RNA–Protein interactions for RNA: ENST00000368671.3

CLRN3-201, Transcript of clarin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN3, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3-201ENST00000368671 CCT8L2Q96SF2 557 aa8.58□□□□□ -1.04
CLRN3-201ENST00000368671 TBX15Q96SF7 602 aa8.58□□□□□ -1.04
CLRN3-201ENST00000368671 FUZQ9BT04 418 aa8.58□□□□□ -1.04
CLRN3-201ENST00000368671 SMURF1Q9HCE7 757 aa8.58□□□□□ -1.04
CLRN3-201ENST00000368671 NOX4Q9NPH5 578 aa8.58□□□□□ -1.04
CLRN3-201ENST00000368671 DCAF13Q9NV06 445 aaKnown RBP8.58□□□□□ -1.04
CLRN3-201ENST00000368671 MRPL22Q9NWU5 206 aaKnown RBP8.58□□□□□ -1.04
CLRN3-201ENST00000368671 C1orf123Q9NWV4 160 aa8.58□□□□□ -1.04
CLRN3-201ENST00000368671 ADA2Q9NZK5 511 aa8.58□□□□□ -1.04
CLRN3-201ENST00000368671 PDP1Q9P0J1 537 aaPredicted RBP8.58□□□□□ -1.04
CLRN3-201ENST00000368671 ABCD2Q9UBJ2 740 aa8.58□□□□□ -1.04
CLRN3-201ENST00000368671 CYB5R1Q9UHQ9 305 aa8.58□□□□□ -1.04
CLRN3-201ENST00000368671 NOP16Q9Y3C1 178 aaKnown RBP8.58□□□□□ -1.04
CLRN3-201ENST00000368671 CENPVL3A0A0U1RRI6 287 aa8.57□□□□□ -1.04
CLRN3-201ENST00000368671 A0A1B0GUS0 222 aa8.57□□□□□ -1.04
CLRN3-201ENST00000368671 hCG_1807616A0A1W2PRN6 198 aa8.57□□□□□ -1.04
CLRN3-201ENST00000368671 C5orf63A6NC05 138 aa8.57□□□□□ -1.04
CLRN3-201ENST00000368671 OOEPA6NGQ2 149 aa8.57□□□□□ -1.04
CLRN3-201ENST00000368671 TVP23AA6NH52 213 aa8.57□□□□□ -1.04
CLRN3-201ENST00000368671 A6NLC8 198 aa8.57□□□□□ -1.04
CLRN3-201ENST00000368671 TNFRSF13BO14836 293 aaPredicted RBP8.57□□□□□ -1.04
CLRN3-201ENST00000368671 ARPC3O15145 178 aa8.57□□□□□ -1.04
CLRN3-201ENST00000368671 GMDSO60547 372 aa8.57□□□□□ -1.04
CLRN3-201ENST00000368671 GYPAP02724 150 aa8.57□□□□□ -1.04
CLRN3-201ENST00000368671 MMP9P14780 707 aa8.57□□□□□ -1.04
CLRN3-201ENST00000368671 ANOS1P23352 680 aa8.57□□□□□ -1.04
CLRN3-201ENST00000368671 PYCR1P32322 319 aa8.57□□□□□ -1.04
CLRN3-201ENST00000368671 SMIM11AP58511 58 aa8.57□□□□□ -1.04
CLRN3-201ENST00000368671 ZNF92Q03936 586 aa8.57□□□□□ -1.04
CLRN3-201ENST00000368671 GLYATL3Q5SZD4 288 aa8.57□□□□□ -1.04
CLRN3-201ENST00000368671 METTL11BQ5VVY1 283 aa8.57□□□□□ -1.04
CLRN3-201ENST00000368671 ZNF826PQ6ZT77 177 aa8.57□□□□□ -1.04
CLRN3-201ENST00000368671 SCCPDHQ8NBX0 429 aa8.57□□□□□ -1.04
CLRN3-201ENST00000368671 GATAD2BQ8WXI9 593 aa8.57□□□□□ -1.04
CLRN3-201ENST00000368671 LHX4Q969G2 390 aa8.57□□□□□ -1.04
CLRN3-201ENST00000368671 PYURFQ96I23 114 aa8.57□□□□□ -1.04
CLRN3-201ENST00000368671 FAM71F1Q96KD3 344 aaPredicted RBP8.57□□□□□ -1.04
CLRN3-201ENST00000368671 WDFY2Q96P53 400 aa8.57□□□□□ -1.04
CLRN3-201ENST00000368671 SLC22A4Q9H015 551 aa8.57□□□□□ -1.04
CLRN3-201ENST00000368671 SPAG4Q9NPE6 437 aa8.57□□□□□ -1.04
CLRN3-201ENST00000368671 ACOXLQ9NUZ1 547 aa8.57□□□□□ -1.04
CLRN3-201ENST00000368671 N6AMT1Q9Y5N5 214 aa8.57□□□□□ -1.04
CLRN3-201ENST00000368671 IGHV3OR15-7A0A075B7D8 119 aa8.56□□□□□ -1.04
CLRN3-201ENST00000368671 TRAV38-1A0A0B4J264 116 aa8.56□□□□□ -1.04
CLRN3-201ENST00000368671 IGHV1-69DA0A0B4J2H0 117 aa8.56□□□□□ -1.04
CLRN3-201ENST00000368671 CLPSL1A2RUU4 121 aa8.56□□□□□ -1.04
CLRN3-201ENST00000368671 NDUFA7O95182 113 aa8.56□□□□□ -1.04
CLRN3-201ENST00000368671 IGHV1-69P01742 117 aa8.56□□□□□ -1.04
CLRN3-201ENST00000368671 LIPFP07098 398 aa8.56□□□□□ -1.04
CLRN3-201ENST00000368671 SLC2A1P11166 492 aa8.56□□□□□ -1.04
CLRN3-201ENST00000368671 PSKH1P11801 424 aa8.56□□□□□ -1.04
CLRN3-201ENST00000368671 RRM2P31350 389 aa8.56□□□□□ -1.04
CLRN3-201ENST00000368671 IFNGR2P38484 337 aa8.56□□□□□ -1.04
CLRN3-201ENST00000368671 PRKXP51817 358 aa8.56□□□□□ -1.04
CLRN3-201ENST00000368671 KRTAP10-3P60369 221 aa8.56□□□□□ -1.04
CLRN3-201ENST00000368671 ARF6P62330 175 aa8.56□□□□□ -1.04
CLRN3-201ENST00000368671 PDCD1Q15116 288 aa8.56□□□□□ -1.04
CLRN3-201ENST00000368671 PDZD9Q8IXQ8 264 aa8.56□□□□□ -1.04
CLRN3-201ENST00000368671 TMEM86BQ8N661 226 aa8.56□□□□□ -1.04
CLRN3-201ENST00000368671 PNLDC1Q8NA58 520 aaKnown RBP8.56□□□□□ -1.04
CLRN3-201ENST00000368671 CYB561A3Q8NBI2 242 aa8.56□□□□□ -1.04
CLRN3-201ENST00000368671 PROKR2Q8NFJ6 384 aa8.56□□□□□ -1.04
CLRN3-201ENST00000368671 TBC1D15Q8TC07 691 aa8.56□□□□□ -1.04
CLRN3-201ENST00000368671 GNPDA2Q8TDQ7 276 aa8.56□□□□□ -1.04
CLRN3-201ENST00000368671 ST8SIA4Q92187 359 aa8.56□□□□□ -1.04
CLRN3-201ENST00000368671 MCUR1Q96AQ8 359 aa8.56□□□□□ -1.04
CLRN3-201ENST00000368671 CITED4Q96RK1 184 aa8.56□□□□□ -1.04
CLRN3-201ENST00000368671 CITED1Q99966 193 aa8.56□□□□□ -1.04
CLRN3-201ENST00000368671 COPS4Q9BT78 406 aa8.56□□□□□ -1.04
CLRN3-201ENST00000368671 TRIM15Q9C019 465 aa8.56□□□□□ -1.04
CLRN3-201ENST00000368671 SIRPDQ9H106 197 aa8.56□□□□□ -1.04
CLRN3-201ENST00000368671 CCDC134Q9H6E4 229 aa8.56□□□□□ -1.04
CLRN3-201ENST00000368671 EGLN3Q9H6Z9 239 aa8.56□□□□□ -1.04
CLRN3-201ENST00000368671 TRIM36Q9NQ86 728 aa8.56□□□□□ -1.04
CLRN3-201ENST00000368671 KCNG2Q9UJ96 466 aa8.56□□□□□ -1.04
CLRN3-201ENST00000368671 POMT1Q9Y6A1 747 aa8.56□□□□□ -1.04
CLRN3-201ENST00000368671 DOCK11Q5JSL3 2073 aa8.56□□□□□ -1.04
CLRN3-201ENST00000368671 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.55□□□□□ -1.04
CLRN3-201ENST00000368671 A0A0U1RQK1 487 aa8.55□□□□□ -1.04
CLRN3-201ENST00000368671 M0QZ24 198 aa8.55□□□□□ -1.04
CLRN3-201ENST00000368671 DVL1O14640 695 aa8.55□□□□□ -1.04
CLRN3-201ENST00000368671 TIMM23O14925 209 aa8.55□□□□□ -1.04
CLRN3-201ENST00000368671 TBX1O43435 398 aa8.55□□□□□ -1.04
CLRN3-201ENST00000368671 NDUFA2O43678 99 aa8.55□□□□□ -1.04
CLRN3-201ENST00000368671 IDH3BO43837 385 aa8.55□□□□□ -1.04
CLRN3-201ENST00000368671 FCN3O75636 299 aa8.55□□□□□ -1.04
CLRN3-201ENST00000368671 PTBP3O95758 552 aaKnown RBP8.55□□□□□ -1.04
CLRN3-201ENST00000368671 IGHV4-59P01825 116 aa8.55□□□□□ -1.04
CLRN3-201ENST00000368671 SEMG1P04279 462 aa8.55□□□□□ -1.04
CLRN3-201ENST00000368671 FABP3P05413 133 aa8.55□□□□□ -1.04
CLRN3-201ENST00000368671 SPARCP09486 303 aa8.55□□□□□ -1.04
CLRN3-201ENST00000368671 GSSP48637 474 aa8.55□□□□□ -1.04
CLRN3-201ENST00000368671 TSPAN31Q12999 210 aa8.55□□□□□ -1.04
CLRN3-201ENST00000368671 TAF13Q15543 124 aa8.55□□□□□ -1.04
CLRN3-201ENST00000368671 DRAM2Q6UX65 266 aa8.55□□□□□ -1.04
CLRN3-201ENST00000368671 ZNF620Q6ZNG0 422 aa8.55□□□□□ -1.04
CLRN3-201ENST00000368671 BTN2A1Q7KYR7 527 aa8.55□□□□□ -1.04
CLRN3-201ENST00000368671 DCXRQ7Z4W1 244 aa8.55□□□□□ -1.04
CLRN3-201ENST00000368671 FAM90A1Q86YD7 464 aa8.55□□□□□ -1.04
CLRN3-201ENST00000368671 FGFRL1Q8N441 504 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms