3-204ENST00000382004 TREX1Q9NSU2 369 aa5.32□□□□□ -1.56
RFX3-204ENST00000382004 ST3GAL6Q9Y274 331 aa5.32□□□□□ -1.56
RFX3-204ENST00000382004 NUMBLQ9Y6R0 609 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms