RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 FIGNL2A6NMB9 653 aa11.66□□□□□ -0.54
SMC4-202ENST00000357388 NDUFB6O95139 128 aa11.66□□□□□ -0.54
SMC4-202ENST00000357388 NDUFB7P17568 137 aa11.66□□□□□ -0.54
SMC4-202ENST00000357388 COL9A2Q14055 689 aaPredicted RBP11.66□□□□□ -0.54
SMC4-202ENST00000357388 TMEM52BQ4KMG9 183 aa11.66□□□□□ -0.54
SMC4-202ENST00000357388 MRM1Q6IN84 353 aaKnown RBP11.66□□□□□ -0.54
SMC4-202ENST00000357388 Q6ZN92 141 aa11.66□□□□□ -0.54
SMC4-202ENST00000357388 TMEM37Q8WXS4 190 aa11.66□□□□□ -0.54
SMC4-202ENST00000357388 RAB24Q969Q5 203 aa11.66□□□□□ -0.54
SMC4-202ENST00000357388 SHISA4Q96DD7 197 aa11.66□□□□□ -0.54
SMC4-202ENST00000357388 CHST6Q9GZX3 395 aa11.66□□□□□ -0.54
SMC4-202ENST00000357388 PRO1933Q9H354 126 aa11.66□□□□□ -0.54
SMC4-202ENST00000357388 CHST11Q9NPF2 352 aa11.66□□□□□ -0.54
SMC4-202ENST00000357388 CLEC18AA5D8T8 446 aa11.66□□□□□ -0.54
SMC4-202ENST00000357388 DEDDO75618 318 aa11.66□□□□□ -0.54
SMC4-202ENST00000357388 PGA3P0DJD8 388 aa11.66□□□□□ -0.54
SMC4-202ENST00000357388 RPL24P83731 157 aaKnown RBP11.66□□□□□ -0.54
SMC4-202ENST00000357388 CLEC18CQ8NCF0 446 aa11.66□□□□□ -0.54
SMC4-202ENST00000357388 EDARADDQ8WWZ3 215 aa11.66□□□□□ -0.54
SMC4-202ENST00000357388 COMMD5Q9GZQ3 224 aa11.66□□□□□ -0.54
SMC4-202ENST00000357388 TIMM10BQ9Y5J6 103 aa11.66□□□□□ -0.54
SMC4-202ENST00000357388 LRRC3CA6NJW4 275 aa11.66□□□□□ -0.54
SMC4-202ENST00000357388 ST8SIA5O15466 376 aa11.66□□□□□ -0.54
SMC4-202ENST00000357388 ZNF628Q5EBL2 1059 aa11.66□□□□□ -0.54
SMC4-202ENST00000357388 OR4S1Q8NGB4 309 aa11.66□□□□□ -0.54
SMC4-202ENST00000357388 ANAPC16Q96DE5 110 aa11.66□□□□□ -0.54
SMC4-202ENST00000357388 PPP1R3CQ9UQK1 317 aa11.66□□□□□ -0.54
SMC4-202ENST00000357388 ZNF835Q9Y2P0 537 aa11.66□□□□□ -0.54
SMC4-202ENST00000357388 MYH8P13535 1937 aa11.66□□□□□ -0.54
SMC4-202ENST00000357388 ANKRD26Q9UPS8 1709 aa11.66□□□□□ -0.54
SMC4-202ENST00000357388 OR5AL1P0C617 328 aa11.66□□□□□ -0.54
SMC4-202ENST00000357388 IAPPP10997 89 aa11.66□□□□□ -0.54
SMC4-202ENST00000357388 PPOXP50336 477 aa11.66□□□□□ -0.54
SMC4-202ENST00000357388 ELOBQ15370 118 aa11.66□□□□□ -0.54
SMC4-202ENST00000357388 SHHQ15465 462 aa11.66□□□□□ -0.54
SMC4-202ENST00000357388 ABHD17CQ6PCB6 329 aa11.66□□□□□ -0.54
SMC4-202ENST00000357388 GPR137Q96N19 417 aa11.66□□□□□ -0.54
SMC4-202ENST00000357388 PHF7Q9BWX1 381 aaPredicted RBP11.66□□□□□ -0.54
SMC4-202ENST00000357388 S1PR5Q9H228 398 aa11.66□□□□□ -0.54
SMC4-202ENST00000357388 DHCR7Q9UBM7 475 aaKnown RBP11.66□□□□□ -0.54
SMC4-202ENST00000357388 CTSFQ9UBX1 484 aa11.66□□□□□ -0.54
SMC4-202ENST00000357388 RALYQ9UKM9 306 aaKnown RBP11.66□□□□□ -0.54
SMC4-202ENST00000357388 ORM1P02763 201 aa11.66□□□□□ -0.54
SMC4-202ENST00000357388 TRNP1Q6NT89 227 aa11.66□□□□□ -0.54
SMC4-202ENST00000357388 UBE2FQ969M7 185 aa11.66□□□□□ -0.54
SMC4-202ENST00000357388 ZC3HAV1LQ96H79 300 aaKnown RBP11.66□□□□□ -0.54
SMC4-202ENST00000357388 MENTQ9BUN1 341 aa11.66□□□□□ -0.54
SMC4-202ENST00000357388 P2RY12Q9H244 342 aa11.66□□□□□ -0.54
SMC4-202ENST00000357388 CYSLTR2Q9NS75 346 aa11.66□□□□□ -0.54
SMC4-202ENST00000357388 PROCRQ9UNN8 238 aa11.66□□□□□ -0.54
SMC4-202ENST00000357388 TMED3Q9Y3Q3 217 aa11.66□□□□□ -0.54
SMC4-202ENST00000357388 ATP23Q9Y6H3 246 aa11.66□□□□□ -0.54
SMC4-202ENST00000357388 SLCO2B1O94956 709 aa11.65□□□□□ -0.54
SMC4-202ENST00000357388 SULT1A3P0DMM9 295 aa11.65□□□□□ -0.54
SMC4-202ENST00000357388 SULT1A4P0DMN0 295 aa11.65□□□□□ -0.54
SMC4-202ENST00000357388 EPXP11678 715 aa11.65□□□□□ -0.54
SMC4-202ENST00000357388 SLC6A1P30531 599 aa11.65□□□□□ -0.54
SMC4-202ENST00000357388 OR10J1P30954 320 aa11.65□□□□□ -0.54
SMC4-202ENST00000357388 LINC00303Q3SY05 128 aa11.65□□□□□ -0.54
SMC4-202ENST00000357388 TRMT12Q53H54 448 aaKnown RBP11.65□□□□□ -0.54
SMC4-202ENST00000357388 SOWAHCQ53LP3 525 aaPredicted RBP11.65□□□□□ -0.54
SMC4-202ENST00000357388 MTURNQ8N3F0 131 aa11.65□□□□□ -0.54
SMC4-202ENST00000357388 GPR87Q9BY21 358 aa11.65□□□□□ -0.54
SMC4-202ENST00000357388 ADGRL4Q9HBW9 690 aa11.65□□□□□ -0.54
SMC4-202ENST00000357388 UBR1Q8IWV7 1749 aa11.65□□□□□ -0.54
SMC4-202ENST00000357388 MYH10P35580 1976 aa11.65□□□□□ -0.54
SMC4-202ENST00000357388 G3V3Y1 287 aa11.65□□□□□ -0.54
SMC4-202ENST00000357388 CD200P41217 278 aa11.65□□□□□ -0.54
SMC4-202ENST00000357388 DUSP8Q13202 625 aa11.65□□□□□ -0.54
SMC4-202ENST00000357388 OR2A2Q6IF42 318 aa11.65□□□□□ -0.54
SMC4-202ENST00000357388 MYPOPQ86VE0 399 aaPredicted RBP11.65□□□□□ -0.54
SMC4-202ENST00000357388 GPR32P1Q8NGA4 272 aa11.65□□□□□ -0.54
SMC4-202ENST00000357388 ERGIC1Q969X5 290 aa11.65□□□□□ -0.54
SMC4-202ENST00000357388 SIRT3Q9NTG7 399 aaPredicted RBP11.65□□□□□ -0.54
SMC4-202ENST00000357388 TAPBPO15533 448 aa11.65□□□□□ -0.54
SMC4-202ENST00000357388 MBTPS2O43462 519 aa11.65□□□□□ -0.54
SMC4-202ENST00000357388 APEHP13798 732 aaKnown RBP11.65□□□□□ -0.54
SMC4-202ENST00000357388 BMP5P22003 454 aa11.65□□□□□ -0.54
SMC4-202ENST00000357388 EDDM3AQ14507 147 aa11.65□□□□□ -0.54
SMC4-202ENST00000357388 EIF4E3Q8N5X7 224 aaKnown RBP11.65□□□□□ -0.54
SMC4-202ENST00000357388 OR51E1Q8TCB6 317 aa11.65□□□□□ -0.54
SMC4-202ENST00000357388 NPAS1Q99742 590 aa11.65□□□□□ -0.54
SMC4-202ENST00000357388 TCHHQ07283 1943 aa11.65□□□□□ -0.54
SMC4-202ENST00000357388 POM121BA6NF01 834 aa11.65□□□□□ -0.55
SMC4-202ENST00000357388 ZNF749O43361 778 aa11.65□□□□□ -0.55
SMC4-202ENST00000357388 ARR3P36575 388 aa11.65□□□□□ -0.55
SMC4-202ENST00000357388 RGRP47804 291 aa11.65□□□□□ -0.55
SMC4-202ENST00000357388 NKAIN4Q8IVV8 208 aa11.65□□□□□ -0.55
SMC4-202ENST00000357388 AUNIPQ9H7T9 357 aa11.65□□□□□ -0.55
SMC4-202ENST00000357388 BCL2L10Q9HD36 194 aa11.65□□□□□ -0.55
SMC4-202ENST00000357388 HS3ST1O14792 307 aa11.64□□□□□ -0.55
SMC4-202ENST00000357388 SPNP16150 400 aa11.64□□□□□ -0.55
SMC4-202ENST00000357388 AQP6Q13520 282 aa11.64□□□□□ -0.55
SMC4-202ENST00000357388 OR8G1Q15617 311 aa11.64□□□□□ -0.55
SMC4-202ENST00000357388 ELAVL1Q15717 326 aaKnown RBP11.64□□□□□ -0.55
SMC4-202ENST00000357388 AFMIDQ63HM1 303 aa11.64□□□□□ -0.55
SMC4-202ENST00000357388 ACSM5Q6NUN0 579 aa11.64□□□□□ -0.55
SMC4-202ENST00000357388 ARIH2OSQ8N7S6 290 aa11.64□□□□□ -0.55
SMC4-202ENST00000357388 SMIM12Q96EX1 92 aa11.64□□□□□ -0.55
SMC4-202ENST00000357388 RAB40CQ96S21 281 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms