RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 H3BML4 177 aa8.45□□□□□ -1.06
TRIM39-202ENST00000376659 NDUFA2O43678 99 aa8.45□□□□□ -1.06
TRIM39-202ENST00000376659 IFNA7P01567 189 aa8.45□□□□□ -1.06
TRIM39-202ENST00000376659 ATXN8OSP0DMR3 200 aa8.45□□□□□ -1.06
TRIM39-202ENST00000376659 HOXB1P14653 301 aaPredicted RBP8.45□□□□□ -1.06
TRIM39-202ENST00000376659 FAUP35544 74 aaKnown RBP8.45□□□□□ -1.06
TRIM39-202ENST00000376659 ARL4DP49703 201 aa8.45□□□□□ -1.06
TRIM39-202ENST00000376659 HOGA1Q86XE5 327 aa8.45□□□□□ -1.06
TRIM39-202ENST00000376659 ZDHHC22Q8N966 263 aa8.45□□□□□ -1.06
TRIM39-202ENST00000376659 PAQR8Q8TEZ7 354 aa8.45□□□□□ -1.06
TRIM39-202ENST00000376659 RELTQ969Z4 430 aa8.45□□□□□ -1.06
TRIM39-202ENST00000376659 OXGR1Q96P68 337 aa8.45□□□□□ -1.06
TRIM39-202ENST00000376659 CHIAQ9BZP6 476 aa8.45□□□□□ -1.06
TRIM39-202ENST00000376659 GPN1Q9HCN4 374 aaPredicted RBP8.45□□□□□ -1.06
TRIM39-202ENST00000376659 FBXO4Q9UKT5 387 aa8.45□□□□□ -1.06
TRIM39-202ENST00000376659 TNFSF18Q9UNG2 199 aa8.45□□□□□ -1.06
TRIM39-202ENST00000376659 ARHGAP21Q5T5U3 1957 aa8.44□□□□□ -1.06
TRIM39-202ENST00000376659 TRBV6-7A0A0A0MS04 114 aa8.44□□□□□ -1.06
TRIM39-202ENST00000376659 TMEM82A0PJX8 343 aa8.44□□□□□ -1.06
TRIM39-202ENST00000376659 M0R233 179 aa8.44□□□□□ -1.06
TRIM39-202ENST00000376659 HPP00738 406 aa8.44□□□□□ -1.06
TRIM39-202ENST00000376659 LIFP15018 202 aa8.44□□□□□ -1.06
TRIM39-202ENST00000376659 S100A11P31949 105 aa8.44□□□□□ -1.06
TRIM39-202ENST00000376659 OR3A4PP47883 348 aa8.44□□□□□ -1.06
TRIM39-202ENST00000376659 CXCL12P48061 93 aa8.44□□□□□ -1.06
TRIM39-202ENST00000376659 EMP2P54851 167 aa8.44□□□□□ -1.06
TRIM39-202ENST00000376659 HGFACQ04756 655 aa8.44□□□□□ -1.06
TRIM39-202ENST00000376659 Q0VFX4 171 aa8.44□□□□□ -1.06
TRIM39-202ENST00000376659 HLA-BQ31612 363 aa8.44□□□□□ -1.06
TRIM39-202ENST00000376659 C17orf107Q6ZR85 190 aa8.44□□□□□ -1.06
TRIM39-202ENST00000376659 SLC22A24Q8N4F4 322 aa8.44□□□□□ -1.06
TRIM39-202ENST00000376659 MITD1Q8WV92 249 aa8.44□□□□□ -1.06
TRIM39-202ENST00000376659 SHDQ96IW2 340 aa8.44□□□□□ -1.06
TRIM39-202ENST00000376659 SAV1Q9H4B6 383 aaPredicted RBP8.44□□□□□ -1.06
TRIM39-202ENST00000376659 PPP4R1LQ9P1A2 415 aa8.44□□□□□ -1.06
TRIM39-202ENST00000376659 HDGFL3Q9Y3E1 203 aa8.44□□□□□ -1.06
TRIM39-202ENST00000376659 PCDHGA1Q9Y5H4 931 aa8.44□□□□□ -1.06
TRIM39-202ENST00000376659 HS3ST3B1Q9Y662 390 aa8.44□□□□□ -1.06
TRIM39-202ENST00000376659 DCDC2BA2VCK2 349 aa8.44□□□□□ -1.06
TRIM39-202ENST00000376659 D6RAR5 112 aa8.44□□□□□ -1.06
TRIM39-202ENST00000376659 CDC14BO60729 498 aa8.44□□□□□ -1.06
TRIM39-202ENST00000376659 TSC22D2O75157 780 aa8.44□□□□□ -1.06
TRIM39-202ENST00000376659 SNAPC5O75971 98 aa8.44□□□□□ -1.06
TRIM39-202ENST00000376659 ZFAND5O76080 213 aa8.44□□□□□ -1.06
TRIM39-202ENST00000376659 PRF1P14222 555 aa8.44□□□□□ -1.06
TRIM39-202ENST00000376659 CRYGSP22914 178 aa8.44□□□□□ -1.06
TRIM39-202ENST00000376659 RPL35P42766 123 aaKnown RBP8.44□□□□□ -1.06
TRIM39-202ENST00000376659 SUPT4H1P63272 117 aaKnown RBP8.44□□□□□ -1.06
TRIM39-202ENST00000376659 Q3ZCU0 254 aa8.44□□□□□ -1.06
TRIM39-202ENST00000376659 H3F3CQ6NXT2 135 aa8.44□□□□□ -1.06
TRIM39-202ENST00000376659 FAHD2BQ6P2I3 314 aaPredicted RBP8.44□□□□□ -1.06
TRIM39-202ENST00000376659 GGNQ86UU5 652 aa8.44□□□□□ -1.06
TRIM39-202ENST00000376659 ACBD4Q8NC06 268 aa8.44□□□□□ -1.06
TRIM39-202ENST00000376659 ADAD2Q8NCV1 583 aaKnown RBP8.44□□□□□ -1.06
TRIM39-202ENST00000376659 OR51E1Q8TCB6 317 aa8.44□□□□□ -1.06
TRIM39-202ENST00000376659 RHBDD1Q8TEB9 315 aa8.44□□□□□ -1.06
TRIM39-202ENST00000376659 FAHD2AQ96GK7 314 aa8.44□□□□□ -1.06
TRIM39-202ENST00000376659 TMEM138Q9NPI0 162 aa8.44□□□□□ -1.06
TRIM39-202ENST00000376659 hCG_1807616A0A1W2PRN6 198 aa8.43□□□□□ -1.06
TRIM39-202ENST00000376659 RER1O15258 196 aa8.43□□□□□ -1.06
TRIM39-202ENST00000376659 NDUFS6O75380 124 aaKnown RBP8.43□□□□□ -1.06
TRIM39-202ENST00000376659 H2BFMP0C1H6 154 aa8.43□□□□□ -1.06
TRIM39-202ENST00000376659 ZP3P21754 424 aa8.43□□□□□ -1.06
TRIM39-202ENST00000376659 IL15RAQ13261 267 aa8.43□□□□□ -1.06
TRIM39-202ENST00000376659 IL11RAQ14626 422 aa8.43□□□□□ -1.06
TRIM39-202ENST00000376659 AADACL3Q5VUY0 350 aa8.43□□□□□ -1.06
TRIM39-202ENST00000376659 NSUN5P2Q63ZY6 315 aa8.43□□□□□ -1.06
TRIM39-202ENST00000376659 OR5L2Q8NGL0 311 aa8.43□□□□□ -1.06
TRIM39-202ENST00000376659 OR10R2Q8NGX6 335 aa8.43□□□□□ -1.06
TRIM39-202ENST00000376659 M1APQ8TC57 530 aa8.43□□□□□ -1.06
TRIM39-202ENST00000376659 SLC25A43Q8WUT9 341 aaPredicted RBP8.43□□□□□ -1.06
TRIM39-202ENST00000376659 ST8SIA4Q92187 359 aa8.43□□□□□ -1.06
TRIM39-202ENST00000376659 ADGRG7Q96K78 797 aa8.43□□□□□ -1.06
TRIM39-202ENST00000376659 OCSTAMPQ9BR26 566 aa8.43□□□□□ -1.06
TRIM39-202ENST00000376659 CST11Q9H112 138 aa8.43□□□□□ -1.06
TRIM39-202ENST00000376659 ZMAT3Q9HA38 289 aaKnown RBP8.43□□□□□ -1.06
TRIM39-202ENST00000376659 CKLFQ9UBR5 152 aa8.43□□□□□ -1.06
TRIM39-202ENST00000376659 CFAP47Q6ZTR5 3102 aa8.43□□□□□ -1.06
TRIM39-202ENST00000376659 EFSO43281 561 aa8.43□□□□□ -1.06
TRIM39-202ENST00000376659 OR6A2O95222 327 aa8.43□□□□□ -1.06
TRIM39-202ENST00000376659 RAB3DO95716 219 aa8.43□□□□□ -1.06
TRIM39-202ENST00000376659 HOXD4P09016 255 aaPredicted RBP8.43□□□□□ -1.06
TRIM39-202ENST00000376659 CCL3P10147 92 aa8.43□□□□□ -1.06
TRIM39-202ENST00000376659 CD96P40200 585 aa8.43□□□□□ -1.06
TRIM39-202ENST00000376659 ZNF41P51814 821 aaPredicted RBP8.43□□□□□ -1.06
TRIM39-202ENST00000376659 LSM6P62312 80 aaKnown RBP8.43□□□□□ -1.06
TRIM39-202ENST00000376659 VAX1Q5SQQ9 334 aa8.43□□□□□ -1.06
TRIM39-202ENST00000376659 LYSMD4Q5XG99 296 aa8.43□□□□□ -1.06
TRIM39-202ENST00000376659 OR52W1Q6IF63 320 aa8.43□□□□□ -1.06
TRIM39-202ENST00000376659 C3P1Q6ZMU1 363 aa8.43□□□□□ -1.06
TRIM39-202ENST00000376659 DTWD2Q8NBA8 298 aa8.43□□□□□ -1.06
TRIM39-202ENST00000376659 HLA-CQ95604 372 aa8.43□□□□□ -1.06
TRIM39-202ENST00000376659 TM2D1Q9BX74 207 aa8.43□□□□□ -1.06
TRIM39-202ENST00000376659 SRXN1Q9BYN0 137 aa8.43□□□□□ -1.06
TRIM39-202ENST00000376659 RARRES3Q9UL19 164 aa8.43□□□□□ -1.06
TRIM39-202ENST00000376659 MAB21L2Q9Y586 359 aa8.43□□□□□ -1.06
TRIM39-202ENST00000376659 A0A087WZY1 265 aa8.43□□□□□ -1.06
TRIM39-202ENST00000376659 A0A0G2JMM0 328 aa8.43□□□□□ -1.06
TRIM39-202ENST00000376659 A0A0U1RQV5 110 aa8.43□□□□□ -1.06
TRIM39-202ENST00000376659 A0A1W2PPB8 328 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms