RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 BGLAPP02818 100 aa12.66□□□□□ -0.38
SHROOM1-203ENST00000378679 IGKV3-11P04433 115 aa12.66□□□□□ -0.38
SHROOM1-203ENST00000378679 FAHP16930 419 aa12.66□□□□□ -0.38
SHROOM1-203ENST00000378679 AGTR1P30556 359 aa12.66□□□□□ -0.38
SHROOM1-203ENST00000378679 ETV6P41212 452 aa12.66□□□□□ -0.38
SHROOM1-203ENST00000378679 ASAH1Q13510 395 aa12.66□□□□□ -0.38
SHROOM1-203ENST00000378679 GNMTQ14749 295 aa12.66□□□□□ -0.38
SHROOM1-203ENST00000378679 TBC1D28Q2M2D7 210 aa12.66□□□□□ -0.38
SHROOM1-203ENST00000378679 STPG1Q5TH74 334 aa12.66□□□□□ -0.38
SHROOM1-203ENST00000378679 RTL6Q6ICC9 239 aa12.66□□□□□ -0.38
SHROOM1-203ENST00000378679 LCN10Q6JVE6 187 aa12.66□□□□□ -0.38
SHROOM1-203ENST00000378679 ST8SIA4Q92187 359 aa12.66□□□□□ -0.38
SHROOM1-203ENST00000378679 A0A0A6YYJ9 748 aa12.66□□□□□ -0.38
SHROOM1-203ENST00000378679 F8W036 122 aa12.66□□□□□ -0.38
SHROOM1-203ENST00000378679 MASP2O00187 686 aa12.66□□□□□ -0.38
SHROOM1-203ENST00000378679 PRRG2O14669 202 aa12.66□□□□□ -0.38
SHROOM1-203ENST00000378679 CNR1P21554 472 aa12.66□□□□□ -0.38
SHROOM1-203ENST00000378679 BLOC1S1P78537 153 aa12.66□□□□□ -0.38
SHROOM1-203ENST00000378679 FGL1Q08830 312 aa12.66□□□□□ -0.38
SHROOM1-203ENST00000378679 DEGS2Q6QHC5 323 aa12.66□□□□□ -0.38
SHROOM1-203ENST00000378679 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.66□□□□□ -0.38
SHROOM1-203ENST00000378679 STX12Q86Y82 276 aa12.66□□□□□ -0.38
SHROOM1-203ENST00000378679 CMTM1Q8IZ96 169 aa12.66□□□□□ -0.38
SHROOM1-203ENST00000378679 RRNAD1Q96FB5 475 aaKnown RBP12.66□□□□□ -0.38
SHROOM1-203ENST00000378679 NICN1Q9BSH3 213 aa12.66□□□□□ -0.38
SHROOM1-203ENST00000378679 ZNF416Q9BWM5 594 aa12.66□□□□□ -0.38
SHROOM1-203ENST00000378679 NELFAQ9H3P2 528 aa12.66□□□□□ -0.38
SHROOM1-203ENST00000378679 TRAPPC4Q9Y296 219 aa12.66□□□□□ -0.38
SHROOM1-203ENST00000378679 BPNT1O95861 308 aa12.66□□□□□ -0.38
SHROOM1-203ENST00000378679 NGFRP08138 427 aa12.66□□□□□ -0.38
SHROOM1-203ENST00000378679 PATE4P0C8F1 98 aa12.66□□□□□ -0.38
SHROOM1-203ENST00000378679 GAAP10253 952 aa12.66□□□□□ -0.38
SHROOM1-203ENST00000378679 TAS2R31P59538 309 aa12.66□□□□□ -0.38
SHROOM1-203ENST00000378679 SORDQ00796 357 aa12.66□□□□□ -0.38
SHROOM1-203ENST00000378679 CAMK2BQ13554 666 aa12.66□□□□□ -0.38
SHROOM1-203ENST00000378679 RELL2Q8NC24 303 aaPredicted RBP12.66□□□□□ -0.38
SHROOM1-203ENST00000378679 ZPLD1Q8TCW7 415 aa12.66□□□□□ -0.38
SHROOM1-203ENST00000378679 SEC22AQ96IW7 307 aa12.66□□□□□ -0.38
SHROOM1-203ENST00000378679 GUCD1Q96NT3 240 aa12.66□□□□□ -0.38
SHROOM1-203ENST00000378679 UCN2Q96RP3 112 aa12.66□□□□□ -0.38
SHROOM1-203ENST00000378679 POLEQ07864 2286 aa12.66□□□□□ -0.38
SHROOM1-203ENST00000378679 BET1O15155 118 aa12.66□□□□□ -0.38
SHROOM1-203ENST00000378679 GDF9O60383 454 aa12.66□□□□□ -0.38
SHROOM1-203ENST00000378679 TK1P04183 234 aa12.66□□□□□ -0.38
SHROOM1-203ENST00000378679 EDN3P14138 238 aa12.66□□□□□ -0.38
SHROOM1-203ENST00000378679 PPA1Q15181 289 aa12.66□□□□□ -0.38
SHROOM1-203ENST00000378679 DMKNQ6E0U4 476 aaPredicted RBP12.66□□□□□ -0.38
SHROOM1-203ENST00000378679 MEX3BQ6ZN04 569 aaKnown RBP12.66□□□□□ -0.38
SHROOM1-203ENST00000378679 ZNF574Q6ZN55 896 aaPredicted RBP12.66□□□□□ -0.38
SHROOM1-203ENST00000378679 EXD3Q8N9H8 876 aa12.66□□□□□ -0.38
SHROOM1-203ENST00000378679 OR51S1Q8NGJ8 323 aa12.66□□□□□ -0.38
SHROOM1-203ENST00000378679 FNDC9Q8TBE3 224 aa12.66□□□□□ -0.38
SHROOM1-203ENST00000378679 ZNF286AQ9HBT8 521 aa12.66□□□□□ -0.38
SHROOM1-203ENST00000378679 CYSLTR2Q9NS75 346 aa12.66□□□□□ -0.38
SHROOM1-203ENST00000378679 SPTBN1Q01082 2364 aaKnown RBP12.65□□□□□ -0.38
SHROOM1-203ENST00000378679 EPPINO95925 133 aa12.65□□□□□ -0.38
SHROOM1-203ENST00000378679 CBR1P16152 277 aa12.65□□□□□ -0.38
SHROOM1-203ENST00000378679 RPS4Y1P22090 263 aaKnown RBP12.65□□□□□ -0.38
SHROOM1-203ENST00000378679 TAS2R46P59540 309 aa12.65□□□□□ -0.38
SHROOM1-203ENST00000378679 ARF1P84077 181 aaKnown RBP12.65□□□□□ -0.38
SHROOM1-203ENST00000378679 LAIR2Q6ISS4 152 aa12.65□□□□□ -0.38
SHROOM1-203ENST00000378679 TRILQ7L0X0 811 aa12.65□□□□□ -0.38
SHROOM1-203ENST00000378679 ZFP82Q8N141 532 aa12.65□□□□□ -0.38
SHROOM1-203ENST00000378679 OR6X1Q8NH79 312 aa12.65□□□□□ -0.38
SHROOM1-203ENST00000378679 KCNJ15Q99712 375 aa12.65□□□□□ -0.38
SHROOM1-203ENST00000378679 FIGNL2A6NMB9 653 aa12.65□□□□□ -0.38
SHROOM1-203ENST00000378679 SLC17A2O00624 439 aa12.65□□□□□ -0.38
SHROOM1-203ENST00000378679 GALP22466 123 aa12.65□□□□□ -0.38
SHROOM1-203ENST00000378679 MLF1P58340 268 aa12.65□□□□□ -0.38
SHROOM1-203ENST00000378679 ZNF169Q14929 603 aaPredicted RBP12.65□□□□□ -0.38
SHROOM1-203ENST00000378679 CCDC71LQ8N9Z2 235 aa12.65□□□□□ -0.38
SHROOM1-203ENST00000378679 ZNF700Q9H0M5 742 aa12.65□□□□□ -0.38
SHROOM1-203ENST00000378679 ANAPC1Q9H1A4 1944 aa12.65□□□□□ -0.38
SHROOM1-203ENST00000378679 OR5H15A6NDH6 313 aa12.65□□□□□ -0.39
SHROOM1-203ENST00000378679 OR6C6A6NF89 314 aa12.65□□□□□ -0.39
SHROOM1-203ENST00000378679 ZNF891A8MT65 544 aaPredicted RBP12.65□□□□□ -0.39
SHROOM1-203ENST00000378679 SEMA7AO75326 666 aa12.65□□□□□ -0.39
SHROOM1-203ENST00000378679 NRASP01111 189 aa12.65□□□□□ -0.39
SHROOM1-203ENST00000378679 HOXB5P09067 269 aa12.65□□□□□ -0.39
SHROOM1-203ENST00000378679 CYCSP99999 105 aaKnown RBP12.65□□□□□ -0.39
SHROOM1-203ENST00000378679 TAGLNQ01995 201 aaKnown RBP12.65□□□□□ -0.39
SHROOM1-203ENST00000378679 TGIF1Q15583 401 aa12.65□□□□□ -0.39
SHROOM1-203ENST00000378679 SLC9A3R2Q15599 337 aa12.65□□□□□ -0.39
SHROOM1-203ENST00000378679 TAF9Q16594 264 aa12.65□□□□□ -0.39
SHROOM1-203ENST00000378679 KRBOX4Q5JUW0 171 aa12.65□□□□□ -0.39
SHROOM1-203ENST00000378679 TMEM88Q6PEY1 159 aa12.65□□□□□ -0.39
SHROOM1-203ENST00000378679 REEP6Q96HR9 211 aa12.65□□□□□ -0.39
SHROOM1-203ENST00000378679 GSX2Q9BZM3 304 aa12.65□□□□□ -0.39
SHROOM1-203ENST00000378679 TXNL1O43396 289 aa12.64□□□□□ -0.39
SHROOM1-203ENST00000378679 NXPH2O95156 264 aa12.64□□□□□ -0.39
SHROOM1-203ENST00000378679 GRPP07492 148 aa12.64□□□□□ -0.39
SHROOM1-203ENST00000378679 RD3LP0DJH9 198 aa12.64□□□□□ -0.39
SHROOM1-203ENST00000378679 PTHLHP12272 177 aa12.64□□□□□ -0.39
SHROOM1-203ENST00000378679 TNFSF4P23510 183 aa12.64□□□□□ -0.39
SHROOM1-203ENST00000378679 USF2Q15853 346 aaPredicted RBP12.64□□□□□ -0.39
SHROOM1-203ENST00000378679 TMEM105Q8N8V8 129 aa12.64□□□□□ -0.39
SHROOM1-203ENST00000378679 C2CD4CQ8TF44 421 aa12.64□□□□□ -0.39
SHROOM1-203ENST00000378679 ZNF436Q9C0F3 470 aaPredicted RBP12.64□□□□□ -0.39
SHROOM1-203ENST00000378679 ERVH48-1M5A8F1 160 aa12.64□□□□□ -0.39
SHROOM1-203ENST00000378679 FADS1O60427 444 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms