RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 TMPRSS11AQ6ZMR5 421 aa10.13□□□□□ -0.79
SNCA-202ENST00000345009 OR52I1Q8NGK6 324 aa10.13□□□□□ -0.79
SNCA-202ENST00000345009 OR13G1Q8NGZ3 307 aa10.13□□□□□ -0.79
SNCA-202ENST00000345009 TMEM80Q96HE8 168 aa10.13□□□□□ -0.79
SNCA-202ENST00000345009 EGLN1Q9GZT9 426 aa10.13□□□□□ -0.79
SNCA-202ENST00000345009 SLC22A4Q9H015 551 aa10.13□□□□□ -0.79
SNCA-202ENST00000345009 DECR2Q9NUI1 292 aa10.13□□□□□ -0.79
SNCA-202ENST00000345009 PLCXD1Q9NUJ7 323 aa10.13□□□□□ -0.79
SNCA-202ENST00000345009 CNOT2Q9NZN8 540 aaKnown RBP10.13□□□□□ -0.79
SNCA-202ENST00000345009 GNG8Q9UK08 70 aa10.13□□□□□ -0.79
SNCA-202ENST00000345009 GTF2A1LQ9UNN4 478 aa10.13□□□□□ -0.79
SNCA-202ENST00000345009 R4GMQ9 66 aa10.13□□□□□ -0.79
SNCA-202ENST00000345009 RAI1Q7Z5J4 1906 aaPredicted RBP10.13□□□□□ -0.79
SNCA-202ENST00000345009 A0A0U1RQV5 110 aa10.12□□□□□ -0.79
SNCA-202ENST00000345009 C17orf100A8MU93 164 aa10.12□□□□□ -0.79
SNCA-202ENST00000345009 J3QRE1 110 aa10.12□□□□□ -0.79
SNCA-202ENST00000345009 TPD52L2O43399 206 aaKnown RBP10.12□□□□□ -0.79
SNCA-202ENST00000345009 FAM20BO75063 409 aa10.12□□□□□ -0.79
SNCA-202ENST00000345009 MTRF1O75570 445 aaKnown RBP10.12□□□□□ -0.79
SNCA-202ENST00000345009 IGHA1P01876 353 aa10.12□□□□□ -0.79
SNCA-202ENST00000345009 ALDH3B1P43353 468 aa10.12□□□□□ -0.79
SNCA-202ENST00000345009 DSCR9P59020 149 aa10.12□□□□□ -0.79
SNCA-202ENST00000345009 MZT1Q08AG7 82 aa10.12□□□□□ -0.79
SNCA-202ENST00000345009 GALEQ14376 348 aa10.12□□□□□ -0.79
SNCA-202ENST00000345009 SMN1Q16637 294 aaKnown RBP10.12□□□□□ -0.79
SNCA-202ENST00000345009 SNAI3Q3KNW1 292 aa10.12□□□□□ -0.79
SNCA-202ENST00000345009 C6orf141Q5SZD1 244 aa10.12□□□□□ -0.79
SNCA-202ENST00000345009 BCL2L15Q5TBC7 163 aa10.12□□□□□ -0.79
SNCA-202ENST00000345009 LIPNQ5VXI9 398 aa10.12□□□□□ -0.79
SNCA-202ENST00000345009 OR2T2Q6IF00 324 aa10.12□□□□□ -0.79
SNCA-202ENST00000345009 LHFPL3Q86UP9 236 aa10.12□□□□□ -0.79
SNCA-202ENST00000345009 COMMD2Q86X83 199 aa10.12□□□□□ -0.79
SNCA-202ENST00000345009 SYS1Q8N2H4 156 aa10.12□□□□□ -0.79
SNCA-202ENST00000345009 STX19Q8N4C7 294 aa10.12□□□□□ -0.79
SNCA-202ENST00000345009 CSNK2A3Q8NEV1 391 aa10.12□□□□□ -0.79
SNCA-202ENST00000345009 BPIFB6Q8NFQ5 453 aa10.12□□□□□ -0.79
SNCA-202ENST00000345009 OR8G5Q8NG78 346 aa10.12□□□□□ -0.79
SNCA-202ENST00000345009 FBLIM1Q8WUP2 373 aa10.12□□□□□ -0.79
SNCA-202ENST00000345009 MYDGFQ969H8 173 aa10.12□□□□□ -0.79
SNCA-202ENST00000345009 SPSB4Q96A44 273 aa10.12□□□□□ -0.79
SNCA-202ENST00000345009 REEP6Q96HR9 211 aa10.12□□□□□ -0.79
SNCA-202ENST00000345009 ALG8Q9BVK2 526 aa10.12□□□□□ -0.79
SNCA-202ENST00000345009 TTTY10Q9BZA0 68 aa10.12□□□□□ -0.79
SNCA-202ENST00000345009 PBOV1Q9GZY1 135 aa10.12□□□□□ -0.79
SNCA-202ENST00000345009 FGF20Q9NP95 211 aaPredicted RBP10.12□□□□□ -0.79
SNCA-202ENST00000345009 MYOZ1Q9NP98 299 aaPredicted RBP10.12□□□□□ -0.79
SNCA-202ENST00000345009 TMEM100Q9NV29 134 aa10.12□□□□□ -0.79
SNCA-202ENST00000345009 NKIRAS2Q9NYR9 191 aa10.12□□□□□ -0.79
SNCA-202ENST00000345009 MRM2Q9UI43 246 aaKnown RBP10.12□□□□□ -0.79
SNCA-202ENST00000345009 DIMT1Q9UNQ2 313 aaKnown RBP10.12□□□□□ -0.79
SNCA-202ENST00000345009 EXOSC1Q9Y3B2 195 aaKnown RBP10.12□□□□□ -0.79
SNCA-202ENST00000345009 TPRKBQ9Y3C4 175 aa10.12□□□□□ -0.79
SNCA-202ENST00000345009 ANKRD30BLA7E2S9 258 aa10.11□□□□□ -0.79
SNCA-202ENST00000345009 CD300LBA8K4G0 201 aa10.11□□□□□ -0.79
SNCA-202ENST00000345009 IQCF6A8MYZ5 107 aa10.11□□□□□ -0.79
SNCA-202ENST00000345009 J3QLW9 94 aa10.11□□□□□ -0.79
SNCA-202ENST00000345009 RPP14O95059 124 aaKnown RBP10.11□□□□□ -0.79
SNCA-202ENST00000345009 CSF3P09919 207 aa10.11□□□□□ -0.79
SNCA-202ENST00000345009 NAT2P11245 290 aa10.11□□□□□ -0.79
SNCA-202ENST00000345009 PIPP12273 146 aaPredicted RBP10.11□□□□□ -0.79
SNCA-202ENST00000345009 ATP6V1B1P15313 513 aa10.11□□□□□ -0.79
SNCA-202ENST00000345009 ZNF19P17023 458 aa10.11□□□□□ -0.79
SNCA-202ENST00000345009 GBX2P52951 348 aaPredicted RBP10.11□□□□□ -0.79
SNCA-202ENST00000345009 ZNF85Q03923 595 aa10.11□□□□□ -0.79
SNCA-202ENST00000345009 ZNF92Q03936 586 aa10.11□□□□□ -0.79
SNCA-202ENST00000345009 ST3GAL4Q11206 333 aa10.11□□□□□ -0.79
SNCA-202ENST00000345009 MSMPQ1L6U9 139 aa10.11□□□□□ -0.79
SNCA-202ENST00000345009 GFOD2Q3B7J2 385 aa10.11□□□□□ -0.79
SNCA-202ENST00000345009 ALKBH6Q3KRA9 238 aa10.11□□□□□ -0.79
SNCA-202ENST00000345009 CDONQ4KMG0 1287 aa10.11□□□□□ -0.79
SNCA-202ENST00000345009 GLYATL3Q5SZD4 288 aa10.11□□□□□ -0.79
SNCA-202ENST00000345009 ZNF684Q5T5D7 378 aa10.11□□□□□ -0.79
SNCA-202ENST00000345009 SSX6Q7RTT6 188 aa10.11□□□□□ -0.79
SNCA-202ENST00000345009 PRSS45Q7RTY3 260 aa10.11□□□□□ -0.79
SNCA-202ENST00000345009 ZNF540Q8NDQ6 660 aa10.11□□□□□ -0.79
SNCA-202ENST00000345009 OR2AE1Q8NHA4 323 aa10.11□□□□□ -0.79
SNCA-202ENST00000345009 SGK3Q96BR1 496 aa10.11□□□□□ -0.79
SNCA-202ENST00000345009 SIGLEC11Q96RL6 698 aa10.11□□□□□ -0.79
SNCA-202ENST00000345009 JAM3Q9BX67 310 aa10.11□□□□□ -0.79
SNCA-202ENST00000345009 FAM206AQ9NX38 181 aa10.11□□□□□ -0.79
SNCA-202ENST00000345009 ERVK13-1Q9NX77 482 aa10.11□□□□□ -0.79
SNCA-202ENST00000345009 MYEF2Q9P2K5 600 aaKnown RBP10.11□□□□□ -0.79
SNCA-202ENST00000345009 NUFIP1Q9UHK0 495 aaKnown RBP10.11□□□□□ -0.79
SNCA-202ENST00000345009 OR52A1Q9UKL2 312 aa10.11□□□□□ -0.79
SNCA-202ENST00000345009 BLOC1S6Q9UL45 172 aa10.11□□□□□ -0.79
SNCA-202ENST00000345009 MYRFQ9Y2G1 1151 aa10.11□□□□□ -0.79
SNCA-202ENST00000345009 ITPR3Q14573 2671 aa10.11□□□□□ -0.79
SNCA-202ENST00000345009 PRRC2AP48634 2157 aaKnown RBP10.11□□□□□ -0.79
SNCA-202ENST00000345009 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.1□□□□□ -0.79
SNCA-202ENST00000345009 MAGEB4O15481 346 aaPredicted RBP10.1□□□□□ -0.79
SNCA-202ENST00000345009 SPRY3O43610 288 aa10.1□□□□□ -0.79
SNCA-202ENST00000345009 SSX4O60224 188 aa10.1□□□□□ -0.79
SNCA-202ENST00000345009 CCDC159P0C7I6 412 aa10.1□□□□□ -0.79
SNCA-202ENST00000345009 TNFRSF1AP19438 455 aa10.1□□□□□ -0.79
SNCA-202ENST00000345009 GNALP38405 381 aa10.1□□□□□ -0.79
SNCA-202ENST00000345009 MAP2K3P46734 347 aa10.1□□□□□ -0.79
SNCA-202ENST00000345009 MMP15P51511 669 aa10.1□□□□□ -0.79
SNCA-202ENST00000345009 TP53I3Q53FA7 332 aa10.1□□□□□ -0.79
SNCA-202ENST00000345009 Q5PR19 223 aa10.1□□□□□ -0.79
SNCA-202ENST00000345009 CLEC2AQ6UVW9 174 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms