RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 BCL2L15Q5TBC7 163 aa13.23□□□□□ -0.29
PDGFB-202ENST00000381551 OR2T2Q6IF00 324 aa13.23□□□□□ -0.29
PDGFB-202ENST00000381551 PRSS48Q7RTY5 328 aa13.23□□□□□ -0.29
PDGFB-202ENST00000381551 OR2G2Q8NGZ5 317 aa13.23□□□□□ -0.29
PDGFB-202ENST00000381551 REEP6Q96HR9 211 aa13.23□□□□□ -0.29
PDGFB-202ENST00000381551 LYZL4Q96KX0 146 aa13.23□□□□□ -0.29
PDGFB-202ENST00000381551 TAAR3PQ9P1P4 343 aa13.23□□□□□ -0.29
PDGFB-202ENST00000381551 ST6GALNAC2Q9UJ37 374 aa13.23□□□□□ -0.29
PDGFB-202ENST00000381551 PURGQ9UJV8 347 aaKnown RBP13.23□□□□□ -0.29
PDGFB-202ENST00000381551 EDARQ9UNE0 448 aa13.23□□□□□ -0.29
PDGFB-202ENST00000381551 ERGIC3Q9Y282 383 aa13.23□□□□□ -0.29
PDGFB-202ENST00000381551 A0A1W2PPW3 197 aa13.22□□□□□ -0.29
PDGFB-202ENST00000381551 MT-ND2P03891 347 aa13.22□□□□□ -0.29
PDGFB-202ENST00000381551 RAF1P04049 648 aa13.22□□□□□ -0.29
PDGFB-202ENST00000381551 BMP4P12644 408 aa13.22□□□□□ -0.29
PDGFB-202ENST00000381551 CFL1P23528 166 aaKnown RBP13.22□□□□□ -0.29
PDGFB-202ENST00000381551 EEF1B2P24534 225 aaKnown RBP13.22□□□□□ -0.29
PDGFB-202ENST00000381551 TGM4P49221 684 aa13.22□□□□□ -0.29
PDGFB-202ENST00000381551 MMP15P51511 669 aa13.22□□□□□ -0.29
PDGFB-202ENST00000381551 GTF2A1P52655 376 aaPredicted RBP13.22□□□□□ -0.29
PDGFB-202ENST00000381551 PRSS12P56730 875 aa13.22□□□□□ -0.29
PDGFB-202ENST00000381551 GABARAPL2P60520 117 aa13.22□□□□□ -0.29
PDGFB-202ENST00000381551 SNRPD2P62316 118 aaKnown RBP13.22□□□□□ -0.29
PDGFB-202ENST00000381551 CCDC58Q4VC31 144 aa13.22□□□□□ -0.29
PDGFB-202ENST00000381551 MRPL21Q7Z2W9 205 aaKnown RBP13.22□□□□□ -0.29
PDGFB-202ENST00000381551 KLBQ86Z14 1044 aa13.22□□□□□ -0.29
PDGFB-202ENST00000381551 OR51E1Q8TCB6 317 aa13.22□□□□□ -0.29
PDGFB-202ENST00000381551 HAVCR2Q8TDQ0 301 aa13.22□□□□□ -0.29
PDGFB-202ENST00000381551 PIGTQ969N2 578 aa13.22□□□□□ -0.29
PDGFB-202ENST00000381551 CCL19Q99731 98 aa13.22□□□□□ -0.29
PDGFB-202ENST00000381551 SOX7Q9BT81 388 aa13.22□□□□□ -0.29
PDGFB-202ENST00000381551 OPA3Q9H6K4 179 aa13.22□□□□□ -0.29
PDGFB-202ENST00000381551 ZNF391Q9UJN7 358 aa13.22□□□□□ -0.29
PDGFB-202ENST00000381551 FBXO9Q9UK97 447 aaPredicted RBP13.22□□□□□ -0.29
PDGFB-202ENST00000381551 GTF2A1LQ9UNN4 478 aa13.22□□□□□ -0.29
PDGFB-202ENST00000381551 LRCH1Q9Y2L9 728 aa13.22□□□□□ -0.29
PDGFB-202ENST00000381551 A0A1B0GTI1 187 aa13.21□□□□□ -0.29
PDGFB-202ENST00000381551 hCG_38984A0A1B0GV85 526 aa13.21□□□□□ -0.29
PDGFB-202ENST00000381551 TRIM64A6NGJ6 449 aa13.21□□□□□ -0.29
PDGFB-202ENST00000381551 OR4C45A6NMZ5 311 aa13.21□□□□□ -0.29
PDGFB-202ENST00000381551 CD300LBA8K4G0 201 aa13.21□□□□□ -0.29
PDGFB-202ENST00000381551 IQCF6A8MYZ5 107 aa13.21□□□□□ -0.29
PDGFB-202ENST00000381551 MRPS14O60783 128 aaKnown RBP13.21□□□□□ -0.29
PDGFB-202ENST00000381551 LALBAP00709 142 aa13.21□□□□□ -0.29
PDGFB-202ENST00000381551 SELEP16581 610 aa13.21□□□□□ -0.29
PDGFB-202ENST00000381551 ALDH3B1P43353 468 aa13.21□□□□□ -0.29
PDGFB-202ENST00000381551 KIR3DL2P43630 455 aa13.21□□□□□ -0.29
PDGFB-202ENST00000381551 GSK3AP49840 483 aa13.21□□□□□ -0.29
PDGFB-202ENST00000381551 WNT4P56705 351 aa13.21□□□□□ -0.29
PDGFB-202ENST00000381551 TNK1Q13470 666 aa13.21□□□□□ -0.29
PDGFB-202ENST00000381551 ALKBH1Q13686 389 aaKnown RBP13.21□□□□□ -0.29
PDGFB-202ENST00000381551 GFOD2Q3B7J2 385 aa13.21□□□□□ -0.29
PDGFB-202ENST00000381551 XAF1Q6GPH4 301 aa13.21□□□□□ -0.29
PDGFB-202ENST00000381551 RPL22L1Q6P5R6 122 aaKnown RBP13.21□□□□□ -0.29
PDGFB-202ENST00000381551 PLPP7Q8NBV4 271 aa13.21□□□□□ -0.29
PDGFB-202ENST00000381551 CCDC90BQ9GZT6 254 aa13.21□□□□□ -0.29
PDGFB-202ENST00000381551 MS4A5Q9H3V2 200 aa13.21□□□□□ -0.29
PDGFB-202ENST00000381551 GPR84Q9NQS5 396 aa13.21□□□□□ -0.29
PDGFB-202ENST00000381551 GPR160Q9UJ42 338 aa13.21□□□□□ -0.29
PDGFB-202ENST00000381551 PLEKHA6Q9Y2H5 1048 aa13.21□□□□□ -0.29
PDGFB-202ENST00000381551 PMF1-BGLAPU3KQ54 211 aa13.21□□□□□ -0.29
PDGFB-202ENST00000381551 ARFGEF3Q5TH69 2177 aa13.21□□□□□ -0.3
PDGFB-202ENST00000381551 POLQO75417 2590 aa13.21□□□□□ -0.3
PDGFB-202ENST00000381551 GGT3PA6NGU5 568 aa13.2□□□□□ -0.3
PDGFB-202ENST00000381551 M0R233 179 aa13.2□□□□□ -0.3
PDGFB-202ENST00000381551 P2RY10O00398 339 aa13.2□□□□□ -0.3
PDGFB-202ENST00000381551 MYL12BO14950 172 aa13.2□□□□□ -0.3
PDGFB-202ENST00000381551 OGG1O15527 345 aa13.2□□□□□ -0.3
PDGFB-202ENST00000381551 TIMM8AO60220 97 aaPredicted RBP13.2□□□□□ -0.3
PDGFB-202ENST00000381551 LILRA1O75019 489 aa13.2□□□□□ -0.3
PDGFB-202ENST00000381551 ISG15P05161 165 aa13.2□□□□□ -0.3
PDGFB-202ENST00000381551 NAT2P11245 290 aa13.2□□□□□ -0.3
PDGFB-202ENST00000381551 LIPAP38571 399 aa13.2□□□□□ -0.3
PDGFB-202ENST00000381551 DDOSTP39656 456 aa13.2□□□□□ -0.3
PDGFB-202ENST00000381551 DOC2BQ14184 412 aa13.2□□□□□ -0.3
PDGFB-202ENST00000381551 NKPD1Q17RQ9 610 aa13.2□□□□□ -0.3
PDGFB-202ENST00000381551 ODF4Q2M2E3 257 aa13.2□□□□□ -0.3
PDGFB-202ENST00000381551 RDH10Q8IZV5 341 aa13.2□□□□□ -0.3
PDGFB-202ENST00000381551 ZCCHC24Q8N2G6 241 aaKnown RBP13.2□□□□□ -0.3
PDGFB-202ENST00000381551 OR8G5Q8NG78 346 aa13.2□□□□□ -0.3
PDGFB-202ENST00000381551 ITFG2Q969R8 447 aa13.2□□□□□ -0.3
PDGFB-202ENST00000381551 MND1Q9BWT6 205 aa13.2□□□□□ -0.3
PDGFB-202ENST00000381551 CACNG6Q9BXT2 260 aa13.2□□□□□ -0.3
PDGFB-202ENST00000381551 CYSLTR2Q9NS75 346 aa13.2□□□□□ -0.3
PDGFB-202ENST00000381551 CGGBP1Q9UFW8 167 aaPredicted RBP13.2□□□□□ -0.3
PDGFB-202ENST00000381551 LSM2Q9Y333 95 aaKnown RBP13.2□□□□□ -0.3
PDGFB-202ENST00000381551 SIRT4Q9Y6E7 314 aaPredicted RBP13.2□□□□□ -0.3
PDGFB-202ENST00000381551 PDZD2O15018 2839 aa13.2□□□□□ -0.3
PDGFB-202ENST00000381551 TEX15Q9BXT5 2789 aa13.19□□□□□ -0.3
PDGFB-202ENST00000381551 TRBV2A0A0J9YWF9 115 aa13.19□□□□□ -0.3
PDGFB-202ENST00000381551 LOC390937A0A1W2PQ73 354 aa13.19□□□□□ -0.3
PDGFB-202ENST00000381551 PLSCR5A0PG75 271 aa13.19□□□□□ -0.3
PDGFB-202ENST00000381551 H7C417 338 aa13.19□□□□□ -0.3
PDGFB-202ENST00000381551 PAX1P15863 534 aa13.19□□□□□ -0.3
PDGFB-202ENST00000381551 CCL1P22362 96 aa13.19□□□□□ -0.3
PDGFB-202ENST00000381551 DNASE1P24855 282 aa13.19□□□□□ -0.3
PDGFB-202ENST00000381551 CDKN1AP38936 164 aa13.19□□□□□ -0.3
PDGFB-202ENST00000381551 MAP2K4P45985 399 aa13.19□□□□□ -0.3
PDGFB-202ENST00000381551 PPOXP50336 477 aa13.19□□□□□ -0.3
PDGFB-202ENST00000381551 CHN2P52757 468 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms