RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 NHLH1Q02575 133 aa14.53□□□□□ -0.08
COL18A1-203ENST00000359759 NHLH2Q02577 135 aa14.53□□□□□ -0.08
COL18A1-203ENST00000359759 PRDX4Q13162 271 aa14.53□□□□□ -0.08
COL18A1-203ENST00000359759 UBE3DQ7Z6J8 389 aa14.53□□□□□ -0.08
COL18A1-203ENST00000359759 OR5V1Q9UGF6 321 aa14.53□□□□□ -0.08
COL18A1-203ENST00000359759 RBP4P02753 201 aa14.53□□□□□ -0.08
COL18A1-203ENST00000359759 RANP62826 216 aaKnown RBP14.53□□□□□ -0.08
COL18A1-203ENST00000359759 GPNMBQ14956 572 aa14.53□□□□□ -0.08
COL18A1-203ENST00000359759 RNASEK-C17orf49H0YIS7 233 aa14.53□□□□□ -0.08
COL18A1-203ENST00000359759 EIF4E2O60573 245 aaKnown RBP14.53□□□□□ -0.08
COL18A1-203ENST00000359759 GPM6AP51674 278 aa14.53□□□□□ -0.08
COL18A1-203ENST00000359759 PPIAP62937 165 aaKnown RBP14.53□□□□□ -0.08
COL18A1-203ENST00000359759 ZDHHC23Q8IYP9 409 aa14.53□□□□□ -0.08
COL18A1-203ENST00000359759 OR52N4Q8NGI2 321 aa14.53□□□□□ -0.08
COL18A1-203ENST00000359759 SARGQ9BW04 601 aa14.53□□□□□ -0.08
COL18A1-203ENST00000359759 LYRM4Q9HD34 91 aa14.53□□□□□ -0.08
COL18A1-203ENST00000359759 NDRG4Q9ULP0 352 aaKnown RBP14.53□□□□□ -0.08
COL18A1-203ENST00000359759 R4GMQ9 66 aa14.53□□□□□ -0.08
COL18A1-203ENST00000359759 HSBP1O75506 76 aa14.53□□□□□ -0.08
COL18A1-203ENST00000359759 OR5H8P0DN80 308 aa14.53□□□□□ -0.08
COL18A1-203ENST00000359759 S100A4P26447 101 aaKnown RBP14.53□□□□□ -0.08
COL18A1-203ENST00000359759 ZNF121P58317 390 aaPredicted RBP14.53□□□□□ -0.08
COL18A1-203ENST00000359759 MIDNQ504T8 468 aa14.53□□□□□ -0.08
COL18A1-203ENST00000359759 DGAT2L6Q6ZPD8 337 aa14.53□□□□□ -0.08
COL18A1-203ENST00000359759 TGIF2LXQ8IUE1 241 aa14.53□□□□□ -0.08
COL18A1-203ENST00000359759 SPNS2Q8IVW8 549 aa14.53□□□□□ -0.08
COL18A1-203ENST00000359759 CLRN3Q8NCR9 226 aa14.53□□□□□ -0.08
COL18A1-203ENST00000359759 OR52N5Q8NH56 324 aa14.53□□□□□ -0.08
COL18A1-203ENST00000359759 PATE1Q8WXA2 126 aa14.53□□□□□ -0.08
COL18A1-203ENST00000359759 MOB3AQ96BX8 217 aa14.53□□□□□ -0.08
COL18A1-203ENST00000359759 RBM14Q96PK6 669 aaKnown RBP14.53□□□□□ -0.08
COL18A1-203ENST00000359759 MENTQ9BUN1 341 aa14.53□□□□□ -0.08
COL18A1-203ENST00000359759 IFITM5A6NNB3 132 aa14.52□□□□□ -0.08
COL18A1-203ENST00000359759 NCBP2LA6PVI3 153 aaKnown RBP14.52□□□□□ -0.08
COL18A1-203ENST00000359759 SPINK9Q5DT21 86 aa14.52□□□□□ -0.08
COL18A1-203ENST00000359759 SPNS3Q6ZMD2 512 aa14.52□□□□□ -0.08
COL18A1-203ENST00000359759 UBALD1Q8TB05 177 aa14.52□□□□□ -0.08
COL18A1-203ENST00000359759 NAGKQ9UJ70 344 aa14.52□□□□□ -0.08
COL18A1-203ENST00000359759 ZAR1LA6NP61 321 aa14.52□□□□□ -0.08
COL18A1-203ENST00000359759 IRS1P35568 1242 aa14.52□□□□□ -0.08
COL18A1-203ENST00000359759 FAM162BQ5T6X4 162 aa14.52□□□□□ -0.08
COL18A1-203ENST00000359759 C17orf99Q6UX52 265 aa14.52□□□□□ -0.08
COL18A1-203ENST00000359759 CXorf67Q86X51 503 aaPredicted RBP14.52□□□□□ -0.08
COL18A1-203ENST00000359759 ZNF573Q86YE8 665 aa14.52□□□□□ -0.08
COL18A1-203ENST00000359759 OR2T6Q8NHC8 308 aa14.52□□□□□ -0.08
COL18A1-203ENST00000359759 EDAQ92838 391 aa14.52□□□□□ -0.08
COL18A1-203ENST00000359759 RHNO1Q9BSD3 238 aa14.52□□□□□ -0.08
COL18A1-203ENST00000359759 TMPRSS13Q9BYE2 586 aa14.52□□□□□ -0.08
COL18A1-203ENST00000359759 NID1P14543 1247 aa14.52□□□□□ -0.08
COL18A1-203ENST00000359759 HIST1H3AP68431 136 aa14.52□□□□□ -0.08
COL18A1-203ENST00000359759 MAMSTRQ6ZN01 415 aa14.52□□□□□ -0.08
COL18A1-203ENST00000359759 SLC38A6Q8IZM9 456 aa14.52□□□□□ -0.08
COL18A1-203ENST00000359759 IFI44Q8TCB0 444 aa14.52□□□□□ -0.08
COL18A1-203ENST00000359759 MAP6Q96JE9 813 aa14.52□□□□□ -0.08
COL18A1-203ENST00000359759 GABARAPL3Q9BY60 117 aa14.52□□□□□ -0.08
COL18A1-203ENST00000359759 ST3GAL6Q9Y274 331 aa14.52□□□□□ -0.08
COL18A1-203ENST00000359759 EVX1P49640 407 aa14.52□□□□□ -0.09
COL18A1-203ENST00000359759 EGR3Q06889 387 aa14.52□□□□□ -0.09
COL18A1-203ENST00000359759 ZNF66Q6ZN08 573 aa14.52□□□□□ -0.09
COL18A1-203ENST00000359759 VASH2Q86V25 355 aa14.52□□□□□ -0.09
COL18A1-203ENST00000359759 SLC37A2Q8TED4 501 aa14.52□□□□□ -0.09
COL18A1-203ENST00000359759 POM121Q96HA1 1249 aa14.52□□□□□ -0.09
COL18A1-203ENST00000359759 DERL3Q96Q80 235 aa14.52□□□□□ -0.09
COL18A1-203ENST00000359759 MEX3AA1L020 520 aaKnown RBP14.52□□□□□ -0.09
COL18A1-203ENST00000359759 TTRP02766 147 aa14.52□□□□□ -0.09
COL18A1-203ENST00000359759 OPN1MWP04001 364 aa14.52□□□□□ -0.09
COL18A1-203ENST00000359759 OPN1MW2P0DN77 364 aa14.52□□□□□ -0.09
COL18A1-203ENST00000359759 OPN1MW3P0DN78 364 aa14.52□□□□□ -0.09
COL18A1-203ENST00000359759 ARR3P36575 388 aa14.52□□□□□ -0.09
COL18A1-203ENST00000359759 ADGRG7Q96K78 797 aa14.52□□□□□ -0.09
COL18A1-203ENST00000359759 OR2A14Q96R47 310 aa14.52□□□□□ -0.09
COL18A1-203ENST00000359759 TBC1D29Q9UFV1 150 aa14.52□□□□□ -0.09
COL18A1-203ENST00000359759 NDRG3Q9UGV2 375 aa14.52□□□□□ -0.09
COL18A1-203ENST00000359759 A0A1B0GUH1 482 aa14.51□□□□□ -0.09
COL18A1-203ENST00000359759 FGF17O60258 216 aa14.51□□□□□ -0.09
COL18A1-203ENST00000359759 AGERQ15109 404 aa14.51□□□□□ -0.09
COL18A1-203ENST00000359759 FAM27D1Q5T7N8 215 aa14.51□□□□□ -0.09
COL18A1-203ENST00000359759 C6orf15Q6UXA7 325 aaPredicted RBP14.51□□□□□ -0.09
COL18A1-203ENST00000359759 CPEB3Q8NE35 698 aaKnown RBP14.51□□□□□ -0.09
COL18A1-203ENST00000359759 NXPE3Q969Y0 559 aa14.51□□□□□ -0.09
COL18A1-203ENST00000359759 KIAA1324LA8MWY0 1029 aaPredicted RBP14.51□□□□□ -0.09
COL18A1-203ENST00000359759 GNG10P50151 68 aa14.51□□□□□ -0.09
COL18A1-203ENST00000359759 TEX261Q6UWH6 196 aa14.51□□□□□ -0.09
COL18A1-203ENST00000359759 MZB1Q8WU39 189 aa14.51□□□□□ -0.09
COL18A1-203ENST00000359759 ROBO4Q8WZ75 1007 aa14.51□□□□□ -0.09
COL18A1-203ENST00000359759 SMIM12Q96EX1 92 aa14.51□□□□□ -0.09
COL18A1-203ENST00000359759 DUS3LQ96G46 650 aaKnown RBP14.51□□□□□ -0.09
COL18A1-203ENST00000359759 SLC25A37Q9NYZ2 338 aa14.51□□□□□ -0.09
COL18A1-203ENST00000359759 U3KQ87 197 aa14.51□□□□□ -0.09
COL18A1-203ENST00000359759 ZNF207O43670 478 aaKnown RBP14.51□□□□□ -0.09
COL18A1-203ENST00000359759 DHODHQ02127 395 aa14.51□□□□□ -0.09
COL18A1-203ENST00000359759 LINC00303Q3SY05 128 aa14.51□□□□□ -0.09
COL18A1-203ENST00000359759 SLC25A26Q70HW3 274 aa14.51□□□□□ -0.09
COL18A1-203ENST00000359759 MOB3BQ86TA1 216 aa14.51□□□□□ -0.09
COL18A1-203ENST00000359759 LRP11Q86VZ4 500 aa14.51□□□□□ -0.09
COL18A1-203ENST00000359759 SIRT3Q9NTG7 399 aaPredicted RBP14.51□□□□□ -0.09
COL18A1-203ENST00000359759 DNAJC25-GNG10A0A024R161 153 aa14.51□□□□□ -0.09
COL18A1-203ENST00000359759 TEX50A0A1B0GTY4 177 aa14.51□□□□□ -0.09
COL18A1-203ENST00000359759 SP6Q3SY56 376 aa14.51□□□□□ -0.09
COL18A1-203ENST00000359759 AFMIDQ63HM1 303 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms