RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 S100A12P80511 92 aa11.14□□□□□ -0.63
VPS16-202ENST00000380445 Q0VFX4 171 aa11.14□□□□□ -0.63
VPS16-202ENST00000380445 FAM189A2Q15884 450 aa11.14□□□□□ -0.63
VPS16-202ENST00000380445 ZNF626Q68DY1 528 aa11.14□□□□□ -0.63
VPS16-202ENST00000380445 BEST3Q8N1M1 668 aa11.14□□□□□ -0.63
VPS16-202ENST00000380445 OR13C9Q8NGT0 318 aa11.14□□□□□ -0.63
VPS16-202ENST00000380445 ZNF385AQ96PM9 386 aaKnown RBP11.14□□□□□ -0.63
VPS16-202ENST00000380445 NKX3-1Q99801 234 aaPredicted RBP11.14□□□□□ -0.63
VPS16-202ENST00000380445 SEC22CQ9BRL7 303 aa11.14□□□□□ -0.63
VPS16-202ENST00000380445 SAV1Q9H4B6 383 aaPredicted RBP11.14□□□□□ -0.63
VPS16-202ENST00000380445 GPR84Q9NQS5 396 aa11.14□□□□□ -0.63
VPS16-202ENST00000380445 P4HTMQ9NXG6 502 aa11.14□□□□□ -0.63
VPS16-202ENST00000380445 RDH8Q9NYR8 311 aa11.14□□□□□ -0.63
VPS16-202ENST00000380445 FBLN5Q9UBX5 448 aa11.14□□□□□ -0.63
VPS16-202ENST00000380445 ZNF69Q9UC07 566 aa11.14□□□□□ -0.63
VPS16-202ENST00000380445 NUPL2O15504 423 aaKnown RBP11.14□□□□□ -0.63
VPS16-202ENST00000380445 SNAPC5O75971 98 aa11.14□□□□□ -0.63
VPS16-202ENST00000380445 CD3DP04234 171 aa11.14□□□□□ -0.63
VPS16-202ENST00000380445 ZNF93P35789 620 aaPredicted RBP11.14□□□□□ -0.63
VPS16-202ENST00000380445 ZP1P60852 638 aa11.14□□□□□ -0.63
VPS16-202ENST00000380445 RAB14P61106 215 aa11.14□□□□□ -0.63
VPS16-202ENST00000380445 Q6ZTK2 550 aa11.14□□□□□ -0.63
VPS16-202ENST00000380445 TMEM123Q8N131 208 aa11.14□□□□□ -0.63
VPS16-202ENST00000380445 GABRG1Q8N1C3 465 aa11.14□□□□□ -0.63
VPS16-202ENST00000380445 UCN2Q96RP3 112 aa11.14□□□□□ -0.63
VPS16-202ENST00000380445 NUDT16L1Q9BRJ7 211 aaKnown RBP11.14□□□□□ -0.63
VPS16-202ENST00000380445 SLC6A15Q9H2J7 730 aa11.14□□□□□ -0.63
VPS16-202ENST00000380445 PCDHB16Q9NRJ7 776 aa11.14□□□□□ -0.63
VPS16-202ENST00000380445 RHBDD3Q9Y3P4 386 aa11.14□□□□□ -0.63
VPS16-202ENST00000380445 MUC3AQ02505 3323 aa11.13□□□□□ -0.63
VPS16-202ENST00000380445 WDR87Q6ZQQ6 2873 aa11.13□□□□□ -0.63
VPS16-202ENST00000380445 RPS10-NUDT3A0A1W2PQS6 291 aa11.13□□□□□ -0.63
VPS16-202ENST00000380445 MEIS3P1A6NDR6 274 aa11.13□□□□□ -0.63
VPS16-202ENST00000380445 MASP2O00187 686 aa11.13□□□□□ -0.63
VPS16-202ENST00000380445 RAB3DO95716 219 aa11.13□□□□□ -0.63
VPS16-202ENST00000380445 ANXA7P20073 488 aaKnown RBP11.13□□□□□ -0.63
VPS16-202ENST00000380445 CARD18P57730 90 aa11.13□□□□□ -0.63
VPS16-202ENST00000380445 B3GNTL1Q67FW5 361 aaPredicted RBP11.13□□□□□ -0.63
VPS16-202ENST00000380445 SEZ6L2Q6UXD5 910 aa11.13□□□□□ -0.63
VPS16-202ENST00000380445 FAM57BQ71RH2 274 aa11.13□□□□□ -0.63
VPS16-202ENST00000380445 OR11H4Q8NGC9 324 aa11.13□□□□□ -0.63
VPS16-202ENST00000380445 OR51S1Q8NGJ8 323 aa11.13□□□□□ -0.63
VPS16-202ENST00000380445 OR2T35Q8NGX2 323 aa11.13□□□□□ -0.63
VPS16-202ENST00000380445 RADILQ96JH8 1075 aa11.13□□□□□ -0.63
VPS16-202ENST00000380445 RBM24Q9BX46 236 aaKnown RBP11.13□□□□□ -0.63
VPS16-202ENST00000380445 GPR87Q9BY21 358 aa11.13□□□□□ -0.63
VPS16-202ENST00000380445 ULBP2Q9BZM5 246 aa11.13□□□□□ -0.63
VPS16-202ENST00000380445 COL27A1Q8IZC6 1860 aaPredicted RBP11.13□□□□□ -0.63
VPS16-202ENST00000380445 PHF3Q92576 2039 aaKnown RBP11.13□□□□□ -0.63
VPS16-202ENST00000380445 PYCARD-AS1I3L0S3 204 aa11.13□□□□□ -0.63
VPS16-202ENST00000380445 IFNA7P01567 189 aa11.13□□□□□ -0.63
VPS16-202ENST00000380445 TPOP07202 933 aa11.13□□□□□ -0.63
VPS16-202ENST00000380445 MELTFP08582 738 aa11.13□□□□□ -0.63
VPS16-202ENST00000380445 B3GALT5-AS1P59052 145 aa11.13□□□□□ -0.63
VPS16-202ENST00000380445 EIF3IQ13347 325 aaKnown RBP11.13□□□□□ -0.63
VPS16-202ENST00000380445 AWAT2Q6E213 333 aa11.13□□□□□ -0.63
VPS16-202ENST00000380445 ANGPTL5Q86XS5 388 aa11.13□□□□□ -0.63
VPS16-202ENST00000380445 CCDC54Q8NEL0 328 aa11.13□□□□□ -0.63
VPS16-202ENST00000380445 OR8S1Q8NH09 359 aa11.13□□□□□ -0.63
VPS16-202ENST00000380445 PGAM5Q96HS1 289 aa11.13□□□□□ -0.63
VPS16-202ENST00000380445 GAL3ST1Q99999 423 aa11.13□□□□□ -0.63
VPS16-202ENST00000380445 SLC25A21Q9BQT8 299 aaPredicted RBP11.13□□□□□ -0.63
VPS16-202ENST00000380445 DPCDQ9BVM2 203 aaPredicted RBP11.13□□□□□ -0.63
VPS16-202ENST00000380445 SPRY4Q9C004 299 aa11.13□□□□□ -0.63
VPS16-202ENST00000380445 MGAT4CQ9UBM8 478 aa11.13□□□□□ -0.63
VPS16-202ENST00000380445 FOXD3Q9UJU5 478 aaPredicted RBP11.13□□□□□ -0.63
VPS16-202ENST00000380445 PRSS44E7EML9 344 aa11.12□□□□□ -0.63
VPS16-202ENST00000380445 RLN1P04808 185 aa11.12□□□□□ -0.63
VPS16-202ENST00000380445 SLC2A1P11166 492 aa11.12□□□□□ -0.63
VPS16-202ENST00000380445 PLA2G2CQ5R387 149 aa11.12□□□□□ -0.63
VPS16-202ENST00000380445 OR10K2Q6IF99 312 aa11.12□□□□□ -0.63
VPS16-202ENST00000380445 JMJD6Q6NYC1 403 aaPredicted RBP11.12□□□□□ -0.63
VPS16-202ENST00000380445 NLRC3Q7RTR2 1065 aa11.12□□□□□ -0.63
VPS16-202ENST00000380445 OR2W3Q7Z3T1 314 aa11.12□□□□□ -0.63
VPS16-202ENST00000380445 YRDCQ86U90 279 aaKnown RBP11.12□□□□□ -0.63
VPS16-202ENST00000380445 ZNF584Q8IVC4 421 aa11.12□□□□□ -0.63
VPS16-202ENST00000380445 C20orf196Q8IYI0 205 aa11.12□□□□□ -0.63
VPS16-202ENST00000380445 FAM71F1Q96KD3 344 aaPredicted RBP11.12□□□□□ -0.63
VPS16-202ENST00000380445 SFXN2Q96NB2 322 aa11.12□□□□□ -0.63
VPS16-202ENST00000380445 DCAF16Q9NXF7 216 aa11.12□□□□□ -0.63
VPS16-202ENST00000380445 MYEF2Q9P2K5 600 aaKnown RBP11.12□□□□□ -0.63
VPS16-202ENST00000380445 PRELID3BQ9Y3B1 194 aa11.12□□□□□ -0.63
VPS16-202ENST00000380445 ZDBF2Q9HCK1 2354 aa11.12□□□□□ -0.63
VPS16-202ENST00000380445 ZNF736B4DX44 427 aaPredicted RBP11.12□□□□□ -0.63
VPS16-202ENST00000380445 C21orf140B9A014 251 aa11.12□□□□□ -0.63
VPS16-202ENST00000380445 SELENOPP49908 381 aa11.12□□□□□ -0.63
VPS16-202ENST00000380445 OC90Q02509 493 aaPredicted RBP11.12□□□□□ -0.63
VPS16-202ENST00000380445 ENDOGQ14249 297 aaKnown RBP11.12□□□□□ -0.63
VPS16-202ENST00000380445 NAXDQ8IW45 347 aa11.12□□□□□ -0.63
VPS16-202ENST00000380445 ZIC4Q8N9L1 334 aa11.12□□□□□ -0.63
VPS16-202ENST00000380445 ACBD4Q8NC06 268 aa11.12□□□□□ -0.63
VPS16-202ENST00000380445 OR4D10Q8NGI6 311 aa11.12□□□□□ -0.63
VPS16-202ENST00000380445 CCDC107Q8WV48 283 aa11.12□□□□□ -0.63
VPS16-202ENST00000380445 AQP3Q92482 292 aa11.12□□□□□ -0.63
VPS16-202ENST00000380445 NKD1Q969G9 470 aa11.12□□□□□ -0.63
VPS16-202ENST00000380445 NABP1Q96AH0 204 aa11.12□□□□□ -0.63
VPS16-202ENST00000380445 SRXN1Q9BYN0 137 aa11.12□□□□□ -0.63
VPS16-202ENST00000380445 FAM117AQ9C073 453 aa11.12□□□□□ -0.63
VPS16-202ENST00000380445 SHARPINQ9H0F6 387 aa11.12□□□□□ -0.63
VPS16-202ENST00000380445 ALX4Q9H161 411 aaPredicted RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms