RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 ZNF679Q8IYX0 411 aa18.66■□□□□ 0.58
SNX3-202ENST00000349379 CELF2-AS1Q8N7Q2 184 aa18.66■□□□□ 0.58
SNX3-202ENST00000349379 OR56B2PQ8NGI1 322 aa18.66■□□□□ 0.58
SNX3-202ENST00000349379 SPRYD4Q8WW59 207 aaPredicted RBP18.66■□□□□ 0.58
SNX3-202ENST00000349379 REEP6Q96HR9 211 aa18.66■□□□□ 0.58
SNX3-202ENST00000349379 SIGLEC11Q96RL6 698 aa18.66■□□□□ 0.58
SNX3-202ENST00000349379 MROQ9BYG7 248 aa18.66■□□□□ 0.58
SNX3-202ENST00000349379 OR10A2Q9H208 303 aa18.66■□□□□ 0.58
SNX3-202ENST00000349379 RGCCQ9H4X1 137 aa18.66■□□□□ 0.58
SNX3-202ENST00000349379 GCM1Q9NP62 436 aa18.66■□□□□ 0.58
SNX3-202ENST00000349379 YAE1D1Q9NRH1 226 aa18.66■□□□□ 0.58
SNX3-202ENST00000349379 TMEM106BQ9NUM4 274 aa18.66■□□□□ 0.58
SNX3-202ENST00000349379 MRPL15Q9P015 296 aaKnown RBP18.66■□□□□ 0.58
SNX3-202ENST00000349379 N6AMT1Q9Y5N5 214 aa18.66■□□□□ 0.58
SNX3-202ENST00000349379 A8MV72 311 aaPredicted RBP18.65■□□□□ 0.58
SNX3-202ENST00000349379 F5H5P2 479 aa18.65■□□□□ 0.58
SNX3-202ENST00000349379 PHYHO14832 338 aa18.65■□□□□ 0.58
SNX3-202ENST00000349379 BAG2O95816 211 aa18.65■□□□□ 0.58
SNX3-202ENST00000349379 CFL1P23528 166 aaKnown RBP18.65■□□□□ 0.58
SNX3-202ENST00000349379 DDOSTP39656 456 aa18.65■□□□□ 0.58
SNX3-202ENST00000349379 CD200P41217 278 aa18.65■□□□□ 0.58
SNX3-202ENST00000349379 GATA4P43694 442 aa18.65■□□□□ 0.58
SNX3-202ENST00000349379 SRP9P49458 86 aaKnown RBP18.65■□□□□ 0.58
SNX3-202ENST00000349379 LMO4P61968 165 aa18.65■□□□□ 0.58
SNX3-202ENST00000349379 SNRPGP62308 76 aaKnown RBP18.65■□□□□ 0.58
SNX3-202ENST00000349379 HNRNPA0Q13151 305 aaKnown RBP18.65■□□□□ 0.58
SNX3-202ENST00000349379 MAB21L1Q13394 359 aa18.65■□□□□ 0.58
SNX3-202ENST00000349379 OR51G2Q8NGK0 314 aa18.65■□□□□ 0.58
SNX3-202ENST00000349379 RAB1CQ92928 201 aa18.65■□□□□ 0.58
SNX3-202ENST00000349379 POM121Q96HA1 1249 aa18.65■□□□□ 0.58
SNX3-202ENST00000349379 PGAM5Q96HS1 289 aa18.65■□□□□ 0.58
SNX3-202ENST00000349379 FAM206AQ9NX38 181 aa18.65■□□□□ 0.58
SNX3-202ENST00000349379 IMPAD1Q9NX62 359 aa18.65■□□□□ 0.58
SNX3-202ENST00000349379 PPP1R3CQ9UQK1 317 aa18.65■□□□□ 0.58
SNX3-202ENST00000349379 NIPBLQ6KC79 2804 aaeCLIP18.65■□□□□ 0.58
SNX3-202ENST00000349379 NAV3Q8IVL0 2385 aa18.64■□□□□ 0.58
SNX3-202ENST00000349379 ACOD1A6NK06 481 aa18.64■□□□□ 0.57
SNX3-202ENST00000349379 PSMD9O00233 223 aa18.64■□□□□ 0.57
SNX3-202ENST00000349379 PTBP3O95758 552 aaKnown RBP18.64■□□□□ 0.57
SNX3-202ENST00000349379 MMP16P51512 607 aa18.64■□□□□ 0.57
SNX3-202ENST00000349379 CDH15P55291 814 aa18.64■□□□□ 0.57
SNX3-202ENST00000349379 CXCR4P61073 352 aa18.64■□□□□ 0.57
SNX3-202ENST00000349379 MVKQ03426 396 aa18.64■□□□□ 0.57
SNX3-202ENST00000349379 POU4F2Q12837 409 aa18.64■□□□□ 0.57
SNX3-202ENST00000349379 ZNF322Q6U7Q0 402 aaPredicted RBP18.64■□□□□ 0.57
SNX3-202ENST00000349379 OR8B12Q8NGG6 310 aa18.64■□□□□ 0.57
SNX3-202ENST00000349379 RFKQ969G6 155 aa18.64■□□□□ 0.57
SNX3-202ENST00000349379 TIMD4Q96H15 378 aa18.64■□□□□ 0.57
SNX3-202ENST00000349379 NARFLQ9H6Q4 476 aa18.64■□□□□ 0.57
SNX3-202ENST00000349379 BRD7Q9NPI1 651 aa18.64■□□□□ 0.57
SNX3-202ENST00000349379 TMEM160Q9NX00 188 aa18.64■□□□□ 0.57
SNX3-202ENST00000349379 NOP16Q9Y3C1 178 aaKnown RBP18.64■□□□□ 0.57
SNX3-202ENST00000349379 NPTNQ9Y639 398 aa18.64■□□□□ 0.57
SNX3-202ENST00000349379 DOCK11Q5JSL3 2073 aa18.63■□□□□ 0.57
SNX3-202ENST00000349379 ANKRD65E5RJM6 399 aa18.63■□□□□ 0.57
SNX3-202ENST00000349379 IFNL4K9M1U5 179 aa18.63■□□□□ 0.57
SNX3-202ENST00000349379 DLGAP1O14490 977 aa18.63■□□□□ 0.57
SNX3-202ENST00000349379 GMDSO60547 372 aa18.63■□□□□ 0.57
SNX3-202ENST00000349379 SRSF10O75494 262 aaKnown RBP18.63■□□□□ 0.57
SNX3-202ENST00000349379 IGHV2-70P01814 119 aa18.63■□□□□ 0.57
SNX3-202ENST00000349379 ANPEPP15144 967 aa18.63■□□□□ 0.57
SNX3-202ENST00000349379 GABRB1P18505 474 aa18.63■□□□□ 0.57
SNX3-202ENST00000349379 CA6P23280 308 aa18.63■□□□□ 0.57
SNX3-202ENST00000349379 RBMXP38159 391 aaKnown RBP18.63■□□□□ 0.57
SNX3-202ENST00000349379 EGR3Q06889 387 aa18.63■□□□□ 0.57
SNX3-202ENST00000349379 OR8B8Q15620 311 aa18.63■□□□□ 0.57
SNX3-202ENST00000349379 OCLNQ16625 522 aa18.63■□□□□ 0.57
SNX3-202ENST00000349379 ZNF181Q2M3W8 571 aa18.63■□□□□ 0.57
SNX3-202ENST00000349379 RDH12Q96NR8 316 aa18.63■□□□□ 0.57
SNX3-202ENST00000349379 TTTY10Q9BZA0 68 aa18.63■□□□□ 0.57
SNX3-202ENST00000349379 ZNF391Q9UJN7 358 aa18.63■□□□□ 0.57
SNX3-202ENST00000349379 LOC100289279A0A1B0GTE1 492 aa18.62■□□□□ 0.57
SNX3-202ENST00000349379 ZNF670-ZNF695F2Z2N8 137 aa18.62■□□□□ 0.57
SNX3-202ENST00000349379 IGLV3-1P01715 115 aa18.62■□□□□ 0.57
SNX3-202ENST00000349379 OR2T7P0C7T2 308 aa18.62■□□□□ 0.57
SNX3-202ENST00000349379 GSK3AP49840 483 aa18.62■□□□□ 0.57
SNX3-202ENST00000349379 RIDAP52758 137 aaKnown RBP18.62■□□□□ 0.57
SNX3-202ENST00000349379 RCN1Q15293 331 aa18.62■□□□□ 0.57
SNX3-202ENST00000349379 MEDAGQ5VYS4 303 aa18.62■□□□□ 0.57
SNX3-202ENST00000349379 FAM166AQ6J272 317 aa18.62■□□□□ 0.57
SNX3-202ENST00000349379 SSX6Q7RTT6 188 aa18.62■□□□□ 0.57
SNX3-202ENST00000349379 KLBQ86Z14 1044 aa18.62■□□□□ 0.57
SNX3-202ENST00000349379 LINC01356Q8N9X3 169 aa18.62■□□□□ 0.57
SNX3-202ENST00000349379 OR2T27Q8NH04 317 aa18.62■□□□□ 0.57
SNX3-202ENST00000349379 LYZL4Q96KX0 146 aa18.62■□□□□ 0.57
SNX3-202ENST00000349379 ADAT1Q9BUB4 502 aaKnown RBP18.62■□□□□ 0.57
SNX3-202ENST00000349379 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.62■□□□□ 0.57
SNX3-202ENST00000349379 GMPPBQ9Y5P6 360 aa18.62■□□□□ 0.57
SNX3-202ENST00000349379 ARHGAP32A7KAX9 2087 aa18.61■□□□□ 0.57
SNX3-202ENST00000349379 A0A0U1RQV5 110 aa18.61■□□□□ 0.57
SNX3-202ENST00000349379 TMEM269A0A1B0GVZ9 245 aa18.61■□□□□ 0.57
SNX3-202ENST00000349379 FAM157AC9JC47 383 aa18.61■□□□□ 0.57
SNX3-202ENST00000349379 TMEM178BH3BS89 294 aa18.61■□□□□ 0.57
SNX3-202ENST00000349379 SLC16A6O15403 523 aa18.61■□□□□ 0.57
SNX3-202ENST00000349379 ENTPD6O75354 484 aa18.61■□□□□ 0.57
SNX3-202ENST00000349379 CRLF1O75462 422 aa18.61■□□□□ 0.57
SNX3-202ENST00000349379 PMELP40967 661 aa18.61■□□□□ 0.57
SNX3-202ENST00000349379 OR8G1Q15617 311 aa18.61■□□□□ 0.57
SNX3-202ENST00000349379 PEG10Q86TG7 708 aaKnown RBP18.61■□□□□ 0.57
SNX3-202ENST00000349379 ZNF420Q8TAQ5 688 aaPredicted RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms