RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 ZBTB37Q5TC79 503 aa10.97□□□□□ -0.65
PRPF4-202ENST00000374199 RAB12Q6IQ22 244 aa10.97□□□□□ -0.65
PRPF4-202ENST00000374199 NAA40Q86UY6 237 aa10.97□□□□□ -0.65
PRPF4-202ENST00000374199 MEIOBQ8N635 442 aa10.97□□□□□ -0.65
PRPF4-202ENST00000374199 IL22RA1Q8N6P7 574 aa10.97□□□□□ -0.65
PRPF4-202ENST00000374199 TMEM229BQ8NBD8 167 aa10.97□□□□□ -0.65
PRPF4-202ENST00000374199 SGK3Q96BR1 496 aa10.97□□□□□ -0.65
PRPF4-202ENST00000374199 SMAD5Q99717 465 aaKnown RBP10.97□□□□□ -0.65
PRPF4-202ENST00000374199 SLC2A8Q9NY64 477 aa10.97□□□□□ -0.65
PRPF4-202ENST00000374199 ZNF221Q9UK13 617 aa10.97□□□□□ -0.65
PRPF4-202ENST00000374199 TIMM10BQ9Y5J6 103 aa10.97□□□□□ -0.65
PRPF4-202ENST00000374199 N6AMT1Q9Y5N5 214 aa10.97□□□□□ -0.65
PRPF4-202ENST00000374199 LIPGQ9Y5X9 500 aa10.97□□□□□ -0.65
PRPF4-202ENST00000374199 FRYQ5TBA9 3013 aa10.97□□□□□ -0.65
PRPF4-202ENST00000374199 A0A1B0GUH1 482 aa10.97□□□□□ -0.65
PRPF4-202ENST00000374199 M0R135 149 aa10.97□□□□□ -0.65
PRPF4-202ENST00000374199 UBBP0CG47 229 aa10.97□□□□□ -0.65
PRPF4-202ENST00000374199 GIFP27352 417 aa10.97□□□□□ -0.65
PRPF4-202ENST00000374199 ZP1P60852 638 aa10.97□□□□□ -0.65
PRPF4-202ENST00000374199 PCBD1P61457 104 aa10.97□□□□□ -0.65
PRPF4-202ENST00000374199 SNAI3Q3KNW1 292 aa10.97□□□□□ -0.65
PRPF4-202ENST00000374199 CD276Q5ZPR3 534 aa10.97□□□□□ -0.65
PRPF4-202ENST00000374199 RNF144BQ7Z419 303 aa10.97□□□□□ -0.65
PRPF4-202ENST00000374199 GALNTL5Q7Z4T8 443 aa10.97□□□□□ -0.65
PRPF4-202ENST00000374199 FGFBP3Q8TAT2 258 aa10.97□□□□□ -0.65
PRPF4-202ENST00000374199 GCDHQ92947 438 aaPredicted RBP10.97□□□□□ -0.65
PRPF4-202ENST00000374199 SPTSSAQ969W0 71 aa10.97□□□□□ -0.65
PRPF4-202ENST00000374199 ZNF799Q96GE5 643 aa10.97□□□□□ -0.65
PRPF4-202ENST00000374199 ZNF75AQ96N20 296 aa10.97□□□□□ -0.65
PRPF4-202ENST00000374199 RBM24Q9BX46 236 aaKnown RBP10.97□□□□□ -0.65
PRPF4-202ENST00000374199 TM2D1Q9BX74 207 aa10.97□□□□□ -0.65
PRPF4-202ENST00000374199 IRF2BPLQ9H1B7 796 aa10.97□□□□□ -0.65
PRPF4-202ENST00000374199 C20orf85Q9H1P6 137 aa10.97□□□□□ -0.65
PRPF4-202ENST00000374199 ASPMQ8IZT6 3477 aa10.97□□□□□ -0.65
PRPF4-202ENST00000374199 TFECO14948 347 aaPredicted RBP10.97□□□□□ -0.65
PRPF4-202ENST00000374199 SGCEO43556 437 aa10.97□□□□□ -0.65
PRPF4-202ENST00000374199 ZNF735P0CB33 412 aa10.97□□□□□ -0.65
PRPF4-202ENST00000374199 KCNJ8Q15842 424 aa10.97□□□□□ -0.65
PRPF4-202ENST00000374199 MOGAT2Q3SYC2 334 aa10.97□□□□□ -0.65
PRPF4-202ENST00000374199 TBRG1Q3YBR2 411 aa10.97□□□□□ -0.65
PRPF4-202ENST00000374199 ZNF766Q5HY98 468 aa10.97□□□□□ -0.65
PRPF4-202ENST00000374199 IGFL3Q6UXB1 125 aa10.97□□□□□ -0.65
PRPF4-202ENST00000374199 LINC00696Q6ZRV3 163 aa10.97□□□□□ -0.65
PRPF4-202ENST00000374199 FAM57BQ71RH2 274 aa10.97□□□□□ -0.65
PRPF4-202ENST00000374199 ABHD12BQ7Z5M8 362 aaPredicted RBP10.97□□□□□ -0.65
PRPF4-202ENST00000374199 SKA3Q8IX90 412 aa10.97□□□□□ -0.65
PRPF4-202ENST00000374199 UBE2J2Q8N2K1 259 aa10.97□□□□□ -0.65
PRPF4-202ENST00000374199 UBASH3BQ8TF42 649 aa10.97□□□□□ -0.65
PRPF4-202ENST00000374199 CACNG6Q9BXT2 260 aa10.97□□□□□ -0.65
PRPF4-202ENST00000374199 PARPBPQ9NWS1 579 aa10.97□□□□□ -0.65
PRPF4-202ENST00000374199 A0A0A6YYD4 124 aa10.96□□□□□ -0.65
PRPF4-202ENST00000374199 LINC00854A0A1B0GVQ3 168 aa10.96□□□□□ -0.65
PRPF4-202ENST00000374199 PRAF2O60831 178 aa10.96□□□□□ -0.65
PRPF4-202ENST00000374199 MT-ND4P03905 459 aa10.96□□□□□ -0.65
PRPF4-202ENST00000374199 IL5P05113 134 aa10.96□□□□□ -0.65
PRPF4-202ENST00000374199 ABOP16442 354 aa10.96□□□□□ -0.65
PRPF4-202ENST00000374199 PSMB1P20618 241 aaKnown RBP10.96□□□□□ -0.65
PRPF4-202ENST00000374199 PPIAP62937 165 aaKnown RBP10.96□□□□□ -0.65
PRPF4-202ENST00000374199 PMPCAQ10713 525 aa10.96□□□□□ -0.65
PRPF4-202ENST00000374199 TSPO2Q5TGU0 170 aa10.96□□□□□ -0.65
PRPF4-202ENST00000374199 LPAR5Q9H1C0 372 aa10.96□□□□□ -0.65
PRPF4-202ENST00000374199 NUDT15Q9NV35 164 aa10.96□□□□□ -0.65
PRPF4-202ENST00000374199 POLR1DQ9Y2S0 133 aa10.96□□□□□ -0.65
PRPF4-202ENST00000374199 F10P00742 488 aa10.96□□□□□ -0.66
PRPF4-202ENST00000374199 YES1P07947 543 aa10.96□□□□□ -0.66
PRPF4-202ENST00000374199 SULT1A3P0DMM9 295 aa10.96□□□□□ -0.66
PRPF4-202ENST00000374199 SULT1A4P0DMN0 295 aa10.96□□□□□ -0.66
PRPF4-202ENST00000374199 INPP1P49441 399 aa10.96□□□□□ -0.66
PRPF4-202ENST00000374199 CEACAM16Q2WEN9 425 aa10.96□□□□□ -0.66
PRPF4-202ENST00000374199 SLC36A1Q7Z2H8 476 aa10.96□□□□□ -0.66
PRPF4-202ENST00000374199 TMEM178AQ8NBL3 297 aa10.96□□□□□ -0.66
PRPF4-202ENST00000374199 AKAP1Q92667 903 aaKnown RBP eCLIP10.96□□□□□ -0.66
PRPF4-202ENST00000374199 CLCF1Q9UBD9 225 aa10.96□□□□□ -0.66
PRPF4-202ENST00000374199 GTF2A1LQ9UNN4 478 aa10.96□□□□□ -0.66
PRPF4-202ENST00000374199 hCG_38984A0A1B0GV85 526 aa10.96□□□□□ -0.66
PRPF4-202ENST00000374199 CA11O75493 328 aa10.96□□□□□ -0.66
PRPF4-202ENST00000374199 CCR6P51684 374 aa10.96□□□□□ -0.66
PRPF4-202ENST00000374199 UBE2V2Q15819 145 aa10.96□□□□□ -0.66
PRPF4-202ENST00000374199 C1QTNF12Q5T7M4 302 aa10.96□□□□□ -0.66
PRPF4-202ENST00000374199 ZNF283Q8N7M2 679 aa10.96□□□□□ -0.66
PRPF4-202ENST00000374199 MED12Q93074 2177 aa10.96□□□□□ -0.66
PRPF4-202ENST00000374199 ALKBH3Q96Q83 286 aaPredicted RBP10.96□□□□□ -0.66
PRPF4-202ENST00000374199 ARGFXA6NJG6 315 aa10.95□□□□□ -0.66
PRPF4-202ENST00000374199 PEX14O75381 377 aa10.95□□□□□ -0.66
PRPF4-202ENST00000374199 ZNF32P17041 273 aa10.95□□□□□ -0.66
PRPF4-202ENST00000374199 ZNF93P35789 620 aaPredicted RBP10.95□□□□□ -0.66
PRPF4-202ENST00000374199 IFITM2Q01629 132 aa10.95□□□□□ -0.66
PRPF4-202ENST00000374199 SRSF6Q13247 344 aaKnown RBP10.95□□□□□ -0.66
PRPF4-202ENST00000374199 Q8NFD4 153 aa10.95□□□□□ -0.66
PRPF4-202ENST00000374199 ALX4Q9H161 411 aaPredicted RBP10.95□□□□□ -0.66
PRPF4-202ENST00000374199 SLC7A10Q9NS82 523 aa10.95□□□□□ -0.66
PRPF4-202ENST00000374199 DCDC2BA2VCK2 349 aa10.95□□□□□ -0.66
PRPF4-202ENST00000374199 FAM166BA8MTA8 275 aa10.95□□□□□ -0.66
PRPF4-202ENST00000374199 H3BSH0 61 aa10.95□□□□□ -0.66
PRPF4-202ENST00000374199 NKX2-8O15522 239 aa10.95□□□□□ -0.66
PRPF4-202ENST00000374199 C1QBP02746 253 aa10.95□□□□□ -0.66
PRPF4-202ENST00000374199 ITGB2P05107 769 aa10.95□□□□□ -0.66
PRPF4-202ENST00000374199 DBHP09172 617 aa10.95□□□□□ -0.66
PRPF4-202ENST00000374199 PTHLHP12272 177 aa10.95□□□□□ -0.66
PRPF4-202ENST00000374199 PRKXP51817 358 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms