RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 SOX15O60248 233 aa6.82□□□□□ -1.32
BRCA1-201ENST00000352993 RAMP1O60894 148 aa6.82□□□□□ -1.32
BRCA1-201ENST00000352993 APBB3O95704 486 aa6.82□□□□□ -1.32
BRCA1-201ENST00000352993 ADH1CP00326 375 aa6.82□□□□□ -1.32
BRCA1-201ENST00000352993 GLI4P10075 376 aa6.82□□□□□ -1.32
BRCA1-201ENST00000352993 CRABP1P29762 137 aa6.82□□□□□ -1.32
BRCA1-201ENST00000352993 PEBP1P30086 187 aaKnown RBP6.82□□□□□ -1.32
BRCA1-201ENST00000352993 PMELP40967 661 aa6.82□□□□□ -1.32
BRCA1-201ENST00000352993 AFF3P51826 1226 aaKnown RBP6.82□□□□□ -1.32
BRCA1-201ENST00000352993 CSNK2A1P68400 391 aaPredicted RBP6.82□□□□□ -1.32
BRCA1-201ENST00000352993 UBE2V2Q15819 145 aa6.82□□□□□ -1.32
BRCA1-201ENST00000352993 HIST2H3PS2Q5TEC6 136 aa6.82□□□□□ -1.32
BRCA1-201ENST00000352993 OPN5Q6U736 354 aa6.82□□□□□ -1.32
BRCA1-201ENST00000352993 FAM180AQ6UWF9 173 aa6.82□□□□□ -1.32
BRCA1-201ENST00000352993 HEPN1Q6WQI6 88 aa6.82□□□□□ -1.32
BRCA1-201ENST00000352993 P4HA3Q7Z4N8 544 aa6.82□□□□□ -1.32
BRCA1-201ENST00000352993 GKN2Q86XP6 184 aa6.82□□□□□ -1.32
BRCA1-201ENST00000352993 LINC00346Q8IVM7 164 aa6.82□□□□□ -1.32
BRCA1-201ENST00000352993 CSNK2A3Q8NEV1 391 aa6.82□□□□□ -1.32
BRCA1-201ENST00000352993 TMEM68Q96MH6 324 aa6.82□□□□□ -1.32
BRCA1-201ENST00000352993 ASB16Q96NS5 453 aa6.82□□□□□ -1.32
BRCA1-201ENST00000352993 TSPAN32Q96QS1 320 aa6.82□□□□□ -1.32
BRCA1-201ENST00000352993 RARRES2Q99969 163 aa6.82□□□□□ -1.32
BRCA1-201ENST00000352993 C8orf33Q9H7E9 229 aaPredicted RBP6.82□□□□□ -1.32
BRCA1-201ENST00000352993 LMAN1LQ9HAT1 526 aa6.82□□□□□ -1.32
BRCA1-201ENST00000352993 Q9N2J8 555 aa6.82□□□□□ -1.32
BRCA1-201ENST00000352993 PHPT1Q9NRX4 125 aaPredicted RBP6.82□□□□□ -1.32
BRCA1-201ENST00000352993 C14orf166Q9Y224 244 aaKnown RBP6.82□□□□□ -1.32
BRCA1-201ENST00000352993 MRPS2Q9Y399 296 aaKnown RBP6.82□□□□□ -1.32
BRCA1-201ENST00000352993 FANCMQ8IYD8 2048 aa6.82□□□□□ -1.32
BRCA1-201ENST00000352993 TGIF2-C20orf24A0A0A6YYL0 155 aa6.81□□□□□ -1.32
BRCA1-201ENST00000352993 ZNF878C9JN71 531 aa6.81□□□□□ -1.32
BRCA1-201ENST00000352993 PRAMEF26H0Y7S4 382 aa6.81□□□□□ -1.32
BRCA1-201ENST00000352993 XRCC2O43543 280 aa6.81□□□□□ -1.32
BRCA1-201ENST00000352993 SOD3P08294 240 aa6.81□□□□□ -1.32
BRCA1-201ENST00000352993 ZNF823P16415 610 aa6.81□□□□□ -1.32
BRCA1-201ENST00000352993 CXCR1P25024 350 aa6.81□□□□□ -1.32
BRCA1-201ENST00000352993 MESP2Q0VG99 397 aa6.81□□□□□ -1.32
BRCA1-201ENST00000352993 ZNF74Q16587 644 aa6.81□□□□□ -1.32
BRCA1-201ENST00000352993 GGNBP1Q5YKI7 109 aa6.81□□□□□ -1.32
BRCA1-201ENST00000352993 ASPHD2Q6ICH7 369 aa6.81□□□□□ -1.32
BRCA1-201ENST00000352993 ANGPTL5Q86XS5 388 aa6.81□□□□□ -1.32
BRCA1-201ENST00000352993 AQP3Q92482 292 aa6.81□□□□□ -1.32
BRCA1-201ENST00000352993 PACRGQ96M98 296 aaPredicted RBP6.81□□□□□ -1.32
BRCA1-201ENST00000352993 CCDC3Q9BQI4 270 aa6.81□□□□□ -1.32
BRCA1-201ENST00000352993 NICN1Q9BSH3 213 aa6.81□□□□□ -1.32
BRCA1-201ENST00000352993 EHFQ9NZC4 300 aa6.81□□□□□ -1.32
BRCA1-201ENST00000352993 PLA2G2EQ9NZK7 142 aa6.81□□□□□ -1.32
BRCA1-201ENST00000352993 CYP8B1Q9UNU6 501 aa6.81□□□□□ -1.32
BRCA1-201ENST00000352993 RCL1Q9Y2P8 373 aaKnown RBP6.81□□□□□ -1.32
BRCA1-201ENST00000352993 KCNIP3Q9Y2W7 256 aa6.81□□□□□ -1.32
BRCA1-201ENST00000352993 HCFC2Q9Y5Z7 792 aa6.81□□□□□ -1.32
BRCA1-201ENST00000352993 TMEM269A0A1B0GVZ9 245 aa6.81□□□□□ -1.32
BRCA1-201ENST00000352993 SERINC4A6NH21 518 aa6.81□□□□□ -1.32
BRCA1-201ENST00000352993 ADAM10O14672 748 aa6.81□□□□□ -1.32
BRCA1-201ENST00000352993 NUDT21O43809 227 aaKnown RBP6.81□□□□□ -1.32
BRCA1-201ENST00000352993 JMJD7P0C870 316 aa6.81□□□□□ -1.32
BRCA1-201ENST00000352993 PVRP15151 417 aa6.81□□□□□ -1.32
BRCA1-201ENST00000352993 KLK2P20151 261 aa6.81□□□□□ -1.32
BRCA1-201ENST00000352993 LSM6P62312 80 aaKnown RBP6.81□□□□□ -1.32
BRCA1-201ENST00000352993 SLC35A1P78382 337 aa6.81□□□□□ -1.32
BRCA1-201ENST00000352993 TOMM20Q15388 145 aa6.81□□□□□ -1.32
BRCA1-201ENST00000352993 PRICKLE4Q2TBC4 344 aa6.81□□□□□ -1.32
BRCA1-201ENST00000352993 HOGA1Q86XE5 327 aa6.81□□□□□ -1.32
BRCA1-201ENST00000352993 C19orf47Q8N9M1 422 aaKnown RBP6.81□□□□□ -1.32
BRCA1-201ENST00000352993 APCDD1LQ8NCL9 501 aa6.81□□□□□ -1.32
BRCA1-201ENST00000352993 KREMEN2Q8NCW0 462 aa6.81□□□□□ -1.32
BRCA1-201ENST00000352993 OR52N4Q8NGI2 321 aa6.81□□□□□ -1.32
BRCA1-201ENST00000352993 KTI12Q96EK9 354 aaPredicted RBP6.81□□□□□ -1.32
BRCA1-201ENST00000352993 BCO1Q9HAY6 547 aa6.81□□□□□ -1.32
BRCA1-201ENST00000352993 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.81□□□□□ -1.32
BRCA1-201ENST00000352993 LRP12Q9Y561 859 aa6.81□□□□□ -1.32
BRCA1-201ENST00000352993 ASCC3Q8N3C0 2202 aaKnown RBP6.81□□□□□ -1.32
BRCA1-201ENST00000352993 LAMA3Q16787 3333 aa6.81□□□□□ -1.32
BRCA1-201ENST00000352993 EML5Q05BV3 1969 aa6.81□□□□□ -1.32
BRCA1-201ENST00000352993 RTTNQ86VV8 2226 aa6.81□□□□□ -1.32
BRCA1-201ENST00000352993 HIST1H2BKO60814 126 aa6.81□□□□□ -1.32
BRCA1-201ENST00000352993 SCAF4O95104 1147 aaKnown RBP6.81□□□□□ -1.32
BRCA1-201ENST00000352993 MPZL1O95297 269 aa6.81□□□□□ -1.32
BRCA1-201ENST00000352993 DIRAS3O95661 229 aa6.81□□□□□ -1.32
BRCA1-201ENST00000352993 MBP02144 154 aa6.81□□□□□ -1.32
BRCA1-201ENST00000352993 HIST1H2BJP06899 126 aa6.81□□□□□ -1.32
BRCA1-201ENST00000352993 MDKP21741 143 aaPredicted RBP6.81□□□□□ -1.32
BRCA1-201ENST00000352993 HIST1H2BOP23527 126 aa6.81□□□□□ -1.32
BRCA1-201ENST00000352993 HIST1H2BBP33778 126 aa6.81□□□□□ -1.32
BRCA1-201ENST00000352993 PPP1CCP36873 323 aaKnown RBP6.81□□□□□ -1.32
BRCA1-201ENST00000352993 P2RY2P41231 377 aa6.81□□□□□ -1.32
BRCA1-201ENST00000352993 DHPSP49366 369 aaPredicted RBP6.81□□□□□ -1.32
BRCA1-201ENST00000352993 HIST1H2BDP58876 126 aa6.81□□□□□ -1.32
BRCA1-201ENST00000352993 HIST1H2BCP62807 126 aa6.81□□□□□ -1.32
BRCA1-201ENST00000352993 PSG6Q00889 435 aa6.81□□□□□ -1.32
BRCA1-201ENST00000352993 ELAVL3Q14576 367 aaKnown RBP6.81□□□□□ -1.32
BRCA1-201ENST00000352993 DHCR24Q15392 516 aa6.81□□□□□ -1.32
BRCA1-201ENST00000352993 HIST2H2BEQ16778 126 aa6.81□□□□□ -1.32
BRCA1-201ENST00000352993 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.81□□□□□ -1.32
BRCA1-201ENST00000352993 PHF19Q5T6S3 580 aa6.81□□□□□ -1.32
BRCA1-201ENST00000352993 DGAT2L6Q6ZPD8 337 aa6.81□□□□□ -1.32
BRCA1-201ENST00000352993 HIST1H2BHQ93079 126 aa6.81□□□□□ -1.32
BRCA1-201ENST00000352993 ERGIC1Q969X5 290 aa6.81□□□□□ -1.32
BRCA1-201ENST00000352993 THOC3Q96J01 351 aaKnown RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms