RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 FOXRED1Q96CU9 486 aaPredicted RBP11.46□□□□□ -0.57
USP11-204ENST00000377107 PARP12Q9H0J9 701 aaKnown RBP11.46□□□□□ -0.57
USP11-204ENST00000377107 SLC6A15Q9H2J7 730 aa11.46□□□□□ -0.57
USP11-204ENST00000377107 CHMP1AQ9HD42 196 aaPredicted RBP11.46□□□□□ -0.57
USP11-204ENST00000377107 ALKBH4Q9NXW9 302 aa11.46□□□□□ -0.57
USP11-204ENST00000377107 B3GALT5Q9Y2C3 310 aa11.46□□□□□ -0.57
USP11-204ENST00000377107 FAM230AA0A1W2PPH8 454 aa11.46□□□□□ -0.58
USP11-204ENST00000377107 HMSDA8MTL9 139 aa11.46□□□□□ -0.58
USP11-204ENST00000377107 D6RAR5 112 aa11.46□□□□□ -0.58
USP11-204ENST00000377107 TO15178 435 aa11.46□□□□□ -0.58
USP11-204ENST00000377107 TLX3O43711 291 aaPredicted RBP11.46□□□□□ -0.58
USP11-204ENST00000377107 SPINK2P20155 84 aa11.46□□□□□ -0.58
USP11-204ENST00000377107 CSRP1P21291 193 aaKnown RBP11.46□□□□□ -0.58
USP11-204ENST00000377107 C11orf87Q6NUJ2 197 aa11.46□□□□□ -0.58
USP11-204ENST00000377107 LYG2Q86SG7 212 aa11.46□□□□□ -0.58
USP11-204ENST00000377107 PAQR4Q8N4S7 273 aaPredicted RBP11.46□□□□□ -0.58
USP11-204ENST00000377107 OR10S1Q8NGN2 331 aa11.46□□□□□ -0.58
USP11-204ENST00000377107 ELP5Q8TE02 316 aa11.46□□□□□ -0.58
USP11-204ENST00000377107 UCN2Q96RP3 112 aa11.46□□□□□ -0.58
USP11-204ENST00000377107 SCPEP1Q9HB40 452 aa11.46□□□□□ -0.58
USP11-204ENST00000377107 EHFQ9NZC4 300 aa11.46□□□□□ -0.58
USP11-204ENST00000377107 LHFPL6Q9Y693 200 aa11.46□□□□□ -0.58
USP11-204ENST00000377107 C9orf170A2RU37 121 aa11.46□□□□□ -0.58
USP11-204ENST00000377107 OR6C76A6NM76 312 aa11.46□□□□□ -0.58
USP11-204ENST00000377107 NPIPA2E9PIF3 369 aa11.46□□□□□ -0.58
USP11-204ENST00000377107 NPIPA3F8WFD2 350 aa11.46□□□□□ -0.58
USP11-204ENST00000377107 SIGLEC6O43699 453 aa11.46□□□□□ -0.58
USP11-204ENST00000377107 TMEM225BP0DP42 221 aa11.46□□□□□ -0.58
USP11-204ENST00000377107 MC2RQ01718 297 aa11.46□□□□□ -0.58
USP11-204ENST00000377107 RHBDD2Q6NTF9 364 aa11.46□□□□□ -0.58
USP11-204ENST00000377107 FDX2Q6P4F2 183 aa11.46□□□□□ -0.58
USP11-204ENST00000377107 TMEM88Q6PEY1 159 aa11.46□□□□□ -0.58
USP11-204ENST00000377107 ZNF813Q6ZN06 617 aa11.46□□□□□ -0.58
USP11-204ENST00000377107 PNLDC1Q8NA58 520 aaKnown RBP11.46□□□□□ -0.58
USP11-204ENST00000377107 OR5M8Q8NGP6 311 aa11.46□□□□□ -0.58
USP11-204ENST00000377107 TMED6Q8WW62 240 aa11.46□□□□□ -0.58
USP11-204ENST00000377107 TOMM40LQ969M1 308 aa11.46□□□□□ -0.58
USP11-204ENST00000377107 SMIM3Q9BZL3 60 aa11.46□□□□□ -0.58
USP11-204ENST00000377107 UCK1Q9HA47 277 aa11.46□□□□□ -0.58
USP11-204ENST00000377107 TREM1Q9NP99 234 aa11.46□□□□□ -0.58
USP11-204ENST00000377107 FAM206AQ9NX38 181 aa11.46□□□□□ -0.58
USP11-204ENST00000377107 WIF1Q9Y5W5 379 aa11.46□□□□□ -0.58
USP11-204ENST00000377107 HSPB2A8KAH6 182 aa11.45□□□□□ -0.58
USP11-204ENST00000377107 ATP6V1G2-DDX39BF2Z307 99 aa11.45□□□□□ -0.58
USP11-204ENST00000377107 ANGPTL7O43827 346 aa11.45□□□□□ -0.58
USP11-204ENST00000377107 TRAPPC6AO75865 159 aa11.45□□□□□ -0.58
USP11-204ENST00000377107 IGHV3-9P01782 118 aa11.45□□□□□ -0.58
USP11-204ENST00000377107 PNLIPP16233 465 aa11.45□□□□□ -0.58
USP11-204ENST00000377107 GPR85P60893 370 aa11.45□□□□□ -0.58
USP11-204ENST00000377107 FGL1Q08830 312 aa11.45□□□□□ -0.58
USP11-204ENST00000377107 HSPB2Q16082 182 aa11.45□□□□□ -0.58
USP11-204ENST00000377107 ZNF260Q3ZCT1 412 aa11.45□□□□□ -0.58
USP11-204ENST00000377107 MISPQ8IVT2 679 aa11.45□□□□□ -0.58
USP11-204ENST00000377107 C20orf196Q8IYI0 205 aa11.45□□□□□ -0.58
USP11-204ENST00000377107 OR5M9Q8NGP3 310 aa11.45□□□□□ -0.58
USP11-204ENST00000377107 OR1S1Q8NH92 325 aa11.45□□□□□ -0.58
USP11-204ENST00000377107 SLC22A8Q8TCC7 542 aa11.45□□□□□ -0.58
USP11-204ENST00000377107 CCDC74BQ96LY2 380 aa11.45□□□□□ -0.58
USP11-204ENST00000377107 ZNF416Q9BWM5 594 aa11.45□□□□□ -0.58
USP11-204ENST00000377107 MFSD2BA6NFX1 497 aa11.45□□□□□ -0.58
USP11-204ENST00000377107 IGFBP3P17936 291 aaPredicted RBP11.45□□□□□ -0.58
USP11-204ENST00000377107 SCRN3Q0VDG4 424 aa11.45□□□□□ -0.58
USP11-204ENST00000377107 AIMP2Q13155 320 aaKnown RBP11.45□□□□□ -0.58
USP11-204ENST00000377107 SMAD4Q13485 552 aaKnown RBP11.45□□□□□ -0.58
USP11-204ENST00000377107 TMEM71Q6P5X7 295 aa11.45□□□□□ -0.58
USP11-204ENST00000377107 TMEM17Q86X19 198 aa11.45□□□□□ -0.58
USP11-204ENST00000377107 PLPP5Q8NEB5 264 aa11.45□□□□□ -0.58
USP11-204ENST00000377107 OR2AE1Q8NHA4 323 aa11.45□□□□□ -0.58
USP11-204ENST00000377107 ADAT1Q9BUB4 502 aaKnown RBP11.45□□□□□ -0.58
USP11-204ENST00000377107 CYB5R1Q9UHQ9 305 aa11.45□□□□□ -0.58
USP11-204ENST00000377107 H3BMH7 237 aa11.44□□□□□ -0.58
USP11-204ENST00000377107 H3BUI4 141 aa11.44□□□□□ -0.58
USP11-204ENST00000377107 CCNOP22674 350 aa11.44□□□□□ -0.58
USP11-204ENST00000377107 CSNK1A1P48729 337 aa11.44□□□□□ -0.58
USP11-204ENST00000377107 MMP16P51512 607 aa11.44□□□□□ -0.58
USP11-204ENST00000377107 MICBQ29980 383 aa11.44□□□□□ -0.58
USP11-204ENST00000377107 C9orf135Q5VTT2 229 aa11.44□□□□□ -0.58
USP11-204ENST00000377107 FAM166AQ6J272 317 aa11.44□□□□□ -0.58
USP11-204ENST00000377107 GTPBP8Q8N3Z3 284 aaPredicted RBP11.44□□□□□ -0.58
USP11-204ENST00000377107 CADM4Q8NFZ8 388 aa11.44□□□□□ -0.58
USP11-204ENST00000377107 RASL10BQ96S79 203 aa11.44□□□□□ -0.58
USP11-204ENST00000377107 TMPRSS13Q9BYE2 586 aa11.44□□□□□ -0.58
USP11-204ENST00000377107 SLCO5A1Q9H2Y9 848 aa11.44□□□□□ -0.58
USP11-204ENST00000377107 SLC17A5Q9NRA2 495 aa11.44□□□□□ -0.58
USP11-204ENST00000377107 DKKL1Q9UK85 242 aa11.44□□□□□ -0.58
USP11-204ENST00000377107 A0A1B0GV50 99 aa11.44□□□□□ -0.58
USP11-204ENST00000377107 A0A1W2PQM1 296 aa11.44□□□□□ -0.58
USP11-204ENST00000377107 WIPF3A6NGB9 483 aa11.44□□□□□ -0.58
USP11-204ENST00000377107 MPTX1A8MV57 137 aa11.44□□□□□ -0.58
USP11-204ENST00000377107 ZNF735P0CB33 412 aa11.44□□□□□ -0.58
USP11-204ENST00000377107 GLRA1P23415 457 aa11.44□□□□□ -0.58
USP11-204ENST00000377107 AKR1D1P51857 326 aa11.44□□□□□ -0.58
USP11-204ENST00000377107 SCAND1P57086 179 aa11.44□□□□□ -0.58
USP11-204ENST00000377107 FXYD4P59646 89 aa11.44□□□□□ -0.58
USP11-204ENST00000377107 CHRFAM7AQ494W8 412 aa11.44□□□□□ -0.58
USP11-204ENST00000377107 THEM4Q5T1C6 240 aa11.44□□□□□ -0.58
USP11-204ENST00000377107 OR2W3Q7Z3T1 314 aa11.44□□□□□ -0.58
USP11-204ENST00000377107 NOXO1Q8NFA2 376 aa11.44□□□□□ -0.58
USP11-204ENST00000377107 LRRC46Q96FV0 321 aa11.44□□□□□ -0.58
USP11-204ENST00000377107 TSNAXQ99598 290 aaKnown RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms