RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 SLC30A7Q8NEW0 376 aa13.22□□□□□ -0.29
NDC1-201ENST00000371429 PPP1R3CQ9UQK1 317 aa13.22□□□□□ -0.29
NDC1-201ENST00000371429 FER1L6Q2WGJ9 1857 aa13.21□□□□□ -0.29
NDC1-201ENST00000371429 IFITM5A6NNB3 132 aa13.21□□□□□ -0.29
NDC1-201ENST00000371429 NDUFB3O43676 98 aa13.21□□□□□ -0.29
NDC1-201ENST00000371429 PDGFBP01127 241 aaPredicted RBP13.21□□□□□ -0.29
NDC1-201ENST00000371429 HLA-HP01893 362 aa13.21□□□□□ -0.29
NDC1-201ENST00000371429 NKX6-1P78426 367 aaPredicted RBP13.21□□□□□ -0.29
NDC1-201ENST00000371429 RTL8BQ17RB0 113 aa13.21□□□□□ -0.29
NDC1-201ENST00000371429 GAB4Q2WGN9 574 aa13.21□□□□□ -0.29
NDC1-201ENST00000371429 C2orf76Q3KRA6 126 aa13.21□□□□□ -0.29
NDC1-201ENST00000371429 SSX9Q7RTT3 188 aa13.21□□□□□ -0.29
NDC1-201ENST00000371429 SLC36A1Q7Z2H8 476 aa13.21□□□□□ -0.29
NDC1-201ENST00000371429 SFTPA2Q8IWL1 248 aa13.21□□□□□ -0.29
NDC1-201ENST00000371429 CMTM4Q8IZR5 234 aa13.21□□□□□ -0.29
NDC1-201ENST00000371429 RND1Q92730 232 aa13.21□□□□□ -0.29
NDC1-201ENST00000371429 FGF20Q9NP95 211 aaPredicted RBP13.21□□□□□ -0.29
NDC1-201ENST00000371429 LRP12Q9Y561 859 aa13.21□□□□□ -0.29
NDC1-201ENST00000371429 A3GALT2U3KPV4 340 aa13.21□□□□□ -0.29
NDC1-201ENST00000371429 B4E171 279 aa13.21□□□□□ -0.29
NDC1-201ENST00000371429 TSPAN7P41732 249 aa13.21□□□□□ -0.29
NDC1-201ENST00000371429 GPM6AP51674 278 aa13.21□□□□□ -0.29
NDC1-201ENST00000371429 MRPS34P82930 218 aaKnown RBP13.21□□□□□ -0.29
NDC1-201ENST00000371429 LRRC10Q5BKY1 277 aa13.21□□□□□ -0.29
NDC1-201ENST00000371429 OR2T2Q6IF00 324 aa13.21□□□□□ -0.29
NDC1-201ENST00000371429 GPR32P1Q8NGA4 272 aa13.21□□□□□ -0.29
NDC1-201ENST00000371429 MALSU1Q96EH3 234 aa13.21□□□□□ -0.29
NDC1-201ENST00000371429 MRPS24Q96EL2 167 aaKnown RBP13.21□□□□□ -0.29
NDC1-201ENST00000371429 ADAT1Q9BUB4 502 aaKnown RBP13.21□□□□□ -0.29
NDC1-201ENST00000371429 A0A0D9SG52 128 aa13.21□□□□□ -0.3
NDC1-201ENST00000371429 ARPC3O15145 178 aa13.21□□□□□ -0.3
NDC1-201ENST00000371429 MGMTP16455 207 aa13.21□□□□□ -0.3
NDC1-201ENST00000371429 ZNF32P17041 273 aa13.21□□□□□ -0.3
NDC1-201ENST00000371429 OR2B11Q5JQS5 317 aa13.21□□□□□ -0.3
NDC1-201ENST00000371429 RFPL4BQ6ZWI9 263 aa13.21□□□□□ -0.3
NDC1-201ENST00000371429 COMMD7Q86VX2 200 aa13.21□□□□□ -0.3
NDC1-201ENST00000371429 OSR2Q8N2R0 312 aa13.21□□□□□ -0.3
NDC1-201ENST00000371429 OR52I2Q8NH67 350 aa13.21□□□□□ -0.3
NDC1-201ENST00000371429 ITPKCQ96DU7 683 aa13.21□□□□□ -0.3
NDC1-201ENST00000371429 C11orf54Q9H0W9 315 aaPredicted RBP13.21□□□□□ -0.3
NDC1-201ENST00000371429 RNF167Q9H6Y7 350 aa13.21□□□□□ -0.3
NDC1-201ENST00000371429 ISG20L2Q9H9L3 353 aaKnown RBP13.21□□□□□ -0.3
NDC1-201ENST00000371429 PLXNB2O15031 1838 aa13.21□□□□□ -0.3
NDC1-201ENST00000371429 EP300Q09472 2414 aaPredicted RBP13.21□□□□□ -0.3
NDC1-201ENST00000371429 A0A0B4J2A0 478 aa13.21□□□□□ -0.3
NDC1-201ENST00000371429 TGM6O95932 706 aa13.21□□□□□ -0.3
NDC1-201ENST00000371429 OR8U8P0C7N1 319 aa13.21□□□□□ -0.3
NDC1-201ENST00000371429 ELK1P19419 428 aa13.21□□□□□ -0.3
NDC1-201ENST00000371429 AADACP22760 399 aa13.21□□□□□ -0.3
NDC1-201ENST00000371429 GNG3P63215 75 aa13.21□□□□□ -0.3
NDC1-201ENST00000371429 PABPC1L2AQ5JQF8 200 aa13.21□□□□□ -0.3
NDC1-201ENST00000371429 ZNF626Q68DY1 528 aa13.21□□□□□ -0.3
NDC1-201ENST00000371429 CATSPERDQ86XM0 798 aa13.21□□□□□ -0.3
NDC1-201ENST00000371429 FAM109AQ8N4B1 249 aa13.21□□□□□ -0.3
NDC1-201ENST00000371429 HRH4Q9H3N8 390 aa13.21□□□□□ -0.3
NDC1-201ENST00000371429 NARFLQ9H6Q4 476 aa13.21□□□□□ -0.3
NDC1-201ENST00000371429 WDR54Q9H977 334 aa13.21□□□□□ -0.3
NDC1-201ENST00000371429 EXOSC3Q9NQT5 275 aaKnown RBP13.21□□□□□ -0.3
NDC1-201ENST00000371429 SHPKQ9UHJ6 478 aa13.21□□□□□ -0.3
NDC1-201ENST00000371429 TRIP11Q15643 1979 aa13.21□□□□□ -0.3
NDC1-201ENST00000371429 DOCK3Q8IZD9 2030 aa13.2□□□□□ -0.3
NDC1-201ENST00000371429 RER1O15258 196 aa13.2□□□□□ -0.3
NDC1-201ENST00000371429 SOX18P35713 384 aa13.2□□□□□ -0.3
NDC1-201ENST00000371429 MAGEA5P43359 124 aa13.2□□□□□ -0.3
NDC1-201ENST00000371429 HTD2P86397 168 aa13.2□□□□□ -0.3
NDC1-201ENST00000371429 CXorf67Q86X51 503 aaPredicted RBP13.2□□□□□ -0.3
NDC1-201ENST00000371429 OR51A4Q8NGJ6 313 aa13.2□□□□□ -0.3
NDC1-201ENST00000371429 OR13G1Q8NGZ3 307 aa13.2□□□□□ -0.3
NDC1-201ENST00000371429 FRZBQ92765 325 aa13.2□□□□□ -0.3
NDC1-201ENST00000371429 SDCBPO00560 298 aaPredicted RBP13.2□□□□□ -0.3
NDC1-201ENST00000371429 THBS4P35443 961 aa13.2□□□□□ -0.3
NDC1-201ENST00000371429 SERPINF1P36955 418 aa13.2□□□□□ -0.3
NDC1-201ENST00000371429 SLC25A1P53007 311 aa13.2□□□□□ -0.3
NDC1-201ENST00000371429 RPS16P62249 146 aaKnown RBP13.2□□□□□ -0.3
NDC1-201ENST00000371429 NUDCD2Q8WVJ2 157 aa13.2□□□□□ -0.3
NDC1-201ENST00000371429 EDARADDQ8WWZ3 215 aa13.2□□□□□ -0.3
NDC1-201ENST00000371429 SLC35B4Q969S0 331 aa13.2□□□□□ -0.3
NDC1-201ENST00000371429 MCHR2Q969V1 340 aa13.2□□□□□ -0.3
NDC1-201ENST00000371429 FCRL1Q96LA6 429 aa13.2□□□□□ -0.3
NDC1-201ENST00000371429 UHRF2Q96PU4 802 aa13.2□□□□□ -0.3
NDC1-201ENST00000371429 GFRA3O60609 400 aa13.2□□□□□ -0.3
NDC1-201ENST00000371429 FABP1P07148 127 aa13.2□□□□□ -0.3
NDC1-201ENST00000371429 SP9P0CG40 484 aa13.2□□□□□ -0.3
NDC1-201ENST00000371429 SFTPCP11686 197 aa13.2□□□□□ -0.3
NDC1-201ENST00000371429 MICBQ29980 383 aa13.2□□□□□ -0.3
NDC1-201ENST00000371429 TMEM200AQ86VY9 491 aa13.2□□□□□ -0.3
NDC1-201ENST00000371429 SUMF2Q8NBJ7 301 aa13.2□□□□□ -0.3
NDC1-201ENST00000371429 OR4Q3Q8NH05 313 aa13.2□□□□□ -0.3
NDC1-201ENST00000371429 SUCNR1Q9BXA5 334 aa13.2□□□□□ -0.3
NDC1-201ENST00000371429 KCNIP2Q9NS61 270 aa13.2□□□□□ -0.3
NDC1-201ENST00000371429 SIRT3Q9NTG7 399 aaPredicted RBP13.2□□□□□ -0.3
NDC1-201ENST00000371429 TRGV10A0A0A0MS01 117 aa13.2□□□□□ -0.3
NDC1-201ENST00000371429 A0A1W2PPV9 198 aa13.2□□□□□ -0.3
NDC1-201ENST00000371429 FCARP24071 287 aa13.2□□□□□ -0.3
NDC1-201ENST00000371429 FUT7Q11130 342 aa13.2□□□□□ -0.3
NDC1-201ENST00000371429 PEA15Q15121 130 aa13.2□□□□□ -0.3
NDC1-201ENST00000371429 OR8G2PQ6IF36 304 aa13.2□□□□□ -0.3
NDC1-201ENST00000371429 MRM1Q6IN84 353 aaKnown RBP13.2□□□□□ -0.3
NDC1-201ENST00000371429 ZNF774Q6NX45 483 aa13.2□□□□□ -0.3
NDC1-201ENST00000371429 SLC39A9Q9NUM3 307 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms