RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 ACTG2P63267 376 aa13.09□□□□□ -0.31
LMO4-201ENST00000370542 FOXF1Q12946 379 aa13.09□□□□□ -0.31
LMO4-201ENST00000370542 RNPS1Q15287 305 aaKnown RBP13.09□□□□□ -0.31
LMO4-201ENST00000370542 ZSWIM7Q19AV6 140 aa13.09□□□□□ -0.31
LMO4-201ENST00000370542 TUSC1Q2TAM9 212 aa13.09□□□□□ -0.31
LMO4-201ENST00000370542 CLVS2Q5SYC1 327 aa13.09□□□□□ -0.31
LMO4-201ENST00000370542 SYS1Q8N2H4 156 aa13.09□□□□□ -0.31
LMO4-201ENST00000370542 OR4Q3Q8NH05 313 aa13.09□□□□□ -0.31
LMO4-201ENST00000370542 PHOSPHO1Q8TCT1 267 aa13.09□□□□□ -0.31
LMO4-201ENST00000370542 RAB40AQ8WXH6 277 aa13.09□□□□□ -0.31
LMO4-201ENST00000370542 NSMAFQ92636 917 aa13.09□□□□□ -0.31
LMO4-201ENST00000370542 ORAI1Q96D31 301 aa13.09□□□□□ -0.31
LMO4-201ENST00000370542 MRGPRX4Q96LA9 322 aa13.09□□□□□ -0.31
LMO4-201ENST00000370542 SDF2Q99470 211 aa13.09□□□□□ -0.31
LMO4-201ENST00000370542 SRXN1Q9BYN0 137 aa13.09□□□□□ -0.31
LMO4-201ENST00000370542 TMEM185BQ9H7F4 350 aa13.09□□□□□ -0.31
LMO4-201ENST00000370542 ZNF701Q9NV72 531 aaPredicted RBP13.09□□□□□ -0.31
LMO4-201ENST00000370542 ZMAT5Q9UDW3 170 aaKnown RBP13.09□□□□□ -0.31
LMO4-201ENST00000370542 SLC22A23A1A5C7 686 aa13.08□□□□□ -0.32
LMO4-201ENST00000370542 G3V3Q6 166 aa13.08□□□□□ -0.32
LMO4-201ENST00000370542 TEX46H3BTG2 121 aa13.08□□□□□ -0.32
LMO4-201ENST00000370542 OGG1O15527 345 aa13.08□□□□□ -0.32
LMO4-201ENST00000370542 EIF4E2O60573 245 aaKnown RBP13.08□□□□□ -0.32
LMO4-201ENST00000370542 ALDOBP05062 364 aa13.08□□□□□ -0.32
LMO4-201ENST00000370542 RPS26P62854 115 aaKnown RBP13.08□□□□□ -0.32
LMO4-201ENST00000370542 HLXQ14774 488 aaPredicted RBP13.08□□□□□ -0.32
LMO4-201ENST00000370542 TOMM34Q15785 309 aaPredicted RBP13.08□□□□□ -0.32
LMO4-201ENST00000370542 ZNF141Q15928 474 aa13.08□□□□□ -0.32
LMO4-201ENST00000370542 ACSM3Q53FZ2 586 aa13.08□□□□□ -0.32
LMO4-201ENST00000370542 ZNF626Q68DY1 528 aa13.08□□□□□ -0.32
LMO4-201ENST00000370542 DMKNQ6E0U4 476 aaPredicted RBP13.08□□□□□ -0.32
LMO4-201ENST00000370542 ADAM5Q6NVV9 412 aa13.08□□□□□ -0.32
LMO4-201ENST00000370542 UQCC3Q6UW78 93 aa13.08□□□□□ -0.32
LMO4-201ENST00000370542 CFAP77Q6ZQR2 320 aa13.08□□□□□ -0.32
LMO4-201ENST00000370542 PGAP1Q75T13 922 aa13.08□□□□□ -0.32
LMO4-201ENST00000370542 SHFQ7M4L6 423 aa13.08□□□□□ -0.32
LMO4-201ENST00000370542 CPOQ8IVL8 374 aa13.08□□□□□ -0.32
LMO4-201ENST00000370542 CDH26Q8IXH8 852 aa13.08□□□□□ -0.32
LMO4-201ENST00000370542 LILRB1Q8NHL6 650 aaPredicted RBP13.08□□□□□ -0.32
LMO4-201ENST00000370542 SMAP2Q8WU79 429 aaPredicted RBP13.08□□□□□ -0.32
LMO4-201ENST00000370542 OIT3Q8WWZ8 545 aa13.08□□□□□ -0.32
LMO4-201ENST00000370542 OR7D2Q96RA2 312 aa13.08□□□□□ -0.32
LMO4-201ENST00000370542 DDOQ99489 341 aa13.08□□□□□ -0.32
LMO4-201ENST00000370542 CCL19Q99731 98 aa13.08□□□□□ -0.32
LMO4-201ENST00000370542 UBTD1Q9HAC8 227 aa13.08□□□□□ -0.32
LMO4-201ENST00000370542 BCO1Q9HAY6 547 aa13.08□□□□□ -0.32
LMO4-201ENST00000370542 HRASLSQ9HDD0 168 aa13.08□□□□□ -0.32
LMO4-201ENST00000370542 CTPS2Q9NRF8 586 aa13.08□□□□□ -0.32
LMO4-201ENST00000370542 TAS2R8Q9NYW2 309 aa13.08□□□□□ -0.32
LMO4-201ENST00000370542 KLHL13Q9P2N7 655 aa13.08□□□□□ -0.32
LMO4-201ENST00000370542 KCNE5Q9UJ90 142 aa13.08□□□□□ -0.32
LMO4-201ENST00000370542 ETV7Q9Y603 341 aa13.08□□□□□ -0.32
LMO4-201ENST00000370542 CADP27708 2225 aa13.07□□□□□ -0.32
LMO4-201ENST00000370542 NPIPA5A0A0B4J1W7 369 aa13.07□□□□□ -0.32
LMO4-201ENST00000370542 UNC119BA6NIH7 251 aa13.07□□□□□ -0.32
LMO4-201ENST00000370542 DUXAA6NLW8 204 aa13.07□□□□□ -0.32
LMO4-201ENST00000370542 GJE1A6NN92 205 aa13.07□□□□□ -0.32
LMO4-201ENST00000370542 NPIPA7E9PJI5 369 aa13.07□□□□□ -0.32
LMO4-201ENST00000370542 GMDSO60547 372 aa13.07□□□□□ -0.32
LMO4-201ENST00000370542 KHDRBS3O75525 346 aaKnown RBP13.07□□□□□ -0.32
LMO4-201ENST00000370542 AK1P00568 194 aa13.07□□□□□ -0.32
LMO4-201ENST00000370542 NPIPA8P0DM63 369 aa13.07□□□□□ -0.32
LMO4-201ENST00000370542 SRP9P49458 86 aaKnown RBP13.07□□□□□ -0.32
LMO4-201ENST00000370542 CCR6P51684 374 aa13.07□□□□□ -0.32
LMO4-201ENST00000370542 RAC3P60763 192 aa13.07□□□□□ -0.32
LMO4-201ENST00000370542 DGCR2P98153 550 aa13.07□□□□□ -0.32
LMO4-201ENST00000370542 HEPHL1Q6MZM0 1159 aa13.07□□□□□ -0.32
LMO4-201ENST00000370542 ARL9Q6T311 187 aa13.07□□□□□ -0.32
LMO4-201ENST00000370542 ZNF704Q6ZNC4 412 aaPredicted RBP13.07□□□□□ -0.32
LMO4-201ENST00000370542 TMUB2Q71RG4 321 aa13.07□□□□□ -0.32
LMO4-201ENST00000370542 NR2C2APQ86WQ0 139 aa13.07□□□□□ -0.32
LMO4-201ENST00000370542 CDK20Q8IZL9 346 aa13.07□□□□□ -0.32
LMO4-201ENST00000370542 CIARTQ8N365 385 aaPredicted RBP13.07□□□□□ -0.32
LMO4-201ENST00000370542 ZNF611Q8N823 705 aa13.07□□□□□ -0.32
LMO4-201ENST00000370542 OR51G2Q8NGK0 314 aa13.07□□□□□ -0.32
LMO4-201ENST00000370542 ABHD3Q8WU67 409 aa13.07□□□□□ -0.32
LMO4-201ENST00000370542 FCAMRQ8WWV6 532 aa13.07□□□□□ -0.32
LMO4-201ENST00000370542 ROBO4Q8WZ75 1007 aa13.07□□□□□ -0.32
LMO4-201ENST00000370542 FBXW5Q969U6 566 aa13.07□□□□□ -0.32
LMO4-201ENST00000370542 FAM46AQ96IP4 442 aaKnown RBP13.07□□□□□ -0.32
LMO4-201ENST00000370542 UQCC2Q9BRT2 126 aa13.07□□□□□ -0.32
LMO4-201ENST00000370542 HINT3Q9NQE9 182 aaKnown RBP13.07□□□□□ -0.32
LMO4-201ENST00000370542 CDHR4A6H8M9 788 aa13.06□□□□□ -0.32
LMO4-201ENST00000370542 NUDT19A8MXV4 375 aa13.06□□□□□ -0.32
LMO4-201ENST00000370542 ZNF264O43296 627 aa13.06□□□□□ -0.32
LMO4-201ENST00000370542 WIPF1O43516 503 aa13.06□□□□□ -0.32
LMO4-201ENST00000370542 MT-ND4P03905 459 aa13.06□□□□□ -0.32
LMO4-201ENST00000370542 UCHL1P09936 223 aa13.06□□□□□ -0.32
LMO4-201ENST00000370542 CALCBP10092 127 aa13.06□□□□□ -0.32
LMO4-201ENST00000370542 RPA2P15927 270 aa13.06□□□□□ -0.32
LMO4-201ENST00000370542 CXCL2P19875 107 aa13.06□□□□□ -0.32
LMO4-201ENST00000370542 SFTPDP35247 375 aa13.06□□□□□ -0.32
LMO4-201ENST00000370542 SELENOPP49908 381 aa13.06□□□□□ -0.32
LMO4-201ENST00000370542 SKP2Q13309 424 aa13.06□□□□□ -0.32
LMO4-201ENST00000370542 ARHGAP11BQ3KRB8 267 aa13.06□□□□□ -0.32
LMO4-201ENST00000370542 TMEM176BQ3YBM2 270 aaPredicted RBP13.06□□□□□ -0.32
LMO4-201ENST00000370542 SFRP5Q5T4F7 317 aa13.06□□□□□ -0.32
LMO4-201ENST00000370542 GSG1LQ6UXU4 331 aa13.06□□□□□ -0.32
LMO4-201ENST00000370542 FCRLAQ7L513 359 aa13.06□□□□□ -0.32
LMO4-201ENST00000370542 NUFIP2Q7Z417 695 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 330 ms