RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 MOGAT1Q96PD6 335 aa10.9□□□□□ -0.66
VRK3-202ENST00000377011 INTS14Q96SY0 518 aa10.9□□□□□ -0.66
VRK3-202ENST00000377011 TMPRSS13Q9BYE2 586 aa10.9□□□□□ -0.66
VRK3-202ENST00000377011 PTGES2Q9H7Z7 377 aa10.9□□□□□ -0.66
VRK3-202ENST00000377011 STEAP1Q9UHE8 339 aa10.9□□□□□ -0.66
VRK3-202ENST00000377011 KIF25Q9UIL4 384 aa10.9□□□□□ -0.66
VRK3-202ENST00000377011 VPS13CQ709C8 3753 aa10.9□□□□□ -0.66
VRK3-202ENST00000377011 PRR14LQ5THK1 2151 aa10.9□□□□□ -0.66
VRK3-202ENST00000377011 CELSR1Q9NYQ6 3014 aa10.9□□□□□ -0.66
VRK3-202ENST00000377011 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.89□□□□□ -0.67
VRK3-202ENST00000377011 ANXA2P2A6NMY6 339 aa10.89□□□□□ -0.67
VRK3-202ENST00000377011 XRCC3O43542 346 aa10.89□□□□□ -0.67
VRK3-202ENST00000377011 GMDSO60547 372 aa10.89□□□□□ -0.67
VRK3-202ENST00000377011 SERPINI2O75830 405 aa10.89□□□□□ -0.67
VRK3-202ENST00000377011 TNFSF13O75888 250 aa10.89□□□□□ -0.67
VRK3-202ENST00000377011 ANXA2P07355 339 aaKnown RBP10.89□□□□□ -0.67
VRK3-202ENST00000377011 MSX1P28360 303 aa10.89□□□□□ -0.67
VRK3-202ENST00000377011 TIMP3P35625 211 aa10.89□□□□□ -0.67
VRK3-202ENST00000377011 ZNF81P51508 661 aa10.89□□□□□ -0.67
VRK3-202ENST00000377011 RAP2BP61225 183 aa10.89□□□□□ -0.67
VRK3-202ENST00000377011 PUDPQ08623 228 aa10.89□□□□□ -0.67
VRK3-202ENST00000377011 MESTQ5EB52 335 aa10.89□□□□□ -0.67
VRK3-202ENST00000377011 IZUMO1Q8IYV9 350 aa10.89□□□□□ -0.67
VRK3-202ENST00000377011 SPERTQ8NA61 448 aa10.89□□□□□ -0.67
VRK3-202ENST00000377011 LRRC20Q8TCA0 184 aa10.89□□□□□ -0.67
VRK3-202ENST00000377011 ASB5Q8WWX0 329 aa10.89□□□□□ -0.67
VRK3-202ENST00000377011 DACT3Q96B18 629 aaPredicted RBP10.89□□□□□ -0.67
VRK3-202ENST00000377011 TSPAN32Q96QS1 320 aa10.89□□□□□ -0.67
VRK3-202ENST00000377011 CALHM2Q9HA72 323 aa10.89□□□□□ -0.67
VRK3-202ENST00000377011 KLHDC2Q9Y2U9 406 aa10.89□□□□□ -0.67
VRK3-202ENST00000377011 FREM1Q5H8C1 2179 aa10.89□□□□□ -0.67
VRK3-202ENST00000377011 TRAV36DV7A0A075B6V5 113 aa10.89□□□□□ -0.67
VRK3-202ENST00000377011 RPS10-NUDT3A0A1W2PQS6 291 aa10.89□□□□□ -0.67
VRK3-202ENST00000377011 EIF1AYO14602 144 aaKnown RBP10.89□□□□□ -0.67
VRK3-202ENST00000377011 TNFSF11O14788 317 aa10.89□□□□□ -0.67
VRK3-202ENST00000377011 CREBL2O60519 120 aaPredicted RBP10.89□□□□□ -0.67
VRK3-202ENST00000377011 HPXP02790 462 aa10.89□□□□□ -0.67
VRK3-202ENST00000377011 BGLAPP02818 100 aa10.89□□□□□ -0.67
VRK3-202ENST00000377011 CSF1P09603 554 aa10.89□□□□□ -0.67
VRK3-202ENST00000377011 RRASP10301 218 aa10.89□□□□□ -0.67
VRK3-202ENST00000377011 ADRA2CP18825 462 aa10.89□□□□□ -0.67
VRK3-202ENST00000377011 CDK2P24941 298 aa10.89□□□□□ -0.67
VRK3-202ENST00000377011 SFTPDP35247 375 aa10.89□□□□□ -0.67
VRK3-202ENST00000377011 CCR4P51679 360 aa10.89□□□□□ -0.67
VRK3-202ENST00000377011 LTBQ06643 244 aa10.89□□□□□ -0.67
VRK3-202ENST00000377011 EXOSC2Q13868 293 aaKnown RBP10.89□□□□□ -0.67
VRK3-202ENST00000377011 ZNF626Q68DY1 528 aa10.89□□□□□ -0.67
VRK3-202ENST00000377011 VWA1Q6PCB0 445 aa10.89□□□□□ -0.67
VRK3-202ENST00000377011 C5orf46Q6UWT4 87 aa10.89□□□□□ -0.67
VRK3-202ENST00000377011 NLRC3Q7RTR2 1065 aa10.89□□□□□ -0.67
VRK3-202ENST00000377011 OR2T35Q8NGX2 323 aa10.89□□□□□ -0.67
VRK3-202ENST00000377011 MCHR2Q969V1 340 aa10.89□□□□□ -0.67
VRK3-202ENST00000377011 C4orf45Q96LM5 186 aa10.89□□□□□ -0.67
VRK3-202ENST00000377011 PIGQQ9BRB3 760 aa10.89□□□□□ -0.67
VRK3-202ENST00000377011 DPCDQ9BVM2 203 aaPredicted RBP10.89□□□□□ -0.67
VRK3-202ENST00000377011 SRXN1Q9BYN0 137 aa10.89□□□□□ -0.67
VRK3-202ENST00000377011 GSX2Q9BZM3 304 aa10.89□□□□□ -0.67
VRK3-202ENST00000377011 NOX3Q9HBY0 568 aa10.89□□□□□ -0.67
VRK3-202ENST00000377011 MED9Q9NWA0 146 aa10.89□□□□□ -0.67
VRK3-202ENST00000377011 SPEF1Q9Y4P9 236 aa10.89□□□□□ -0.67
VRK3-202ENST00000377011 LOC105371267A0A1B0GV96 52 aa10.88□□□□□ -0.67
VRK3-202ENST00000377011 H7C417 338 aa10.88□□□□□ -0.67
VRK3-202ENST00000377011 M0R233 179 aa10.88□□□□□ -0.67
VRK3-202ENST00000377011 CXCL13O43927 109 aa10.88□□□□□ -0.67
VRK3-202ENST00000377011 OR2A4O95047 310 aa10.88□□□□□ -0.67
VRK3-202ENST00000377011 NUDT14O95848 222 aa10.88□□□□□ -0.67
VRK3-202ENST00000377011 IGHMP01871 453 aa10.88□□□□□ -0.67
VRK3-202ENST00000377011 HOXD4P09016 255 aaPredicted RBP10.88□□□□□ -0.67
VRK3-202ENST00000377011 TMIGD3P0DMS9 266 aaPredicted RBP10.88□□□□□ -0.67
VRK3-202ENST00000377011 TACR3P29371 465 aa10.88□□□□□ -0.67
VRK3-202ENST00000377011 GRPRP30550 384 aa10.88□□□□□ -0.67
VRK3-202ENST00000377011 PTGER4P35408 488 aa10.88□□□□□ -0.67
VRK3-202ENST00000377011 VEGFCP49767 419 aa10.88□□□□□ -0.67
VRK3-202ENST00000377011 SFRP4Q6FHJ7 346 aaPredicted RBP10.88□□□□□ -0.67
VRK3-202ENST00000377011 ANKRD16Q6P6B7 361 aa10.88□□□□□ -0.67
VRK3-202ENST00000377011 MEX3BQ6ZN04 569 aaKnown RBP10.88□□□□□ -0.67
VRK3-202ENST00000377011 COMMD7Q86VX2 200 aa10.88□□□□□ -0.67
VRK3-202ENST00000377011 ADGRG3Q86Y34 549 aa10.88□□□□□ -0.67
VRK3-202ENST00000377011 GLB1L2Q8IW92 636 aa10.88□□□□□ -0.67
VRK3-202ENST00000377011 MCEMP1Q8IX19 187 aa10.88□□□□□ -0.67
VRK3-202ENST00000377011 ZNF676Q8N7Q3 588 aa10.88□□□□□ -0.67
VRK3-202ENST00000377011 DNAAF1Q8NEP3 725 aa10.88□□□□□ -0.67
VRK3-202ENST00000377011 OR10D3Q8NH80 312 aa10.88□□□□□ -0.67
VRK3-202ENST00000377011 OTOSQ8NHW6 89 aa10.88□□□□□ -0.67
VRK3-202ENST00000377011 ZNF563Q8TA94 476 aa10.88□□□□□ -0.67
VRK3-202ENST00000377011 THEM6Q8WUY1 208 aa10.88□□□□□ -0.67
VRK3-202ENST00000377011 OR2A7Q96R45 310 aa10.88□□□□□ -0.67
VRK3-202ENST00000377011 OR8B4Q96RC9 309 aa10.88□□□□□ -0.67
VRK3-202ENST00000377011 UCN2Q96RP3 112 aa10.88□□□□□ -0.67
VRK3-202ENST00000377011 KCNJ16Q9NPI9 418 aa10.88□□□□□ -0.67
VRK3-202ENST00000377011 MTFP1Q9UDX5 166 aa10.88□□□□□ -0.67
VRK3-202ENST00000377011 IKZF2Q9UKS7 526 aa10.88□□□□□ -0.67
VRK3-202ENST00000377011 CCDC168Q8NDH2 2452 aa10.88□□□□□ -0.67
VRK3-202ENST00000377011 ABCA4P78363 2273 aa10.87□□□□□ -0.67
VRK3-202ENST00000377011 A0A1W2PNR3 127 aa10.87□□□□□ -0.67
VRK3-202ENST00000377011 G3V3Q6 166 aa10.87□□□□□ -0.67
VRK3-202ENST00000377011 ARPC1BO15143 372 aaKnown RBP10.87□□□□□ -0.67
VRK3-202ENST00000377011 BET1O15155 118 aa10.87□□□□□ -0.67
VRK3-202ENST00000377011 RBBP9O75884 186 aa10.87□□□□□ -0.67
VRK3-202ENST00000377011 RGS11O94810 467 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms