RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 C5orf63A6NC05 138 aa17.4■□□□□ 0.38
CD47-202ENST00000361309 OR6C68A6NDL8 312 aa17.4■□□□□ 0.38
CD47-202ENST00000361309 A6NLC8 198 aa17.4■□□□□ 0.38
CD47-202ENST00000361309 ECDO95905 644 aaPredicted RBP17.4■□□□□ 0.38
CD47-202ENST00000361309 SLC6A6P31641 620 aa17.4■□□□□ 0.38
CD47-202ENST00000361309 HDXQ7Z353 690 aa17.4■□□□□ 0.38
CD47-202ENST00000361309 VMO1Q7Z5L0 202 aa17.4■□□□□ 0.38
CD47-202ENST00000361309 FGFRL1Q8N441 504 aa17.4■□□□□ 0.38
CD47-202ENST00000361309 SDR9C7Q8NEX9 313 aa17.4■□□□□ 0.38
CD47-202ENST00000361309 ST8SIA4Q92187 359 aa17.4■□□□□ 0.38
CD47-202ENST00000361309 SPTSSAQ969W0 71 aa17.4■□□□□ 0.38
CD47-202ENST00000361309 C7orf34Q96L11 122 aa17.4■□□□□ 0.38
CD47-202ENST00000361309 DHRS1Q96LJ7 313 aa17.4■□□□□ 0.38
CD47-202ENST00000361309 HOPXQ9BPY8 73 aaPredicted RBP17.4■□□□□ 0.38
CD47-202ENST00000361309 FUZQ9BT04 418 aa17.4■□□□□ 0.38
CD47-202ENST00000361309 IFT27Q9BW83 186 aa17.4■□□□□ 0.38
CD47-202ENST00000361309 CNTD2Q9H8S5 307 aa17.4■□□□□ 0.38
CD47-202ENST00000361309 MRPL15Q9P015 296 aaKnown RBP17.4■□□□□ 0.38
CD47-202ENST00000361309 IGHV3OR15-7A0A075B7D8 119 aa17.39■□□□□ 0.37
CD47-202ENST00000361309 hCG_1807616A0A1W2PRN6 198 aa17.39■□□□□ 0.37
CD47-202ENST00000361309 SLC22A2O15244 555 aa17.39■□□□□ 0.37
CD47-202ENST00000361309 NOS3P29474 1203 aa17.39■□□□□ 0.37
CD47-202ENST00000361309 RPS27P42677 84 aaKnown RBP17.39■□□□□ 0.37
CD47-202ENST00000361309 C11orf91Q3C1V1 193 aa17.39■□□□□ 0.37
CD47-202ENST00000361309 CDONQ4KMG0 1287 aa17.39■□□□□ 0.37
CD47-202ENST00000361309 GLYATL3Q5SZD4 288 aa17.39■□□□□ 0.37
CD47-202ENST00000361309 C8orf82Q6P1X6 216 aaPredicted RBP17.39■□□□□ 0.37
CD47-202ENST00000361309 LRTOMTQ8WZ04 291 aa17.39■□□□□ 0.37
CD47-202ENST00000361309 KCTD14Q9BQ13 255 aaPredicted RBP17.39■□□□□ 0.37
CD47-202ENST00000361309 NSRP1Q9H0G5 558 aaKnown RBP17.39■□□□□ 0.37
CD47-202ENST00000361309 SEMA6AQ9H2E6 1030 aa17.39■□□□□ 0.37
CD47-202ENST00000361309 C16orf95Q9H693 158 aa17.39■□□□□ 0.37
CD47-202ENST00000361309 KAAG1Q9UBP8 84 aa17.39■□□□□ 0.37
CD47-202ENST00000361309 RPUSD1Q9UJJ7 312 aaKnown RBP17.39■□□□□ 0.37
CD47-202ENST00000361309 FAM96BQ9Y3D0 163 aa17.39■□□□□ 0.37
CD47-202ENST00000361309 PLXNB1O43157 2135 aa17.39■□□□□ 0.37
CD47-202ENST00000361309 LHBP01229 141 aa17.38■□□□□ 0.37
CD47-202ENST00000361309 COX4I1P13073 169 aa17.38■□□□□ 0.37
CD47-202ENST00000361309 KRT72Q14CN4 511 aa17.38■□□□□ 0.37
CD47-202ENST00000361309 TEX36Q5VZQ5 186 aa17.38■□□□□ 0.37
CD47-202ENST00000361309 DHRS7BQ6IAN0 325 aaPredicted RBP17.38■□□□□ 0.37
CD47-202ENST00000361309 LNX2Q8N448 690 aa17.38■□□□□ 0.37
CD47-202ENST00000361309 SPERTQ8NA61 448 aa17.38■□□□□ 0.37
CD47-202ENST00000361309 KCNG2Q9UJ96 466 aa17.38■□□□□ 0.37
CD47-202ENST00000361309 KPTNQ9Y664 436 aa17.38■□□□□ 0.37
CD47-202ENST00000361309 A0A1B0GVI7 797 aa17.37■□□□□ 0.37
CD47-202ENST00000361309 A0A1B0GW55 424 aa17.37■□□□□ 0.37
CD47-202ENST00000361309 DUX4L2P0CJ85 424 aa17.37■□□□□ 0.37
CD47-202ENST00000361309 DUX4L3P0CJ86 424 aa17.37■□□□□ 0.37
CD47-202ENST00000361309 DUX4L4P0CJ87 422 aa17.37■□□□□ 0.37
CD47-202ENST00000361309 DUX4L5P0CJ88 424 aa17.37■□□□□ 0.37
CD47-202ENST00000361309 DUX4L6P0CJ89 424 aa17.37■□□□□ 0.37
CD47-202ENST00000361309 DUX4L7P0CJ90 424 aa17.37■□□□□ 0.37
CD47-202ENST00000361309 ZNF823P16415 610 aa17.37■□□□□ 0.37
CD47-202ENST00000361309 ELF3P78545 371 aaPredicted RBP17.37■□□□□ 0.37
CD47-202ENST00000361309 C2orf68Q2NKX9 166 aa17.37■□□□□ 0.37
CD47-202ENST00000361309 DUX4L9Q6RFH8 374 aaPredicted RBP17.37■□□□□ 0.37
CD47-202ENST00000361309 DRAM2Q6UX65 266 aa17.37■□□□□ 0.37
CD47-202ENST00000361309 FAM86B1Q8N7N1 296 aa17.37■□□□□ 0.37
CD47-202ENST00000361309 OR56B2PQ8NGI1 322 aa17.37■□□□□ 0.37
CD47-202ENST00000361309 VIPAS39Q9H9C1 493 aa17.37■□□□□ 0.37
CD47-202ENST00000361309 ADA2Q9NZK5 511 aa17.37■□□□□ 0.37
CD47-202ENST00000361309 ONECUT1Q9UBC0 465 aa17.37■□□□□ 0.37
CD47-202ENST00000361309 DUX4Q9UBX2 424 aa17.37■□□□□ 0.37
CD47-202ENST00000361309 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.36■□□□□ 0.37
CD47-202ENST00000361309 BHLHE40O14503 412 aa17.36■□□□□ 0.37
CD47-202ENST00000361309 OTX1P32242 354 aaPredicted RBP17.36■□□□□ 0.37
CD47-202ENST00000361309 PYCR1P32322 319 aa17.36■□□□□ 0.37
CD47-202ENST00000361309 PRB3Q04118 309 aaPredicted RBP17.36■□□□□ 0.37
CD47-202ENST00000361309 MZT1Q08AG7 82 aa17.36■□□□□ 0.37
CD47-202ENST00000361309 SLC35F1Q5T1Q4 408 aa17.36■□□□□ 0.37
CD47-202ENST00000361309 LY6G5BQ8NDX9 201 aa17.36■□□□□ 0.37
CD47-202ENST00000361309 CCL13Q99616 98 aa17.36■□□□□ 0.37
CD47-202ENST00000361309 EFCAB1Q9HAE3 211 aa17.36■□□□□ 0.37
CD47-202ENST00000361309 C14orf119Q9NWQ9 140 aa17.36■□□□□ 0.37
CD47-202ENST00000361309 ZNRD1Q9P1U0 126 aa17.36■□□□□ 0.37
CD47-202ENST00000361309 N6AMT1Q9Y5N5 214 aa17.36■□□□□ 0.37
CD47-202ENST00000361309 ZNF816-ZNF321PA0A0X1KG74 233 aa17.35■□□□□ 0.37
CD47-202ENST00000361309 BTBD17A6NE02 478 aa17.35■□□□□ 0.37
CD47-202ENST00000361309 TVP23AA6NH52 213 aa17.35■□□□□ 0.37
CD47-202ENST00000361309 IDH3BO43837 385 aa17.35■□□□□ 0.37
CD47-202ENST00000361309 TSPAN9O75954 239 aa17.35■□□□□ 0.37
CD47-202ENST00000361309 FBP1P09467 338 aa17.35■□□□□ 0.37
CD47-202ENST00000361309 PSKH1P11801 424 aa17.35■□□□□ 0.37
CD47-202ENST00000361309 EGR3Q06889 387 aa17.35■□□□□ 0.37
CD47-202ENST00000361309 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.35■□□□□ 0.37
CD47-202ENST00000361309 PCK2Q16822 640 aa17.35■□□□□ 0.37
CD47-202ENST00000361309 GLYATQ6IB77 296 aa17.35■□□□□ 0.37
CD47-202ENST00000361309 C11orf53Q8IXP5 236 aa17.35■□□□□ 0.37
CD47-202ENST00000361309 NPRL2Q8WTW4 380 aa17.35■□□□□ 0.37
CD47-202ENST00000361309 SIRT7Q9NRC8 400 aa17.35■□□□□ 0.37
CD47-202ENST00000361309 DCAF13Q9NV06 445 aaKnown RBP17.35■□□□□ 0.37
CD47-202ENST00000361309 VPREB3Q9UKI3 123 aa17.35■□□□□ 0.37
CD47-202ENST00000361309 CAB39Q9Y376 341 aaPredicted RBP17.35■□□□□ 0.37
CD47-202ENST00000361309 NDUFAB1O14561 156 aa17.34■□□□□ 0.37
CD47-202ENST00000361309 GADD45GO95257 159 aa17.34■□□□□ 0.37
CD47-202ENST00000361309 CSF1P09603 554 aa17.34■□□□□ 0.37
CD47-202ENST00000361309 SLC2A1P11166 492 aa17.34■□□□□ 0.37
CD47-202ENST00000361309 NUDT2P50583 147 aa17.34■□□□□ 0.37
CD47-202ENST00000361309 PRKXP51817 358 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms