RNA–Protein interactions for RNA: ENST00000373602.9

CCDC28B-201, Transcript of coiled-coil domain containing 28B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC28B, Length 1,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28B-201ENST00000373602 ADAT1Q9BUB4 502 aaKnown RBP18.15■□□□□ 0.5
CCDC28B-201ENST00000373602 MRI1Q9BV20 369 aa18.15■□□□□ 0.5
CCDC28B-201ENST00000373602 TOR3AQ9H497 397 aa18.15■□□□□ 0.5
CCDC28B-201ENST00000373602 UFSP2Q9NUQ7 469 aa18.15■□□□□ 0.5
CCDC28B-201ENST00000373602 N6AMT1Q9Y5N5 214 aa18.15■□□□□ 0.5
CCDC28B-201ENST00000373602 FLOT2Q14254 428 aa18.14■□□□□ 0.49
CCDC28B-201ENST00000373602 GINS1Q14691 196 aa18.14■□□□□ 0.49
CCDC28B-201ENST00000373602 TUSC1Q2TAM9 212 aa18.14■□□□□ 0.49
CCDC28B-201ENST00000373602 ARMCX4Q5H9R4 360 aa18.14■□□□□ 0.49
CCDC28B-201ENST00000373602 OR56B2PQ8NGI1 322 aa18.14■□□□□ 0.49
CCDC28B-201ENST00000373602 OR6N2Q8NGY6 317 aa18.14■□□□□ 0.49
CCDC28B-201ENST00000373602 BCAS4Q8TDM0 211 aa18.14■□□□□ 0.49
CCDC28B-201ENST00000373602 RNF133Q8WVZ7 376 aa18.14■□□□□ 0.49
CCDC28B-201ENST00000373602 C22orf15Q8WYQ4 148 aa18.14■□□□□ 0.49
CCDC28B-201ENST00000373602 DACT3Q96B18 629 aaPredicted RBP18.14■□□□□ 0.49
CCDC28B-201ENST00000373602 SLC7A6OSQ96CW6 309 aaPredicted RBP18.14■□□□□ 0.49
CCDC28B-201ENST00000373602 PLEKHA8Q96JA3 519 aa18.14■□□□□ 0.49
CCDC28B-201ENST00000373602 ABHD6Q9BV23 337 aa18.14■□□□□ 0.49
CCDC28B-201ENST00000373602 FN3KRPQ9HA64 309 aa18.14■□□□□ 0.49
CCDC28B-201ENST00000373602 NUP50Q9UKX7 468 aa18.14■□□□□ 0.49
CCDC28B-201ENST00000373602 E2F6O75461 281 aa18.13■□□□□ 0.49
CCDC28B-201ENST00000373602 OSMP13725 252 aa18.13■□□□□ 0.49
CCDC28B-201ENST00000373602 PAICSP22234 425 aaKnown RBP18.13■□□□□ 0.49
CCDC28B-201ENST00000373602 POU1F1P28069 291 aa18.13■□□□□ 0.49
CCDC28B-201ENST00000373602 CD80P33681 288 aa18.13■□□□□ 0.49
CCDC28B-201ENST00000373602 DDOSTP39656 456 aa18.13■□□□□ 0.49
CCDC28B-201ENST00000373602 CX3CR1P49238 355 aa18.13■□□□□ 0.49
CCDC28B-201ENST00000373602 GNB2P62879 340 aa18.13■□□□□ 0.49
CCDC28B-201ENST00000373602 KLF17Q5JT82 389 aaPredicted RBP18.13■□□□□ 0.49
CCDC28B-201ENST00000373602 DCDC5Q6ZRR9 648 aa18.13■□□□□ 0.49
CCDC28B-201ENST00000373602 RHOUQ7L0Q8 258 aa18.13■□□□□ 0.49
CCDC28B-201ENST00000373602 SHFQ7M4L6 423 aa18.13■□□□□ 0.49
CCDC28B-201ENST00000373602 NLRC3Q7RTR2 1065 aa18.13■□□□□ 0.49
CCDC28B-201ENST00000373602 SPATA24Q86W54 205 aa18.13■□□□□ 0.49
CCDC28B-201ENST00000373602 TIGD4Q8IY51 512 aa18.13■□□□□ 0.49
CCDC28B-201ENST00000373602 HS3ST5Q8IZT8 346 aa18.13■□□□□ 0.49
CCDC28B-201ENST00000373602 SPERTQ8NA61 448 aa18.13■□□□□ 0.49
CCDC28B-201ENST00000373602 OR8B3Q8NGG8 313 aa18.13■□□□□ 0.49
CCDC28B-201ENST00000373602 OTULINQ96BN8 352 aa18.13■□□□□ 0.49
CCDC28B-201ENST00000373602 OR8B2Q96RD0 313 aa18.13■□□□□ 0.49
CCDC28B-201ENST00000373602 OR51V1Q9H2C8 321 aa18.13■□□□□ 0.49
CCDC28B-201ENST00000373602 YY1AP1Q9H869 796 aa18.13■□□□□ 0.49
CCDC28B-201ENST00000373602 SP140LQ9H930 580 aa18.13■□□□□ 0.49
CCDC28B-201ENST00000373602 RNF7Q9UBF6 113 aa18.13■□□□□ 0.49
CCDC28B-201ENST00000373602 TCRBV3S1A0A5B6 114 aa18.12■□□□□ 0.49
CCDC28B-201ENST00000373602 HAX1O00165 279 aa18.12■□□□□ 0.49
CCDC28B-201ENST00000373602 FKBP6O75344 327 aa18.12■□□□□ 0.49
CCDC28B-201ENST00000373602 APOC1P02654 83 aa18.12■□□□□ 0.49
CCDC28B-201ENST00000373602 HMGN1P05114 100 aa18.12■□□□□ 0.49
CCDC28B-201ENST00000373602 HSD11B1P28845 292 aa18.12■□□□□ 0.49
CCDC28B-201ENST00000373602 PITPNBP48739 271 aa18.12■□□□□ 0.49
CCDC28B-201ENST00000373602 CBX1P83916 185 aa18.12■□□□□ 0.49
CCDC28B-201ENST00000373602 LRRN1Q6UXK5 716 aa18.12■□□□□ 0.49
CCDC28B-201ENST00000373602 C12orf54Q6X4T0 127 aa18.12■□□□□ 0.49
CCDC28B-201ENST00000373602 PRSS45Q7RTY3 260 aa18.12■□□□□ 0.49
CCDC28B-201ENST00000373602 ZDHHC22Q8N966 263 aa18.12■□□□□ 0.49
CCDC28B-201ENST00000373602 C19orf18Q8NEA5 215 aa18.12■□□□□ 0.49
CCDC28B-201ENST00000373602 RAB40AQ8WXH6 277 aa18.12■□□□□ 0.49
CCDC28B-201ENST00000373602 AMELYQ99218 206 aa18.12■□□□□ 0.49
CCDC28B-201ENST00000373602 ZNF556Q9HAH1 456 aa18.12■□□□□ 0.49
CCDC28B-201ENST00000373602 NTN4Q9HB63 628 aa18.12■□□□□ 0.49
CCDC28B-201ENST00000373602 ESM1Q9NQ30 184 aa18.12■□□□□ 0.49
CCDC28B-201ENST00000373602 POMPQ9Y244 141 aa18.12■□□□□ 0.49
CCDC28B-201ENST00000373602 IGHV2-70DA0A0C4DH43 119 aa18.11■□□□□ 0.49
CCDC28B-201ENST00000373602 PRR23D1E9PI22 279 aaPredicted RBP18.11■□□□□ 0.49
CCDC28B-201ENST00000373602 TBX1O43435 398 aa18.11■□□□□ 0.49
CCDC28B-201ENST00000373602 ANXA2P07355 339 aaKnown RBP18.11■□□□□ 0.49
CCDC28B-201ENST00000373602 PRR23D2P0DMB1 279 aaPredicted RBP18.11■□□□□ 0.49
CCDC28B-201ENST00000373602 PPIAL4GP0DN37 164 aa18.11■□□□□ 0.49
CCDC28B-201ENST00000373602 ANXA8P13928 327 aa18.11■□□□□ 0.49
CCDC28B-201ENST00000373602 OPRL1P41146 370 aa18.11■□□□□ 0.49
CCDC28B-201ENST00000373602 ACTG1P63261 375 aa18.11■□□□□ 0.49
CCDC28B-201ENST00000373602 FAM3AP98173 230 aa18.11■□□□□ 0.49
CCDC28B-201ENST00000373602 CDK5Q00535 292 aa18.11■□□□□ 0.49
CCDC28B-201ENST00000373602 PLBD1Q6P4A8 553 aa18.11■□□□□ 0.49
CCDC28B-201ENST00000373602 LYPD2Q6UXB3 125 aa18.11■□□□□ 0.49
CCDC28B-201ENST00000373602 BTNL3Q6UXE8 466 aa18.11■□□□□ 0.49
CCDC28B-201ENST00000373602 SLC16A9Q7RTY1 509 aa18.11■□□□□ 0.49
CCDC28B-201ENST00000373602 PAPD5Q8NDF8 572 aaKnown RBP18.11■□□□□ 0.49
CCDC28B-201ENST00000373602 SGK3Q96BR1 496 aa18.11■□□□□ 0.49
CCDC28B-201ENST00000373602 ZMYND19Q96E35 227 aaPredicted RBP18.11■□□□□ 0.49
CCDC28B-201ENST00000373602 DNAJB9Q9UBS3 223 aa18.11■□□□□ 0.49
CCDC28B-201ENST00000373602 CLN8Q9UBY8 286 aa18.11■□□□□ 0.49
CCDC28B-201ENST00000373602 ZNF69Q9UC07 566 aa18.11■□□□□ 0.49
CCDC28B-201ENST00000373602 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP18.1■□□□□ 0.49
CCDC28B-201ENST00000373602 KIR2DS1A0A191URI9 304 aa18.1■□□□□ 0.49
CCDC28B-201ENST00000373602 LGALS8O00214 317 aa18.1■□□□□ 0.49
CCDC28B-201ENST00000373602 DNAJC8O75937 253 aaPredicted RBP18.1■□□□□ 0.49
CCDC28B-201ENST00000373602 PRKACGP22612 351 aa18.1■□□□□ 0.49
CCDC28B-201ENST00000373602 PSMB10P40306 273 aa18.1■□□□□ 0.49
CCDC28B-201ENST00000373602 ZNF121P58317 390 aaPredicted RBP18.1■□□□□ 0.49
CCDC28B-201ENST00000373602 HOXA4Q00056 320 aaPredicted RBP18.1■□□□□ 0.49
CCDC28B-201ENST00000373602 MZT1Q08AG7 82 aa18.1■□□□□ 0.49
CCDC28B-201ENST00000373602 TIGD6Q17RP2 521 aa18.1■□□□□ 0.49
CCDC28B-201ENST00000373602 WDR25Q64LD2 544 aaPredicted RBP18.1■□□□□ 0.49
CCDC28B-201ENST00000373602 ZNF841Q6ZN19 808 aa18.1■□□□□ 0.49
CCDC28B-201ENST00000373602 OR52H1Q8NGJ2 320 aa18.1■□□□□ 0.49
CCDC28B-201ENST00000373602 REEP6Q96HR9 211 aa18.1■□□□□ 0.49
CCDC28B-201ENST00000373602 DOCK11Q5JSL3 2073 aa18.1■□□□□ 0.49
CCDC28B-201ENST00000373602 TMEM89A2RUT3 159 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms