RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 AP4S1Q9Y587 144 aa14.15□□□□□ -0.14
HMGN4-201ENST00000377575 PPIAL4EA0A075B759 164 aa14.14□□□□□ -0.15
HMGN4-201ENST00000377575 PPIAL4CA0A0B4J2A2 164 aa14.14□□□□□ -0.15
HMGN4-201ENST00000377575 IGHV3-64DA0A0J9YX35 117 aa14.14□□□□□ -0.15
HMGN4-201ENST00000377575 PPIAL4DF5H284 164 aa14.14□□□□□ -0.15
HMGN4-201ENST00000377575 G3V2T6 193 aa14.14□□□□□ -0.15
HMGN4-201ENST00000377575 TCF21O43680 179 aa14.14□□□□□ -0.15
HMGN4-201ENST00000377575 SELENOFO60613 162 aa14.14□□□□□ -0.15
HMGN4-201ENST00000377575 CYB5R3P00387 301 aaPredicted RBP14.14□□□□□ -0.15
HMGN4-201ENST00000377575 PPIAL4FP0DN26 164 aa14.14□□□□□ -0.15
HMGN4-201ENST00000377575 CFL1P23528 166 aaKnown RBP14.14□□□□□ -0.15
HMGN4-201ENST00000377575 CPT2P23786 658 aa14.14□□□□□ -0.15
HMGN4-201ENST00000377575 DAPP51397 102 aa14.14□□□□□ -0.15
HMGN4-201ENST00000377575 ZNF121P58317 390 aaPredicted RBP14.14□□□□□ -0.15
HMGN4-201ENST00000377575 ESRRGP62508 458 aa14.14□□□□□ -0.15
HMGN4-201ENST00000377575 MZT1Q08AG7 82 aa14.14□□□□□ -0.15
HMGN4-201ENST00000377575 MAB21L1Q13394 359 aa14.14□□□□□ -0.15
HMGN4-201ENST00000377575 ESCO2Q56NI9 601 aa14.14□□□□□ -0.15
HMGN4-201ENST00000377575 LCN1P1Q5VSP4 162 aa14.14□□□□□ -0.15
HMGN4-201ENST00000377575 LIPNQ5VXI9 398 aa14.14□□□□□ -0.15
HMGN4-201ENST00000377575 TMEM236Q5W0B7 351 aa14.14□□□□□ -0.15
HMGN4-201ENST00000377575 KLBQ86Z14 1044 aa14.14□□□□□ -0.15
HMGN4-201ENST00000377575 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.14□□□□□ -0.15
HMGN4-201ENST00000377575 ZDHHC13Q8IUH4 622 aa14.14□□□□□ -0.15
HMGN4-201ENST00000377575 OR56B2PQ8NGI1 322 aa14.14□□□□□ -0.15
HMGN4-201ENST00000377575 Q8TCH9 128 aa14.14□□□□□ -0.15
HMGN4-201ENST00000377575 REEP6Q96HR9 211 aa14.14□□□□□ -0.15
HMGN4-201ENST00000377575 OR10A2Q9H208 303 aa14.14□□□□□ -0.15
HMGN4-201ENST00000377575 TVP23BQ9NYZ1 205 aa14.14□□□□□ -0.15
HMGN4-201ENST00000377575 DNAJC27Q9NZQ0 273 aa14.14□□□□□ -0.15
HMGN4-201ENST00000377575 ENOPH1Q9UHY7 261 aa14.14□□□□□ -0.15
HMGN4-201ENST00000377575 DNHD1Q96M86 4753 aa14.14□□□□□ -0.15
HMGN4-201ENST00000377575 ARHGAP32A7KAX9 2087 aa14.13□□□□□ -0.15
HMGN4-201ENST00000377575 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.13□□□□□ -0.15
HMGN4-201ENST00000377575 C5orf63A6NC05 138 aa14.13□□□□□ -0.15
HMGN4-201ENST00000377575 CEACAM18A8MTB9 384 aa14.13□□□□□ -0.15
HMGN4-201ENST00000377575 A8MXK9 166 aa14.13□□□□□ -0.15
HMGN4-201ENST00000377575 F5H0A9 414 aaPredicted RBP14.13□□□□□ -0.15
HMGN4-201ENST00000377575 FSTL3O95633 263 aa14.13□□□□□ -0.15
HMGN4-201ENST00000377575 SLC2A5P22732 501 aa14.13□□□□□ -0.15
HMGN4-201ENST00000377575 ANOS1P23352 680 aa14.13□□□□□ -0.15
HMGN4-201ENST00000377575 RBMXP38159 391 aaKnown RBP14.13□□□□□ -0.15
HMGN4-201ENST00000377575 DDOSTP39656 456 aa14.13□□□□□ -0.15
HMGN4-201ENST00000377575 NAA10P41227 235 aaPredicted RBP14.13□□□□□ -0.15
HMGN4-201ENST00000377575 APOFQ13790 326 aa14.13□□□□□ -0.15
HMGN4-201ENST00000377575 FAM57BQ71RH2 274 aa14.13□□□□□ -0.15
HMGN4-201ENST00000377575 SPERTQ8NA61 448 aa14.13□□□□□ -0.15
HMGN4-201ENST00000377575 BBS1Q8NFJ9 593 aa14.13□□□□□ -0.15
HMGN4-201ENST00000377575 THEM6Q8WUY1 208 aa14.13□□□□□ -0.15
HMGN4-201ENST00000377575 DUS3LQ96G46 650 aaKnown RBP14.13□□□□□ -0.15
HMGN4-201ENST00000377575 AMELYQ99218 206 aa14.13□□□□□ -0.15
HMGN4-201ENST00000377575 TMPRSS13Q9BYE2 586 aa14.13□□□□□ -0.15
HMGN4-201ENST00000377575 GABARAPL1Q9H0R8 117 aa14.13□□□□□ -0.15
HMGN4-201ENST00000377575 FN3KRPQ9HA64 309 aa14.13□□□□□ -0.15
HMGN4-201ENST00000377575 LAMP5Q9UJQ1 280 aa14.13□□□□□ -0.15
HMGN4-201ENST00000377575 LRCH1Q9Y2L9 728 aa14.13□□□□□ -0.15
HMGN4-201ENST00000377575 DOCK11Q5JSL3 2073 aa14.13□□□□□ -0.15
HMGN4-201ENST00000377575 LOC105371242A0A075B767 164 aa14.12□□□□□ -0.15
HMGN4-201ENST00000377575 ANKRD30BLA7E2S9 258 aa14.12□□□□□ -0.15
HMGN4-201ENST00000377575 RPS2P15880 293 aaKnown RBP14.12□□□□□ -0.15
HMGN4-201ENST00000377575 PTGES3Q15185 160 aaKnown RBP14.12□□□□□ -0.15
HMGN4-201ENST00000377575 SNCBQ16143 134 aa14.12□□□□□ -0.15
HMGN4-201ENST00000377575 LCE2DQ5TA82 110 aaPredicted RBP14.12□□□□□ -0.15
HMGN4-201ENST00000377575 PRAMEF6Q5VXH4 476 aa14.12□□□□□ -0.15
HMGN4-201ENST00000377575 SLC16A9Q7RTY1 509 aa14.12□□□□□ -0.15
HMGN4-201ENST00000377575 C1QL2Q7Z5L3 287 aa14.12□□□□□ -0.15
HMGN4-201ENST00000377575 PHC2Q8IXK0 858 aa14.12□□□□□ -0.15
HMGN4-201ENST00000377575 PLPP7Q8NBV4 271 aa14.12□□□□□ -0.15
HMGN4-201ENST00000377575 PGAM5Q96HS1 289 aa14.12□□□□□ -0.15
HMGN4-201ENST00000377575 RGCCQ9H4X1 137 aa14.12□□□□□ -0.15
HMGN4-201ENST00000377575 NIPAL2Q9H841 368 aa14.12□□□□□ -0.15
HMGN4-201ENST00000377575 UFSP2Q9NUQ7 469 aa14.12□□□□□ -0.15
HMGN4-201ENST00000377575 MIOXQ9UGB7 285 aa14.12□□□□□ -0.15
HMGN4-201ENST00000377575 OR5V1Q9UGF6 321 aa14.12□□□□□ -0.15
HMGN4-201ENST00000377575 POLR3KQ9Y2Y1 108 aaPredicted RBP14.12□□□□□ -0.15
HMGN4-201ENST00000377575 PPIAL4AQ9Y536 164 aa14.12□□□□□ -0.15
HMGN4-201ENST00000377575 FAM20BO75063 409 aa14.11□□□□□ -0.15
HMGN4-201ENST00000377575 ZNF205O95201 554 aa14.11□□□□□ -0.15
HMGN4-201ENST00000377575 PTBP3O95758 552 aaKnown RBP14.11□□□□□ -0.15
HMGN4-201ENST00000377575 ZFP36P26651 326 aaKnown RBP14.11□□□□□ -0.15
HMGN4-201ENST00000377575 PSMA6P60900 246 aaKnown RBP14.11□□□□□ -0.15
HMGN4-201ENST00000377575 FAM3AP98173 230 aa14.11□□□□□ -0.15
HMGN4-201ENST00000377575 GFOD2Q3B7J2 385 aa14.11□□□□□ -0.15
HMGN4-201ENST00000377575 ZNF404Q494X3 552 aa14.11□□□□□ -0.15
HMGN4-201ENST00000377575 NLRC3Q7RTR2 1065 aa14.11□□□□□ -0.15
HMGN4-201ENST00000377575 PRSS45Q7RTY3 260 aa14.11□□□□□ -0.15
HMGN4-201ENST00000377575 FTMTQ8N4E7 242 aa14.11□□□□□ -0.15
HMGN4-201ENST00000377575 OR8S1Q8NH09 359 aa14.11□□□□□ -0.15
HMGN4-201ENST00000377575 DVL3Q92997 716 aaPredicted RBP14.11□□□□□ -0.15
HMGN4-201ENST00000377575 SSBP3Q9BWW4 388 aaPredicted RBP14.11□□□□□ -0.15
HMGN4-201ENST00000377575 YIPF3Q9GZM5 350 aa14.11□□□□□ -0.15
HMGN4-201ENST00000377575 C7orf69Q9H7B7 122 aa14.11□□□□□ -0.15
HMGN4-201ENST00000377575 BRD7Q9NPI1 651 aa14.11□□□□□ -0.15
HMGN4-201ENST00000377575 C14orf119Q9NWQ9 140 aa14.11□□□□□ -0.15
HMGN4-201ENST00000377575 hCG_38984A0A1B0GV85 526 aa14.1□□□□□ -0.15
HMGN4-201ENST00000377575 AVPP01185 164 aa14.1□□□□□ -0.15
HMGN4-201ENST00000377575 EPHA1P21709 976 aa14.1□□□□□ -0.15
HMGN4-201ENST00000377575 PMELP40967 661 aa14.1□□□□□ -0.15
HMGN4-201ENST00000377575 SEC61A1P61619 476 aaKnown RBP14.1□□□□□ -0.15
HMGN4-201ENST00000377575 MPPED2Q15777 294 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms