RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 CATSPERDQ86XM0 798 aa12.82□□□□□ -0.36
HSPG2-201ENST00000374673 ELMOD2Q8IZ81 293 aa12.82□□□□□ -0.36
HSPG2-201ENST00000374673 STX19Q8N4C7 294 aa12.82□□□□□ -0.36
HSPG2-201ENST00000374673 HAVCR2Q8TDQ0 301 aa12.82□□□□□ -0.36
HSPG2-201ENST00000374673 ITFG2Q969R8 447 aa12.82□□□□□ -0.36
HSPG2-201ENST00000374673 RNF166Q96A37 237 aaPredicted RBP12.82□□□□□ -0.36
HSPG2-201ENST00000374673 PELI1Q96FA3 418 aa12.82□□□□□ -0.36
HSPG2-201ENST00000374673 ISG20L2Q9H9L3 353 aaKnown RBP12.82□□□□□ -0.36
HSPG2-201ENST00000374673 CHCHD3Q9NX63 227 aaKnown RBP12.82□□□□□ -0.36
HSPG2-201ENST00000374673 UBAP1Q9NZ09 502 aa12.82□□□□□ -0.36
HSPG2-201ENST00000374673 ABCA12Q86UK0 2595 aa12.82□□□□□ -0.36
HSPG2-201ENST00000374673 FLNBO75369 2602 aaKnown RBP12.82□□□□□ -0.36
HSPG2-201ENST00000374673 C17orf100A8MU93 164 aa12.81□□□□□ -0.36
HSPG2-201ENST00000374673 CDK1P06493 297 aa12.81□□□□□ -0.36
HSPG2-201ENST00000374673 ADH4P08319 380 aa12.81□□□□□ -0.36
HSPG2-201ENST00000374673 NAT2P11245 290 aa12.81□□□□□ -0.36
HSPG2-201ENST00000374673 C21orf33P30042 268 aaPredicted RBP12.81□□□□□ -0.36
HSPG2-201ENST00000374673 PSMB10P40306 273 aa12.81□□□□□ -0.36
HSPG2-201ENST00000374673 PRSS12P56730 875 aa12.81□□□□□ -0.36
HSPG2-201ENST00000374673 GFOD2Q3B7J2 385 aa12.81□□□□□ -0.36
HSPG2-201ENST00000374673 RNLSQ5VYX0 342 aa12.81□□□□□ -0.36
HSPG2-201ENST00000374673 TMPRSS11AQ6ZMR5 421 aa12.81□□□□□ -0.36
HSPG2-201ENST00000374673 KLHL36Q8N4N3 616 aa12.81□□□□□ -0.36
HSPG2-201ENST00000374673 OR8G5Q8NG78 346 aa12.81□□□□□ -0.36
HSPG2-201ENST00000374673 OR52N1Q8NH53 320 aa12.81□□□□□ -0.36
HSPG2-201ENST00000374673 MYDGFQ969H8 173 aa12.81□□□□□ -0.36
HSPG2-201ENST00000374673 PPP1R14AQ96A00 147 aa12.81□□□□□ -0.36
HSPG2-201ENST00000374673 LYZL4Q96KX0 146 aa12.81□□□□□ -0.36
HSPG2-201ENST00000374673 SORCS2Q96PQ0 1159 aa12.81□□□□□ -0.36
HSPG2-201ENST00000374673 FOXC2Q99958 501 aa12.81□□□□□ -0.36
HSPG2-201ENST00000374673 VRK1Q99986 396 aaPredicted RBP12.81□□□□□ -0.36
HSPG2-201ENST00000374673 RAB1BQ9H0U4 201 aa12.81□□□□□ -0.36
HSPG2-201ENST00000374673 DUSP21Q9H596 190 aa12.81□□□□□ -0.36
HSPG2-201ENST00000374673 PAK1IP1Q9NWT1 392 aaPredicted RBP12.81□□□□□ -0.36
HSPG2-201ENST00000374673 GTF2A1LQ9UNN4 478 aa12.81□□□□□ -0.36
HSPG2-201ENST00000374673 CENPEQ02224 2701 aa12.81□□□□□ -0.36
HSPG2-201ENST00000374673 GGT3PA6NGU5 568 aa12.8□□□□□ -0.36
HSPG2-201ENST00000374673 ZSCAN5BA6NJL1 495 aa12.8□□□□□ -0.36
HSPG2-201ENST00000374673 CD300LBA8K4G0 201 aa12.8□□□□□ -0.36
HSPG2-201ENST00000374673 PTGES3LE9PB15 166 aa12.8□□□□□ -0.36
HSPG2-201ENST00000374673 ERCC1P07992 297 aaPredicted RBP12.8□□□□□ -0.36
HSPG2-201ENST00000374673 HTR1AP08908 422 aa12.8□□□□□ -0.36
HSPG2-201ENST00000374673 DDOSTP39656 456 aa12.8□□□□□ -0.36
HSPG2-201ENST00000374673 ZNF81P51508 661 aa12.8□□□□□ -0.36
HSPG2-201ENST00000374673 CCR9P51686 369 aa12.8□□□□□ -0.36
HSPG2-201ENST00000374673 ATP5J2P56134 94 aa12.8□□□□□ -0.36
HSPG2-201ENST00000374673 TNK1Q13470 666 aa12.8□□□□□ -0.36
HSPG2-201ENST00000374673 OR8B8Q15620 311 aa12.8□□□□□ -0.36
HSPG2-201ENST00000374673 WDR38Q5JTN6 314 aa12.8□□□□□ -0.36
HSPG2-201ENST00000374673 OR2G6Q5TZ20 316 aa12.8□□□□□ -0.36
HSPG2-201ENST00000374673 Q6ZR03 302 aa12.8□□□□□ -0.36
HSPG2-201ENST00000374673 OR5AS1Q8N127 324 aa12.8□□□□□ -0.36
HSPG2-201ENST00000374673 ZCCHC24Q8N2G6 241 aaKnown RBP12.8□□□□□ -0.36
HSPG2-201ENST00000374673 ZNF786Q8N393 782 aa12.8□□□□□ -0.36
HSPG2-201ENST00000374673 PRSS35Q8N3Z0 413 aa12.8□□□□□ -0.36
HSPG2-201ENST00000374673 OR56B2PQ8NGI1 322 aa12.8□□□□□ -0.36
HSPG2-201ENST00000374673 OR2G2Q8NGZ5 317 aa12.8□□□□□ -0.36
HSPG2-201ENST00000374673 SPRYD4Q8WW59 207 aaPredicted RBP12.8□□□□□ -0.36
HSPG2-201ENST00000374673 NEU4Q8WWR8 484 aaPredicted RBP12.8□□□□□ -0.36
HSPG2-201ENST00000374673 GTF3AQ92664 365 aaKnown RBP12.8□□□□□ -0.36
HSPG2-201ENST00000374673 PERPQ96FX8 193 aa12.8□□□□□ -0.36
HSPG2-201ENST00000374673 DIRC2Q96SL1 478 aa12.8□□□□□ -0.36
HSPG2-201ENST00000374673 SLC30A2Q9BRI3 323 aa12.8□□□□□ -0.36
HSPG2-201ENST00000374673 TPK1Q9H3S4 243 aa12.8□□□□□ -0.36
HSPG2-201ENST00000374673 MSL2Q9HCI7 577 aa12.8□□□□□ -0.36
HSPG2-201ENST00000374673 NKIRAS2Q9NYR9 191 aa12.8□□□□□ -0.36
HSPG2-201ENST00000374673 CLEC2DQ9UHP7 191 aa12.8□□□□□ -0.36
HSPG2-201ENST00000374673 BLOC1S6Q9UL45 172 aa12.8□□□□□ -0.36
HSPG2-201ENST00000374673 ZDHHC8Q9ULC8 765 aa12.8□□□□□ -0.36
HSPG2-201ENST00000374673 SLC22A13Q9Y226 551 aa12.8□□□□□ -0.36
HSPG2-201ENST00000374673 ANKRD17O75179 2603 aaKnown RBP12.8□□□□□ -0.36
HSPG2-201ENST00000374673 SPG11Q96JI7 2443 aa12.8□□□□□ -0.36
HSPG2-201ENST00000374673 A0A1B0GWJ7 208 aa12.79□□□□□ -0.36
HSPG2-201ENST00000374673 LOC390937A0A1W2PQ73 354 aa12.79□□□□□ -0.36
HSPG2-201ENST00000374673 LILRA1O75019 489 aa12.79□□□□□ -0.36
HSPG2-201ENST00000374673 NDUFS7O75251 213 aa12.79□□□□□ -0.36
HSPG2-201ENST00000374673 IGHV1-46P01743 117 aa12.79□□□□□ -0.36
HSPG2-201ENST00000374673 IGHV4-39P01824 125 aa12.79□□□□□ -0.36
HSPG2-201ENST00000374673 ATP6V1B1P15313 513 aa12.79□□□□□ -0.36
HSPG2-201ENST00000374673 CCL1P22362 96 aa12.79□□□□□ -0.36
HSPG2-201ENST00000374673 KIR3DL2P43630 455 aa12.79□□□□□ -0.36
HSPG2-201ENST00000374673 TGM4P49221 684 aa12.79□□□□□ -0.36
HSPG2-201ENST00000374673 GSK3AP49840 483 aa12.79□□□□□ -0.36
HSPG2-201ENST00000374673 EFNA4P52798 201 aa12.79□□□□□ -0.36
HSPG2-201ENST00000374673 GBX2P52951 348 aaPredicted RBP12.79□□□□□ -0.36
HSPG2-201ENST00000374673 NANOS3P60323 173 aaKnown RBP12.79□□□□□ -0.36
HSPG2-201ENST00000374673 ALKBH1Q13686 389 aaKnown RBP12.79□□□□□ -0.36
HSPG2-201ENST00000374673 PCGF3Q3KNV8 242 aa12.79□□□□□ -0.36
HSPG2-201ENST00000374673 FAM209AQ5JX71 171 aa12.79□□□□□ -0.36
HSPG2-201ENST00000374673 Q6ZSR3 168 aa12.79□□□□□ -0.36
HSPG2-201ENST00000374673 PLPP7Q8NBV4 271 aa12.79□□□□□ -0.36
HSPG2-201ENST00000374673 ZNF485Q8NCK3 441 aa12.79□□□□□ -0.36
HSPG2-201ENST00000374673 BHLHE23Q8NDY6 225 aa12.79□□□□□ -0.36
HSPG2-201ENST00000374673 OR51E1Q8TCB6 317 aa12.79□□□□□ -0.36
HSPG2-201ENST00000374673 SOX7Q9BT81 388 aa12.79□□□□□ -0.36
HSPG2-201ENST00000374673 CDCA4Q9BXL8 241 aa12.79□□□□□ -0.36
HSPG2-201ENST00000374673 CXXC4Q9H2H0 198 aa12.79□□□□□ -0.36
HSPG2-201ENST00000374673 BARX1Q9HBU1 254 aaPredicted RBP12.79□□□□□ -0.36
HSPG2-201ENST00000374673 GPR84Q9NQS5 396 aa12.79□□□□□ -0.36
HSPG2-201ENST00000374673 MRPL15Q9P015 296 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms